Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
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Accession | NC_002678 |
Length | 7,036,071 |
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The map label for this gene is 13470762
Identifier: 13470762
GI number: 13470762
Start: 407397
End: 408101
Strand: Direct
Name: 13470762
Synonym: mlr0554
Alternate gene names: NA
Gene position: 407397-408101 (Clockwise)
Preceding gene: 13470761
Following gene: 13470763
Centisome position: 5.79
GC content: 61.84
Gene sequence:
>705_bases ATGTCCCTGCCCGCCCCAGACTGGACGGCGCACGACATCATCGCACATCTGCGCTCAATCGGCACCGACGAAAACCGCGC CGGCATGGCGCGGTTCGGCATCAACATCGCGACCGCGCTTGGTGTCGGCAATACGGATTTGCGGCCCTTGGCGCGCAAGC TGAAGCGCAATCACGAACGATCCCTGGCGCTGTGGGCCAGCGGCATTCGCGAAGCACGGCTCGTTGCGGCTTTCACTGGC GAATCGAAGAGGATCACCATCGAGGAATGCCGCCGCTGGGCCGGCGATTTCAATTCCTGGGAAGTCGTCGATACCGTCTC CGACCTGTTCGTCGACACGCCGTTCTGGCGTGCGCTGATTGAGGAGTTTGCGGGCGACGAGCGCGAATTCGTCCGCCGCA CGGCCTTTGCCATGCTGGCATGGGCGGCCGTGCATTTGAAAAAGGAGCCGGACGCGACGTTCCTGTCCTATCTACCATTG ATCGAAGTCCACGCCGGCGATGAGCGCAACTTCGTCAGGAAAGCAGTCAACTGGGCGCTGCGGCAGATCGGCAAGCGATC GATGAGCCTGCACACCCCTGCCCTGGCGCTGGCGCAGAAGCTTGCCGACTCCCCAGACAAAACCGCGCGCTGGATCGGCA AGGATGCTGTGAAGGAATTGTCGGATGCCAAAACGCTCGAACGCCTCGCCAGCAGAAAAATTTGA
Upstream 100 bases:
>100_bases GACCGCGCTTGTCGACCAGTTCTACAAGGATGTGCAGGCCATGGGCGGCAAGCGCTGGGACACGTCCTCGCTGCTCGCGC GCCTGGAGAAGTAGGGGGCC
Downstream 100 bases:
>100_bases CCTCGCCAACATCCGCTTCATCGAGGTGACGCCGGCAACACGCGGCAGCTTTGAGACCCTGTTCGAGCAGCCGGGTGCGC CAAAATACTGCTGGTGCATG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 234; Mature: 233
Protein sequence:
>234_residues MSLPAPDWTAHDIIAHLRSIGTDENRAGMARFGINIATALGVGNTDLRPLARKLKRNHERSLALWASGIREARLVAAFTG ESKRITIEECRRWAGDFNSWEVVDTVSDLFVDTPFWRALIEEFAGDEREFVRRTAFAMLAWAAVHLKKEPDATFLSYLPL IEVHAGDERNFVRKAVNWALRQIGKRSMSLHTPALALAQKLADSPDKTARWIGKDAVKELSDAKTLERLASRKI
Sequences:
>Translated_234_residues MSLPAPDWTAHDIIAHLRSIGTDENRAGMARFGINIATALGVGNTDLRPLARKLKRNHERSLALWASGIREARLVAAFTG ESKRITIEECRRWAGDFNSWEVVDTVSDLFVDTPFWRALIEEFAGDEREFVRRTAFAMLAWAAVHLKKEPDATFLSYLPL IEVHAGDERNFVRKAVNWALRQIGKRSMSLHTPALALAQKLADSPDKTARWIGKDAVKELSDAKTLERLASRKI >Mature_233_residues SLPAPDWTAHDIIAHLRSIGTDENRAGMARFGINIATALGVGNTDLRPLARKLKRNHERSLALWASGIREARLVAAFTGE SKRITIEECRRWAGDFNSWEVVDTVSDLFVDTPFWRALIEEFAGDEREFVRRTAFAMLAWAAVHLKKEPDATFLSYLPLI EVHAGDERNFVRKAVNWALRQIGKRSMSLHTPALALAQKLADSPDKTARWIGKDAVKELSDAKTLERLASRKI
Specific function: Unknown
COG id: COG4912
COG function: function code L; Predicted DNA alkylation repair enzyme
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26329; Mature: 26198
Theoretical pI: Translated: 10.16; Mature: 10.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLPAPDWTAHDIIAHLRSIGTDENRAGMARFGINIATALGVGNTDLRPLARKLKRNHER CCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH SLALWASGIREARLVAAFTGESKRITIEECRRWAGDFNSWEVVDTVSDLFVDTPFWRALI HHHHHHHHHHHHHHHHEECCCCCEEEHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHH EEFAGDEREFVRRTAFAMLAWAAVHLKKEPDATFLSYLPLIEVHAGDERNFVRKAVNWAL HHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHEEECCCHHHHHHHHHHHHH RQIGKRSMSLHTPALALAQKLADSPDKTARWIGKDAVKELSDAKTLERLASRKI HHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SLPAPDWTAHDIIAHLRSIGTDENRAGMARFGINIATALGVGNTDLRPLARKLKRNHER CCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH SLALWASGIREARLVAAFTGESKRITIEECRRWAGDFNSWEVVDTVSDLFVDTPFWRALI HHHHHHHHHHHHHHHHEECCCCCEEEHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHH EEFAGDEREFVRRTAFAMLAWAAVHLKKEPDATFLSYLPLIEVHAGDERNFVRKAVNWAL HHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHEEECCCHHHHHHHHHHHHH RQIGKRSMSLHTPALALAQKLADSPDKTARWIGKDAVKELSDAKTLERLASRKI HHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA