Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
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Accession | NC_002678 |
Length | 7,036,071 |
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The map label for this gene is 13470850
Identifier: 13470850
GI number: 13470850
Start: 516323
End: 516787
Strand: Direct
Name: 13470850
Synonym: mlr0658
Alternate gene names: NA
Gene position: 516323-516787 (Clockwise)
Preceding gene: 13470844
Following gene: 13470851
Centisome position: 7.34
GC content: 61.94
Gene sequence:
>465_bases ATGAGTGAAACAATCGAAAAGCGGCTAAGCGATCTCGGCGTGACGCTTCCTGTCGCGGCCGCACCTGCCGCCAACTACGT TCCCTACTGCAGGTCGGGCAATCTGCTGTTCACCGCCGGGCAATTGCCGCTCAAGGACGGCAAGCTGCAGGCGAGCGGTC TGCTCGGCCGCGACGTCGACACGGCAAGCGGCAAAGAGGCGGCGAAATACTGCGCGATCAATATTCTGGCGCAAGCCAGG GCTGCGCTCGGCGACCTGGAGAAAATCAGCCGGCTGGTCAAGATCACTGTCTTCGTTGCCTCCGCCCCCGACTTTGTCGA GCAGCATCTGGTTGCCAATGGTGCCTCCGATTTCCTGGTCGCCGCCCTTGGCGAGCGCGGCAAACACGCTCGCTCCGCCG TCGGCACCACCTCTCTGCCGCTTAATGCCGCGGTGGAAATCGAAGCCATCTTCGAAGTCGAATGA
Upstream 100 bases:
>100_bases GGAAAGATGGTCCAGCTTAAAAAAAGTCGTGGCGGAAGCGAGGCAAAAATAGCAATTTCGGCCCCGCCAGCGCGGCGCCT TCCAGCAATAGGGAAAAGCA
Downstream 100 bases:
>100_bases ACGAAGGCCTGACATGACCGACCTATCCTGGCTGACTGCCCGGCCCGTTGCCCATCGCGGCTTCCACGACATGAACAAGA CGCGCTGGGAAAACACGCTT
Product: hypothetical protein
Products: NA
Alternate protein names: Translation Initiation Inhibitor; Endoribonuclease L-PSP Family Protein; Endoribonuclease; Endoribonuclease L-Psp; Translation Initiation Inhibitor YjgF Family; Transcriptional Regulator; Endoribonuclease L-PSP Superfamily; Translation Initiation Inhibitor Protein; YjgF Family Translation Initiation Inhibitor; Transcription Regulator; Endoribonuclease Family Protein; Endoribonuclease L-PSP Family; L-PSP Family Endoribonuclease; 2-Aminomuconate Deaminase; YjgF-Family Protein; Endoribonuclease-L-PSP Family Protein; Peptidase C; Creatininase; Translation Initiation Inhibitor YjgF
Number of amino acids: Translated: 154; Mature: 153
Protein sequence:
>154_residues MSETIEKRLSDLGVTLPVAAAPAANYVPYCRSGNLLFTAGQLPLKDGKLQASGLLGRDVDTASGKEAAKYCAINILAQAR AALGDLEKISRLVKITVFVASAPDFVEQHLVANGASDFLVAALGERGKHARSAVGTTSLPLNAAVEIEAIFEVE
Sequences:
>Translated_154_residues MSETIEKRLSDLGVTLPVAAAPAANYVPYCRSGNLLFTAGQLPLKDGKLQASGLLGRDVDTASGKEAAKYCAINILAQAR AALGDLEKISRLVKITVFVASAPDFVEQHLVANGASDFLVAALGERGKHARSAVGTTSLPLNAAVEIEAIFEVE >Mature_153_residues SETIEKRLSDLGVTLPVAAAPAANYVPYCRSGNLLFTAGQLPLKDGKLQASGLLGRDVDTASGKEAAKYCAINILAQARA ALGDLEKISRLVKITVFVASAPDFVEQHLVANGASDFLVAALGERGKHARSAVGTTSLPLNAAVEIEAIFEVE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16079; Mature: 15947
Theoretical pI: Translated: 5.76; Mature: 5.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSETIEKRLSDLGVTLPVAAAPAANYVPYCRSGNLLFTAGQLPLKDGKLQASGLLGRDVD CCHHHHHHHHHCCCEEEECCCCCCCCCCEECCCCEEEEECCCCCCCCCEEECCCCCCCCC TASGKEAAKYCAINILAQARAALGDLEKISRLVKITVFVASAPDFVEQHLVANGASDFLV CCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHEEEEECCHHHHHHHHHHCCCCHHHH AALGERGKHARSAVGTTSLPLNAAVEIEAIFEVE HHHCCCCCHHHHHCCCCCCCCCCEEEEEEEEECC >Mature Secondary Structure SETIEKRLSDLGVTLPVAAAPAANYVPYCRSGNLLFTAGQLPLKDGKLQASGLLGRDVD CHHHHHHHHHCCCEEEECCCCCCCCCCEECCCCEEEEECCCCCCCCCEEECCCCCCCCC TASGKEAAKYCAINILAQARAALGDLEKISRLVKITVFVASAPDFVEQHLVANGASDFLV CCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHEEEEECCHHHHHHHHHHCCCCHHHH AALGERGKHARSAVGTTSLPLNAAVEIEAIFEVE HHHCCCCCHHHHHCCCCCCCCCCEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA