Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
---|---|
Accession | NC_002678 |
Length | 7,036,071 |
Click here to switch to the map view.
The map label for this gene is 13470956
Identifier: 13470956
GI number: 13470956
Start: 630228
End: 630821
Strand: Reverse
Name: 13470956
Synonym: mll0797
Alternate gene names: NA
Gene position: 630821-630228 (Counterclockwise)
Preceding gene: 13470957
Following gene: 13470953
Centisome position: 8.97
GC content: 64.31
Gene sequence:
>594_bases ATGAAAACGGGTGGATTGACACCGGCTGCGGCGCTGCTTGCGCTATCGCTTGCCGGCTGTGCGGTACTGGGTGGCAAGCC TGCGCCGCTCGACACATTCGAGCTTTCGGCGCCGTCGGTTGACGCCCATGGCCATAGCCGCAAGCAAATCCTGATCGCCC AGCCCTCGGCGCTCAAGGCGCTGGACAGCCAGAACATCGTCATCAAACCCTCCGACCGCTCGATCCAGTATCTCAAGGGC GCGCAATGGGCCGACCGCCTGCCGCTGATCGTGCAGGCGCGGCTGGCGGAGACCTTCCAGCGCTCCGGCAGCTTTGCCGG CGTCGGCAAGCCGGGCGAGGGCCTGGCGATCGACTACCAGGTGATCGTCGAGATTCGTTCCTTCGAAGTGAGTGTCGACG GCGGCGAACATGCCGAGGTCGACCTGTTCGTGCGCCTGCTCAACGATCGCAACGGCGAGGTGCGCGCTTCCAAGAGCTTC ACCGCGTCCGCGCCTGTTTCGGGCAGCGGCAATCCAGCCTACATCAAAGCGCTCGACAGTGCCTTCGGCGATGCCGCCAA ACAGATCGTTCGCTGGACGGATTCGGTGATCTGA
Upstream 100 bases:
>100_bases CGTTGACTTCGGCGCCTGCTCGCCCCAAGAACATGAGCTGCGGATGCGGGTTGATCTTACGATCCGGGGACAACGGGGAT CGCGCGTGAAGTCGGTGTGG
Downstream 100 bases:
>100_bases GCGATCTCCAAGAGGCTTTCTGAGACCTCAGCGCCGCCCCTCATTGCCCTGCCGGGCGTTCGTCACTCGAAAAGCCAAGC AATTGGCTTTTCGTCCGCTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 197; Mature: 197
Protein sequence:
>197_residues MKTGGLTPAAALLALSLAGCAVLGGKPAPLDTFELSAPSVDAHGHSRKQILIAQPSALKALDSQNIVIKPSDRSIQYLKG AQWADRLPLIVQARLAETFQRSGSFAGVGKPGEGLAIDYQVIVEIRSFEVSVDGGEHAEVDLFVRLLNDRNGEVRASKSF TASAPVSGSGNPAYIKALDSAFGDAAKQIVRWTDSVI
Sequences:
>Translated_197_residues MKTGGLTPAAALLALSLAGCAVLGGKPAPLDTFELSAPSVDAHGHSRKQILIAQPSALKALDSQNIVIKPSDRSIQYLKG AQWADRLPLIVQARLAETFQRSGSFAGVGKPGEGLAIDYQVIVEIRSFEVSVDGGEHAEVDLFVRLLNDRNGEVRASKSF TASAPVSGSGNPAYIKALDSAFGDAAKQIVRWTDSVI >Mature_197_residues MKTGGLTPAAALLALSLAGCAVLGGKPAPLDTFELSAPSVDAHGHSRKQILIAQPSALKALDSQNIVIKPSDRSIQYLKG AQWADRLPLIVQARLAETFQRSGSFAGVGKPGEGLAIDYQVIVEIRSFEVSVDGGEHAEVDLFVRLLNDRNGEVRASKSF TASAPVSGSGNPAYIKALDSAFGDAAKQIVRWTDSVI
Specific function: Unknown
COG id: COG3218
COG function: function code R; ABC-type uncharacterized transport system, auxiliary component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20710; Mature: 20710
Theoretical pI: Translated: 7.60; Mature: 7.60
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTGGLTPAAALLALSLAGCAVLGGKPAPLDTFELSAPSVDAHGHSRKQILIAQPSALKA CCCCCCCHHHHHHHHHHHHHHEECCCCCCCCEEECCCCCCCCCCCCCCEEEEECCHHHHH LDSQNIVIKPSDRSIQYLKGAQWADRLPLIVQARLAETFQRSGSFAGVGKPGEGLAIDYQ CCCCCEEECCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEHE VIVEIRSFEVSVDGGEHAEVDLFVRLLNDRNGEVRASKSFTASAPVSGSGNPAYIKALDS EEEEEEEEEEEECCCCCCHHHHHHEEHHCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHH AFGDAAKQIVRWTDSVI HHHHHHHHHHHHHHCCC >Mature Secondary Structure MKTGGLTPAAALLALSLAGCAVLGGKPAPLDTFELSAPSVDAHGHSRKQILIAQPSALKA CCCCCCCHHHHHHHHHHHHHHEECCCCCCCCEEECCCCCCCCCCCCCCEEEEECCHHHHH LDSQNIVIKPSDRSIQYLKGAQWADRLPLIVQARLAETFQRSGSFAGVGKPGEGLAIDYQ CCCCCEEECCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEHE VIVEIRSFEVSVDGGEHAEVDLFVRLLNDRNGEVRASKSFTASAPVSGSGNPAYIKALDS EEEEEEEEEEEECCCCCCHHHHHHEEHHCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHH AFGDAAKQIVRWTDSVI HHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA