Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
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Accession | NC_002678 |
Length | 7,036,071 |
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The map label for this gene is 13470852
Identifier: 13470852
GI number: 13470852
Start: 517585
End: 518799
Strand: Direct
Name: 13470852
Synonym: mlr0661
Alternate gene names: NA
Gene position: 517585-518799 (Clockwise)
Preceding gene: 13470851
Following gene: 13470853
Centisome position: 7.36
GC content: 62.06
Gene sequence:
>1215_bases ATGGATCAGGGCGACGATGGCGACGGGCAAACTGCAAATGCGGACTATTCGATCCGTATCGCCGCAGGCATCGGCGCGTT CACCTGCGATGAGTGGAACGGCTTTGCCGGTACCACGCGCAGCGATGCGGAAAATGGCTATAACCCGCTCGTTTCATTTG CCTTTTTAAGTGCGCTTGAGGATTCCGGCTGCGCCGTGCGGCGCACCGGCTGGCAGGGACATCATGTGCGGCTGGAGACC GCGCAAGGCAGGCTGCTAGGCGCCGTTCCCTGCTATCTCAAATCGCACAGCCAGGGCGAATATGTGTTCGACCACGGCTG GTCTGACGCCTTCGAACGCGCCGGCGGCCGCTATTATCCGAAACTGCAATGCGCCGTGCCGTTCACGCCGGTCACCGGCC CTCGCCTGCTGGTCAACAGAGGCGAGGATCCGGATGCGGTTAAGGCCGGGCTTGCCGCCGGCCTCAAAATGGTGACCGAC AAGCTCGGCGTGTCCTCGGCGCATGTCACCTTCGCGCAGGAAAGTGACGTCGCGACGCTCGAGGCCGCCGGTTTCCTGCA TCGCACCGACCAGCAGTTCCATTTCTTCAACGAAGGTTTTTCGACCTATGACGACTTCCTCGCCACGCTTGCCTCGCGCA AGCGCAAGGCGATGAAGAAGGAACGGCGCGAAGCGCTTGCCGATGGCATCACCATCGACTGGCTGACCGGCAAGGACCTG ACCGAAAAGGCCTGGGATGATTTCTTCGCCTTCTACATGGACACCGGCAGCCGCAAATGGGGCCGCCCCTACCTGAACCG CCAGTTCTTCTCGCTGATCGGCGAGCGCATGGCCGACGATATCCTGTTGGTGATGGCCAGGCGCAATGGGCGCTACGTGG CCGGCGCCATCAATTTCATCGGCTCGGACGCGCTCTACGGCCGCAACTGGGGCTGTATCGAGGATCACCCCTTCCTACAT TTCGAGGTCTGCTACCACCAGGCCATCGACTTCGCCATCGAGCGCAAGCTGAAGGTGGTCGAGGCGGGCGCGCAAGGAGA GCACAAGCTGGCGCGCGGTTACCGGCCCGTGACGATGCATTCCGCGCACTACATTTCGCATCCCGGCCTGCGCAATGCGG TGGCCGACTATCTCCAGCGCGAGCGGCGCGAAGTAGAGCGGATGGGCGAATATCTCGAAGAACACACCCCGTTTCGCAAG GATCTCGAGGAGTAG
Upstream 100 bases:
>100_bases ATGACGTTCGAAGGGTTCGAACCCGAACTGGTCAAAGTCGCTTGAGCGGAGTGTCTGAAACGTGACTTGTAGCGGCCTGG ATGGAGCTTAAATAAGCCTC
Downstream 100 bases:
>100_bases CAGGCCTTCTGGCATGGCCGATCTCGCCTGATCGCCCGTCCCATCGTCTTGCCGCTCCGGAAGAGCTTCGCTACACGGGA CGCGAGGCAAAAATCCGGAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 404; Mature: 404
Protein sequence:
>404_residues MDQGDDGDGQTANADYSIRIAAGIGAFTCDEWNGFAGTTRSDAENGYNPLVSFAFLSALEDSGCAVRRTGWQGHHVRLET AQGRLLGAVPCYLKSHSQGEYVFDHGWSDAFERAGGRYYPKLQCAVPFTPVTGPRLLVNRGEDPDAVKAGLAAGLKMVTD KLGVSSAHVTFAQESDVATLEAAGFLHRTDQQFHFFNEGFSTYDDFLATLASRKRKAMKKERREALADGITIDWLTGKDL TEKAWDDFFAFYMDTGSRKWGRPYLNRQFFSLIGERMADDILLVMARRNGRYVAGAINFIGSDALYGRNWGCIEDHPFLH FEVCYHQAIDFAIERKLKVVEAGAQGEHKLARGYRPVTMHSAHYISHPGLRNAVADYLQRERREVERMGEYLEEHTPFRK DLEE
Sequences:
>Translated_404_residues MDQGDDGDGQTANADYSIRIAAGIGAFTCDEWNGFAGTTRSDAENGYNPLVSFAFLSALEDSGCAVRRTGWQGHHVRLET AQGRLLGAVPCYLKSHSQGEYVFDHGWSDAFERAGGRYYPKLQCAVPFTPVTGPRLLVNRGEDPDAVKAGLAAGLKMVTD KLGVSSAHVTFAQESDVATLEAAGFLHRTDQQFHFFNEGFSTYDDFLATLASRKRKAMKKERREALADGITIDWLTGKDL TEKAWDDFFAFYMDTGSRKWGRPYLNRQFFSLIGERMADDILLVMARRNGRYVAGAINFIGSDALYGRNWGCIEDHPFLH FEVCYHQAIDFAIERKLKVVEAGAQGEHKLARGYRPVTMHSAHYISHPGLRNAVADYLQRERREVERMGEYLEEHTPFRK DLEE >Mature_404_residues MDQGDDGDGQTANADYSIRIAAGIGAFTCDEWNGFAGTTRSDAENGYNPLVSFAFLSALEDSGCAVRRTGWQGHHVRLET AQGRLLGAVPCYLKSHSQGEYVFDHGWSDAFERAGGRYYPKLQCAVPFTPVTGPRLLVNRGEDPDAVKAGLAAGLKMVTD KLGVSSAHVTFAQESDVATLEAAGFLHRTDQQFHFFNEGFSTYDDFLATLASRKRKAMKKERREALADGITIDWLTGKDL TEKAWDDFFAFYMDTGSRKWGRPYLNRQFFSLIGERMADDILLVMARRNGRYVAGAINFIGSDALYGRNWGCIEDHPFLH FEVCYHQAIDFAIERKLKVVEAGAQGEHKLARGYRPVTMHSAHYISHPGLRNAVADYLQRERREVERMGEYLEEHTPFRK DLEE
Specific function: Unknown
COG id: COG3146
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45380; Mature: 45380
Theoretical pI: Translated: 6.35; Mature: 6.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDQGDDGDGQTANADYSIRIAAGIGAFTCDEWNGFAGTTRSDAENGYNPLVSFAFLSALE CCCCCCCCCCCCCCCEEEEEEECCCEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHC DSGCAVRRTGWQGHHVRLETAQGRLLGAVPCYLKSHSQGEYVFDHGWSDAFERAGGRYYP CCCCEEEECCCCCCEEEEEECCCCEEEECHHHHCCCCCCCEEEECCCHHHHHHCCCCCCC KLQCAVPFTPVTGPRLLVNRGEDPDAVKAGLAAGLKMVTDKLGVSSAHVTFAQESDVATL EEEEECCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHH EAAGFLHRTDQQFHFFNEGFSTYDDFLATLASRKRKAMKKERREALADGITIDWLTGKDL HHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCH TEKAWDDFFAFYMDTGSRKWGRPYLNRQFFSLIGERMADDILLVMARRNGRYVAGAINFI HHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHEEEEEECCCCCEEEEEHHHH GSDALYGRNWGCIEDHPFLHFEVCYHQAIDFAIERKLKVVEAGAQGEHKLARGYRPVTMH CCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHCCCCEEEC SAHYISHPGLRNAVADYLQRERREVERMGEYLEEHTPFRKDLEE CCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCC >Mature Secondary Structure MDQGDDGDGQTANADYSIRIAAGIGAFTCDEWNGFAGTTRSDAENGYNPLVSFAFLSALE CCCCCCCCCCCCCCCEEEEEEECCCEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHC DSGCAVRRTGWQGHHVRLETAQGRLLGAVPCYLKSHSQGEYVFDHGWSDAFERAGGRYYP CCCCEEEECCCCCCEEEEEECCCCEEEECHHHHCCCCCCCEEEECCCHHHHHHCCCCCCC KLQCAVPFTPVTGPRLLVNRGEDPDAVKAGLAAGLKMVTDKLGVSSAHVTFAQESDVATL EEEEECCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHH EAAGFLHRTDQQFHFFNEGFSTYDDFLATLASRKRKAMKKERREALADGITIDWLTGKDL HHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCH TEKAWDDFFAFYMDTGSRKWGRPYLNRQFFSLIGERMADDILLVMARRNGRYVAGAINFI HHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHEEEEEECCCCCEEEEEHHHH GSDALYGRNWGCIEDHPFLHFEVCYHQAIDFAIERKLKVVEAGAQGEHKLARGYRPVTMH CCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHCCCCEEEC SAHYISHPGLRNAVADYLQRERREVERMGEYLEEHTPFRKDLEE CCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA