Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
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Accession | NC_002678 |
Length | 7,036,071 |
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The map label for this gene is aroH [H]
Identifier: 13470978
GI number: 13470978
Start: 654855
End: 656228
Strand: Reverse
Name: aroH [H]
Synonym: mll0826
Alternate gene names: 13470978
Gene position: 656228-654855 (Counterclockwise)
Preceding gene: 13470979
Following gene: 13470976
Centisome position: 9.33
GC content: 63.68
Gene sequence:
>1374_bases ATGACGAAATGGTCGCCGAATTCGTGGAGAGCAAAGCCGATCAAGCAGGTTCCTGCCTATCCGGACCTTGCCGCGCTGAA GAACACCGAAGCCCAGCTCGCCACCTTCCCGCCATTGGTCTTTGCCGGTGAGGCACGCAAGCTGAAGAAGCAGCTCGCGG CCGTCGCTGCCGGCGAAGCCTTCCTGCTCCAGGGCGGCGATTGCGCCGAGAGCTTTGCCGAGCATGGCGCCGACAACATC CGCGACTTCTTCCGTGTCTTCCTGCAGATGTCGGTCGTGCTGACCTTCGCTGGCGCGCAGCCGGTGGTGAAGGTCGGACG CGTCGCCGGCCAGTTCGCCAAGCCGCGCTCGTCCGACAATGAGACCAAGGGCGAGGTGACGCTGCCGAGCTATCGCGGCG ACATCATCAACGGCATCGAATTCGACGCCAAATCGCGTATTCCGGATCCCGCACGCCAGGAAATGGCCTATCGCCAGTCG GCGGCGACGCTCAACCTTCTGCGCGCCTTCGCGCAGGGCGGCTATGCCAACCTGGAGAATGTGCATAGCTGGATGCTCGG CTTCGTCTCCGACAGCCCGCAGGGCGAGAAATACGAGTCGCTCGCCAACCGCATCACCGAGACGATGGACTTCATGAAGG CCGTCGGCATCACTTCGGAAACCAATTATGCGCTGCGCGAGACCGATTTCTACACCAGCCACGAGGCCTTGCTGCTCGGT TATGAGGAAGCACTGACCCGCGTTGATTCGACCTCCGGCGACTGGTATGCCACGTCAGGCCATATGATCTGGATCGGCGA CCGCACGCGCCAGCCCGATCATGCCCATGTCGAGTATTGCCGCGGCATCAAGAACCCGCTCGGCCTGAAATGCGGCCCGT CGCTGACCGCTGACGGCTTGCTGGAGCTGATCGACCTGCTCAACCCCGAGAACGAGCCCGGCCGGCTGACGCTGATCGCC CGCTTTGGTTCGGACAAGGTCGCCGACCATCTGCCGAAGCTGGTGCGCGCGGTGCAGAAGGAAGGCCGCAGCGTGGTCTG GTCGTCGGACCCGATGCATGGCAACACGATCGAGGCGGCCGGCTACAAGACGCGGCCGTTCGACCGCATCCTGAAGGAAG TGCAGACCTTCTTCGAGGTGCACCGCGCCGAAGGCACGCATCCGGGCGGCATCCATGTCGAGATGACCGGCAAGAACGTC ACCGAATGCACGGGCGGCGCGCGCGCCATCACGGCCGAGGAATTGCAGGACCGCTACCACACCCATTGCGACCCGCGCCT CAATGCCGACCAGGCGATCGAACTGGCCTTCCTGGTGTCGGACCTCTTGAAGAAGAGCCATCCGGTGCAGCACAGGCAGG CCGTCAACGGCTGA
Upstream 100 bases:
>100_bases CTAGAATAGGAAATCGGCTTCGTGTATGGGAGCCGCCAACCCATATAGGGGCGGAAATGGCGGGCGAGGGTGCCCGCCGG AAAGAGTGTTGGGTGCAGCG
Downstream 100 bases:
>100_bases TACCGACCAATGACCCGATTAAGGAAAGGCGCTGGAGAAATCCGGCGCCTTCTTCGTTTTAGCTCACGTTTGTGTTCTCG GCAGCTGCCAGCGCGATCAG
Product: 2-dehydro-3-deoxyphosphoheptonate aldolase
Products: NA
Alternate protein names: 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase; DAHP synthase; Phospho-2-keto-3-deoxyheptonate aldolase [H]
Number of amino acids: Translated: 457; Mature: 456
Protein sequence:
>457_residues MTKWSPNSWRAKPIKQVPAYPDLAALKNTEAQLATFPPLVFAGEARKLKKQLAAVAAGEAFLLQGGDCAESFAEHGADNI RDFFRVFLQMSVVLTFAGAQPVVKVGRVAGQFAKPRSSDNETKGEVTLPSYRGDIINGIEFDAKSRIPDPARQEMAYRQS AATLNLLRAFAQGGYANLENVHSWMLGFVSDSPQGEKYESLANRITETMDFMKAVGITSETNYALRETDFYTSHEALLLG YEEALTRVDSTSGDWYATSGHMIWIGDRTRQPDHAHVEYCRGIKNPLGLKCGPSLTADGLLELIDLLNPENEPGRLTLIA RFGSDKVADHLPKLVRAVQKEGRSVVWSSDPMHGNTIEAAGYKTRPFDRILKEVQTFFEVHRAEGTHPGGIHVEMTGKNV TECTGGARAITAEELQDRYHTHCDPRLNADQAIELAFLVSDLLKKSHPVQHRQAVNG
Sequences:
>Translated_457_residues MTKWSPNSWRAKPIKQVPAYPDLAALKNTEAQLATFPPLVFAGEARKLKKQLAAVAAGEAFLLQGGDCAESFAEHGADNI RDFFRVFLQMSVVLTFAGAQPVVKVGRVAGQFAKPRSSDNETKGEVTLPSYRGDIINGIEFDAKSRIPDPARQEMAYRQS AATLNLLRAFAQGGYANLENVHSWMLGFVSDSPQGEKYESLANRITETMDFMKAVGITSETNYALRETDFYTSHEALLLG YEEALTRVDSTSGDWYATSGHMIWIGDRTRQPDHAHVEYCRGIKNPLGLKCGPSLTADGLLELIDLLNPENEPGRLTLIA RFGSDKVADHLPKLVRAVQKEGRSVVWSSDPMHGNTIEAAGYKTRPFDRILKEVQTFFEVHRAEGTHPGGIHVEMTGKNV TECTGGARAITAEELQDRYHTHCDPRLNADQAIELAFLVSDLLKKSHPVQHRQAVNG >Mature_456_residues TKWSPNSWRAKPIKQVPAYPDLAALKNTEAQLATFPPLVFAGEARKLKKQLAAVAAGEAFLLQGGDCAESFAEHGADNIR DFFRVFLQMSVVLTFAGAQPVVKVGRVAGQFAKPRSSDNETKGEVTLPSYRGDIINGIEFDAKSRIPDPARQEMAYRQSA ATLNLLRAFAQGGYANLENVHSWMLGFVSDSPQGEKYESLANRITETMDFMKAVGITSETNYALRETDFYTSHEALLLGY EEALTRVDSTSGDWYATSGHMIWIGDRTRQPDHAHVEYCRGIKNPLGLKCGPSLTADGLLELIDLLNPENEPGRLTLIAR FGSDKVADHLPKLVRAVQKEGRSVVWSSDPMHGNTIEAAGYKTRPFDRILKEVQTFFEVHRAEGTHPGGIHVEMTGKNVT ECTGGARAITAEELQDRYHTHCDPRLNADQAIELAFLVSDLLKKSHPVQHRQAVNG
Specific function: Unknown
COG id: COG3200
COG function: function code E; 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-II DAHP synthase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002480 [H]
Pfam domain/function: PF01474 DAHP_synth_2 [H]
EC number: =2.5.1.54 [H]
Molecular weight: Translated: 50450; Mature: 50319
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKWSPNSWRAKPIKQVPAYPDLAALKNTEAQLATFPPLVFAGEARKLKKQLAAVAAGEA CCCCCCCCCCCCCHHHCCCCCCHHHHCCCCCHHHHCCCEEECCCHHHHHHHHHHHHCCCE FLLQGGDCAESFAEHGADNIRDFFRVFLQMSVVLTFAGAQPVVKVGRVAGQFAKPRSSDN EEEECCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCC ETKGEVTLPSYRGDIINGIEFDAKSRIPDPARQEMAYRQSAATLNLLRAFAQGGYANLEN CCCCCEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH VHSWMLGFVSDSPQGEKYESLANRITETMDFMKAVGITSETNYALRETDFYTSHEALLLG HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCHHEEE YEEALTRVDSTSGDWYATSGHMIWIGDRTRQPDHAHVEYCRGIKNPLGLKCGPSLTADGL HHHHHHHHCCCCCCEEEECCEEEEEECCCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHH LELIDLLNPENEPGRLTLIARFGSDKVADHLPKLVRAVQKEGRSVVWSSDPMHGNTIEAA HHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHCCCEEEECCCCCCCCEEECC GYKTRPFDRILKEVQTFFEVHRAEGTHPGGIHVEMTGKNVTECTGGARAITAEELQDRYH CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHCCCCCEEEHHHHHHHHH THCDPRLNADQAIELAFLVSDLLKKSHPVQHRQAVNG CCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHCCC >Mature Secondary Structure TKWSPNSWRAKPIKQVPAYPDLAALKNTEAQLATFPPLVFAGEARKLKKQLAAVAAGEA CCCCCCCCCCCCHHHCCCCCCHHHHCCCCCHHHHCCCEEECCCHHHHHHHHHHHHCCCE FLLQGGDCAESFAEHGADNIRDFFRVFLQMSVVLTFAGAQPVVKVGRVAGQFAKPRSSDN EEEECCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCC ETKGEVTLPSYRGDIINGIEFDAKSRIPDPARQEMAYRQSAATLNLLRAFAQGGYANLEN CCCCCEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH VHSWMLGFVSDSPQGEKYESLANRITETMDFMKAVGITSETNYALRETDFYTSHEALLLG HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCHHEEE YEEALTRVDSTSGDWYATSGHMIWIGDRTRQPDHAHVEYCRGIKNPLGLKCGPSLTADGL HHHHHHHHCCCCCCEEEECCEEEEEECCCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHH LELIDLLNPENEPGRLTLIARFGSDKVADHLPKLVRAVQKEGRSVVWSSDPMHGNTIEAA HHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHCCCEEEECCCCCCCCEEECC GYKTRPFDRILKEVQTFFEVHRAEGTHPGGIHVEMTGKNVTECTGGARAITAEELQDRYH CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHCCCCCEEEHHHHHHHHH THCDPRLNADQAIELAFLVSDLLKKSHPVQHRQAVNG CCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12000953; 8760910 [H]