Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
---|---|
Accession | NC_002678 |
Length | 7,036,071 |
Click here to switch to the map view.
The map label for this gene is 13470933
Identifier: 13470933
GI number: 13470933
Start: 600720
End: 602633
Strand: Direct
Name: 13470933
Synonym: mlr0764
Alternate gene names: NA
Gene position: 600720-602633 (Clockwise)
Preceding gene: 13470932
Following gene: 13470936
Centisome position: 8.54
GC content: 63.53
Gene sequence:
>1914_bases ATGGCCAATTCCCCGTCTTCATCCTCCCCTGTCATTCGCGAAATCATCGCCGAGCGCGTCTCGCGCCGGTCCCTACTGAA AGGCAGCCTGGCATCTGGCGCCGTGATCGCCGGCGGCAGCTTTGTCGGCTCGTTGTTTGCCGGCGAAACGCATGCGGCTG CTGCACTTTCCACCCTCGGTTTTTCCGAACTGAAGCGCGTCTACGACAAGACCCACGCCGCTGCCGAGGGTTATGAAACC ACGATCGTCGCCCGCTGGGGCGATCCGCTTGTCGCCGGCCTGCTGGATTTCGACGGCAACAAGGTCGCTGCCGACGAGCA GGACAAGCGTTTCGGCTACAATTGCGACTACATCGCCTTCCTGCCACTGCCCAAGGGTTCGGTGAACTCCGACCACGGCC TGCTTTGCGTCAACAACGAATACATCTCACCCAATGTGATGTTCCCCGGCATGACCGAGGACGGCGCCGGCAAGGCGATG AGCAAGGAACAGGTCGATCTCGGCCTGGCGGCGATGGGCCATTCGATCGTCGAAATCATGCTCAAGGACGGCAAGTGGCA AACCGTCGAGGACAGCCCGCTCAACCGCCGCGTCACGGCCAACACCGAAATGGCTGTTTCGGGACCGGTGGCCGGCCATG CCTTGATGAAGACCTCCGCCGATGCGACCGGCACGAAGGTGCTCGGCACCAGTTACAATTGCAGCGGCGGCTTCACCCCC TGGGGCACTGTGCTGACCTGCGAGGAAGGCGTTTCCGACCTGTTCGGCGGCGACCCGAAAAAGGCGCCGACCGCCGATAT TCTCGATCGCTACGGCTTCGATGGCTCCGACATCTACGGCCGTGGCCGTTTCCACGACCGCTTCAACATCGACAAGGAAC CGAATGAGCCGAACCGCTTCGACTGGGTGGTCGAGATCGACCCCTATGATCCCAGGTCGAGGCCGGTGAAACGCACGGCC CTTGGCCGCATGTCGCATGAGGCCTCTACGGTCGTCCTCAACAAGGACGGTCGCATCGTCGTCTACATGGGCGACGACGA CTATTTCGAATACATGTACCGCTACGTCTCGAACAAGGCTTACGACAAGACGAACCCGGCTTCCAGCAACGGCCTTCTCG ATGATGGCGTGCTCTCGGTTGCCCGTTACGACGCCGACGGCTCGATGACATGGCTGCCGCTGGTCCACGGCCAGGGCAAG CTCACGGCGGAAAACGGTTTTGCCGACCAGGCCGACGTGCTGTTGAAGACGCGCCTTGCCGCCGACGCGCTCGGTGCGAC CCCGATGGACCGGCCGGAGGACATCGAGACCAATCCGGTTACCGGCCGCGTCTACGCCGTCATGACCAAGAACAAGAAGC GCGACGAATCCAAGGTCAACCCGGCCAATACGCGACCCGAAAACCTCTGGGGCCACATCGTCGAGCTGATCCCGCCAGGC GGCCGCGGCATCGAGGCCGACCACACCGCCGACAAATACGCCTGGGACCTGTTCGTGCTCTGCGGCAATCCCAAGGACGC CAAAGTCGGCGCCACCTTCCATCCCGACACGTCGGACAATGGCTGGTTCGTCTGCCCCGACAACATCACATTCGATCCGG CCGGGCGGCTGTGGGTGGCGACCGACGGCGCCAATGATTTCGACCTGCCCGACGGCGTCTATGGCGTCGACACGGAAGGC CCGACGCGCGGCCTGCCAAAGCTGCTGTTCACCTGCCCGCATGGCGCCGAAGCGACCGGCCCTTGCTTCACCCCGGATGG CACGACGCTGTTCCTTTCGGTCCAGCATCCCTCCGAAGATGCCGAGACGCTCGACAAGGCGCAGTCGCTGTGGCCCGATT TCAAGGACGGCCAGCCGCCGCGGCCATCGGTCGTCGCCATCCGCCGCAAGGACGGCCAACCGGTTGGGGCCTGA
Upstream 100 bases:
>100_bases TACGGACCACAAGCCGTGTCGCCCTCTCGTGTCATCTGGATGTAGCCGAAGCTGGATAGGCAGCGGTGCGCCGTCACCAT CCACATCGAGAGGCAGACAC
Downstream 100 bases:
>100_bases GACTGCGAGATTCAAAAGGCGCGGAACCCGGGGCGGGTCCCGCGCCGGCGGCAGGCGGCCTAGCGCCCTTCCCCAGCGAT TTCGAGCGCCAGCCGGCTCA
Product: hypothetical protein
Products: NA
Alternate protein names: Phosphatase; Tat Pathway Signal Sequence Domain-Containing Protein; Tat Pathway Signal Sequence Domain Protein; Twin-Arginine Translocation Pathway Signal Protein; UxpB Protein; DTDP-Glucose 4 6-Dehydratase; Twin Arginine Translocation Pathway Signal Protein; Phosphatase-Like Protein; DTDP-D-Glucose 4 6-Dehydratase; Glutamate-Cysteine Ligase/Putative Amino Acid Ligase; Alkaline Phosphatase Family Protein; Exported Protein
Number of amino acids: Translated: 637; Mature: 636
Protein sequence:
>637_residues MANSPSSSSPVIREIIAERVSRRSLLKGSLASGAVIAGGSFVGSLFAGETHAAAALSTLGFSELKRVYDKTHAAAEGYET TIVARWGDPLVAGLLDFDGNKVAADEQDKRFGYNCDYIAFLPLPKGSVNSDHGLLCVNNEYISPNVMFPGMTEDGAGKAM SKEQVDLGLAAMGHSIVEIMLKDGKWQTVEDSPLNRRVTANTEMAVSGPVAGHALMKTSADATGTKVLGTSYNCSGGFTP WGTVLTCEEGVSDLFGGDPKKAPTADILDRYGFDGSDIYGRGRFHDRFNIDKEPNEPNRFDWVVEIDPYDPRSRPVKRTA LGRMSHEASTVVLNKDGRIVVYMGDDDYFEYMYRYVSNKAYDKTNPASSNGLLDDGVLSVARYDADGSMTWLPLVHGQGK LTAENGFADQADVLLKTRLAADALGATPMDRPEDIETNPVTGRVYAVMTKNKKRDESKVNPANTRPENLWGHIVELIPPG GRGIEADHTADKYAWDLFVLCGNPKDAKVGATFHPDTSDNGWFVCPDNITFDPAGRLWVATDGANDFDLPDGVYGVDTEG PTRGLPKLLFTCPHGAEATGPCFTPDGTTLFLSVQHPSEDAETLDKAQSLWPDFKDGQPPRPSVVAIRRKDGQPVGA
Sequences:
>Translated_637_residues MANSPSSSSPVIREIIAERVSRRSLLKGSLASGAVIAGGSFVGSLFAGETHAAAALSTLGFSELKRVYDKTHAAAEGYET TIVARWGDPLVAGLLDFDGNKVAADEQDKRFGYNCDYIAFLPLPKGSVNSDHGLLCVNNEYISPNVMFPGMTEDGAGKAM SKEQVDLGLAAMGHSIVEIMLKDGKWQTVEDSPLNRRVTANTEMAVSGPVAGHALMKTSADATGTKVLGTSYNCSGGFTP WGTVLTCEEGVSDLFGGDPKKAPTADILDRYGFDGSDIYGRGRFHDRFNIDKEPNEPNRFDWVVEIDPYDPRSRPVKRTA LGRMSHEASTVVLNKDGRIVVYMGDDDYFEYMYRYVSNKAYDKTNPASSNGLLDDGVLSVARYDADGSMTWLPLVHGQGK LTAENGFADQADVLLKTRLAADALGATPMDRPEDIETNPVTGRVYAVMTKNKKRDESKVNPANTRPENLWGHIVELIPPG GRGIEADHTADKYAWDLFVLCGNPKDAKVGATFHPDTSDNGWFVCPDNITFDPAGRLWVATDGANDFDLPDGVYGVDTEG PTRGLPKLLFTCPHGAEATGPCFTPDGTTLFLSVQHPSEDAETLDKAQSLWPDFKDGQPPRPSVVAIRRKDGQPVGA >Mature_636_residues ANSPSSSSPVIREIIAERVSRRSLLKGSLASGAVIAGGSFVGSLFAGETHAAAALSTLGFSELKRVYDKTHAAAEGYETT IVARWGDPLVAGLLDFDGNKVAADEQDKRFGYNCDYIAFLPLPKGSVNSDHGLLCVNNEYISPNVMFPGMTEDGAGKAMS KEQVDLGLAAMGHSIVEIMLKDGKWQTVEDSPLNRRVTANTEMAVSGPVAGHALMKTSADATGTKVLGTSYNCSGGFTPW GTVLTCEEGVSDLFGGDPKKAPTADILDRYGFDGSDIYGRGRFHDRFNIDKEPNEPNRFDWVVEIDPYDPRSRPVKRTAL GRMSHEASTVVLNKDGRIVVYMGDDDYFEYMYRYVSNKAYDKTNPASSNGLLDDGVLSVARYDADGSMTWLPLVHGQGKL TAENGFADQADVLLKTRLAADALGATPMDRPEDIETNPVTGRVYAVMTKNKKRDESKVNPANTRPENLWGHIVELIPPGG RGIEADHTADKYAWDLFVLCGNPKDAKVGATFHPDTSDNGWFVCPDNITFDPAGRLWVATDGANDFDLPDGVYGVDTEGP TRGLPKLLFTCPHGAEATGPCFTPDGTTLFLSVQHPSEDAETLDKAQSLWPDFKDGQPPRPSVVAIRRKDGQPVGA
Specific function: Unknown
COG id: COG3211
COG function: function code R; Predicted phosphatase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 68788; Mature: 68657
Theoretical pI: Translated: 4.78; Mature: 4.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANSPSSSSPVIREIIAERVSRRSLLKGSLASGAVIAGGSFVGSLFAGETHAAAALSTLG CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHCCCHHHHHHHHHCC FSELKRVYDKTHAAAEGYETTIVARWGDPLVAGLLDFDGNKVAADEQDKRFGYNCDYIAF HHHHHHHHHHHHHHCCCCEEEEEEECCCCEEEHEEECCCCEEECCCCCCCCCCCCCEEEE LPLPKGSVNSDHGLLCVNNEYISPNVMFPGMTEDGAGKAMSKEQVDLGLAAMGHSIVEIM EECCCCCCCCCCCEEEECCCCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHEEEHE LKDGKWQTVEDSPLNRRVTANTEMAVSGPVAGHALMKTSADATGTKVLGTSYNCSGGFTP ECCCCEEEECCCCCCCEEECCCEEEECCCCCCHHHHCCCCCCCCCEEEECCCCCCCCCCC WGTVLTCEEGVSDLFGGDPKKAPTADILDRYGFDGSDIYGRGRFHDRFNIDKEPNEPNRF CCCEEECHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCCCCCE DWVVEIDPYDPRSRPVKRTALGRMSHEASTVVLNKDGRIVVYMGDDDYFEYMYRYVSNKA EEEEEECCCCCCCCCHHHHHHHHCCCCCEEEEECCCCEEEEEECCCHHHHHHHHHHCCCC YDKTNPASSNGLLDDGVLSVARYDADGSMTWLPLVHGQGKLTAENGFADQADVLLKTRLA CCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEEEECCCEEEECCCCCCHHHHHHHHHHH ADALGATPMDRPEDIETNPVTGRVYAVMTKNKKRDESKVNPANTRPENLWGHIVELIPPG HHHHCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHEEECCC GRGIEADHTADKYAWDLFVLCGNPKDAKVGATFHPDTSDNGWFVCPDNITFDPAGRLWVA CCCCCCCCCCCCEEEEEEEEECCCCCCEECEEECCCCCCCCEEEECCCCEECCCCCEEEE TDGANDFDLPDGVYGVDTEGPTRGLPKLLFTCPHGAEATGPCFTPDGTTLFLSVQHPSED ECCCCCCCCCCCEEECCCCCCCCCCCCEEEECCCCCCCCCCEECCCCCEEEEEEECCCCH AETLDKAQSLWPDFKDGQPPRPSVVAIRRKDGQPVGA HHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCC >Mature Secondary Structure ANSPSSSSPVIREIIAERVSRRSLLKGSLASGAVIAGGSFVGSLFAGETHAAAALSTLG CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHCCCHHHHHHHHHCC FSELKRVYDKTHAAAEGYETTIVARWGDPLVAGLLDFDGNKVAADEQDKRFGYNCDYIAF HHHHHHHHHHHHHHCCCCEEEEEEECCCCEEEHEEECCCCEEECCCCCCCCCCCCCEEEE LPLPKGSVNSDHGLLCVNNEYISPNVMFPGMTEDGAGKAMSKEQVDLGLAAMGHSIVEIM EECCCCCCCCCCCEEEECCCCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHEEEHE LKDGKWQTVEDSPLNRRVTANTEMAVSGPVAGHALMKTSADATGTKVLGTSYNCSGGFTP ECCCCEEEECCCCCCCEEECCCEEEECCCCCCHHHHCCCCCCCCCEEEECCCCCCCCCCC WGTVLTCEEGVSDLFGGDPKKAPTADILDRYGFDGSDIYGRGRFHDRFNIDKEPNEPNRF CCCEEECHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCCCCCE DWVVEIDPYDPRSRPVKRTALGRMSHEASTVVLNKDGRIVVYMGDDDYFEYMYRYVSNKA EEEEEECCCCCCCCCHHHHHHHHCCCCCEEEEECCCCEEEEEECCCHHHHHHHHHHCCCC YDKTNPASSNGLLDDGVLSVARYDADGSMTWLPLVHGQGKLTAENGFADQADVLLKTRLA CCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEEEECCCEEEECCCCCCHHHHHHHHHHH ADALGATPMDRPEDIETNPVTGRVYAVMTKNKKRDESKVNPANTRPENLWGHIVELIPPG HHHHCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHEEECCC GRGIEADHTADKYAWDLFVLCGNPKDAKVGATFHPDTSDNGWFVCPDNITFDPAGRLWVA CCCCCCCCCCCCEEEEEEEEECCCCCCEECEEECCCCCCCCEEEECCCCEECCCCCEEEE TDGANDFDLPDGVYGVDTEGPTRGLPKLLFTCPHGAEATGPCFTPDGTTLFLSVQHPSED ECCCCCCCCCCCEEECCCCCCCCCCCCEEEECCCCCCCCCCEECCCCCEEEEEEECCCCH AETLDKAQSLWPDFKDGQPPRPSVVAIRRKDGQPVGA HHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA