Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
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Accession | NC_002678 |
Length | 7,036,071 |
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The map label for this gene is 13470941
Identifier: 13470941
GI number: 13470941
Start: 611239
End: 611799
Strand: Direct
Name: 13470941
Synonym: mlr0777
Alternate gene names: NA
Gene position: 611239-611799 (Clockwise)
Preceding gene: 13470940
Following gene: 13470945
Centisome position: 8.69
GC content: 62.75
Gene sequence:
>561_bases GTGTCGTCGATGAAAAGCGTAATTCTGTCCAGCGTCTTGCCCCTGGCCGTTGCAATCACAGCAGTCGTCGGCCTCGCCTC GCGGGCTTCCGCCGCAGAGCCGGACAAGCAGTTCTTCCAGTCGGCCGAAGGCAAATGGGTCGGCCCGGGCGAAATCGTCG CCGGCAAGTACAAGGGCACGAAATTCAACTGCAGCTTTACCGGCTCCACGCCGGACGGCACGATGGGCATGACACTGGAT GGCGGCTGCCGGGTCGGCATGTTCACCCAGCCGATGTCGGCCAAGATCGAGCGCAAGGGCCGCGACTACAAGGGCTCTTT CATGGGTGGCTCTGCCGGTGCAGGCCTCGACATCATCGGCGGCAACGTCGTCGATGCCCGCAAGGTGGTCTTTACCATCA ACCGCAATCAGTTGCGTGGCGTCATGCAAGCCCGCATTCCCGACGACAATTCGATGACCGTGACGGTTGCCGTGCGTGTC CAGGACCAGCTGGTGCCGGTCATCGGCATGAGCCTGAAGCGCGTCGATGCGGTCGAAGTCGGCTCCATCGCCCCGAACTG A
Upstream 100 bases:
>100_bases GGACGATGAGCGGATTGCCGTTTCAAGGCTTCGCAGTGACGAAGCATTAACCAATCTTCTTCATGGTCGAACCGGTTCCA AACAGCCTCTTTGTTGCCGG
Downstream 100 bases:
>100_bases GCGCGTTAGCGCCCCTGACACGTCCCCCCAAAGCAAAGAGGCGGCAGCCCATCGCCACCGCCTCCTTGAACCAGTCGAAT CAGGCGCTTAGCCCTTGATG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 186; Mature: 185
Protein sequence:
>186_residues MSSMKSVILSSVLPLAVAITAVVGLASRASAAEPDKQFFQSAEGKWVGPGEIVAGKYKGTKFNCSFTGSTPDGTMGMTLD GGCRVGMFTQPMSAKIERKGRDYKGSFMGGSAGAGLDIIGGNVVDARKVVFTINRNQLRGVMQARIPDDNSMTVTVAVRV QDQLVPVIGMSLKRVDAVEVGSIAPN
Sequences:
>Translated_186_residues MSSMKSVILSSVLPLAVAITAVVGLASRASAAEPDKQFFQSAEGKWVGPGEIVAGKYKGTKFNCSFTGSTPDGTMGMTLD GGCRVGMFTQPMSAKIERKGRDYKGSFMGGSAGAGLDIIGGNVVDARKVVFTINRNQLRGVMQARIPDDNSMTVTVAVRV QDQLVPVIGMSLKRVDAVEVGSIAPN >Mature_185_residues SSMKSVILSSVLPLAVAITAVVGLASRASAAEPDKQFFQSAEGKWVGPGEIVAGKYKGTKFNCSFTGSTPDGTMGMTLDG GCRVGMFTQPMSAKIERKGRDYKGSFMGGSAGAGLDIIGGNVVDARKVVFTINRNQLRGVMQARIPDDNSMTVTVAVRVQ DQLVPVIGMSLKRVDAVEVGSIAPN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19462; Mature: 19331
Theoretical pI: Translated: 10.14; Mature: 10.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 5.4 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 4.9 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSMKSVILSSVLPLAVAITAVVGLASRASAAEPDKQFFQSAEGKWVGPGEIVAGKYKGT CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCCCEEEECCCCC KFNCSFTGSTPDGTMGMTLDGGCRVGMFTQPMSAKIERKGRDYKGSFMGGSAGAGLDIIG EEEEEECCCCCCCEEEEEECCCEEEEEECCCHHHHHHHCCCCCCCCCCCCCCCCCEEEEC GNVVDARKVVFTINRNQLRGVMQARIPDDNSMTVTVAVRVQDQLVPVIGMSLKRVDAVEV CCEECCEEEEEEECHHHHHHHHHHCCCCCCCEEEEEEEEECCCCHHHHCCCHHHCCEEEC GSIAPN CCCCCC >Mature Secondary Structure SSMKSVILSSVLPLAVAITAVVGLASRASAAEPDKQFFQSAEGKWVGPGEIVAGKYKGT CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCCCEEEECCCCC KFNCSFTGSTPDGTMGMTLDGGCRVGMFTQPMSAKIERKGRDYKGSFMGGSAGAGLDIIG EEEEEECCCCCCCEEEEEECCCEEEEEECCCHHHHHHHCCCCCCCCCCCCCCCCCEEEEC GNVVDARKVVFTINRNQLRGVMQARIPDDNSMTVTVAVRVQDQLVPVIGMSLKRVDAVEV CCEECCEEEEEEECHHHHHHHHHHCCCCCCCEEEEEEEEECCCCHHHHCCCHHHCCEEEC GSIAPN CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA