Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
---|---|
Accession | NC_002678 |
Length | 7,036,071 |
Click here to switch to the map view.
The map label for this gene is ywbO [H]
Identifier: 13470733
GI number: 13470733
Start: 381528
End: 382208
Strand: Direct
Name: ywbO [H]
Synonym: mlr0515
Alternate gene names: 13470733
Gene position: 381528-382208 (Clockwise)
Preceding gene: 13470732
Following gene: 13470735
Centisome position: 5.42
GC content: 64.9
Gene sequence:
>681_bases ATGAGCGAAGCGAACGCCGTAACCGTCGATGTGGTGTCGGATGTCGTCTGCCCCTGGTGCTTCATCGGCCAGAAGCGGCT GGACAAGGCGGTTGCCGCGGCCGGCGATGTCGATGTGCATATACGCTGGCGACCGTTCCAGCTCGATCCGACCATTCCGC CGCAAGGCAAGGACCGCCGGGAGTATATGCTTGCCAAGTTCGGCAGCGACGAGCGCATTCGCGAGATTCATGCCCGCATC GAGCCGCTTGGCGAGGCAGAGGGCATTTCCTTTGCCTTCGATGCCATCAAGGTGGCGCCGAACACGCTCGATGCGCACCG CCTGATCCGCTGGGCGGGTGCTGCCGGTGAAGCCGTGCAGAACAGGCTGGTCCGCCGCCTCTTCCAGTTGAATTTCGAGG AAGGCGTCAACATCGGCGACCATGCCGTGTTGGTCGAAGCCGCCCGCGAGGCCGGCATGGATGCCTCCGTGGTCGCCACG CTCTTGCCGACCGACGCCGATGTCGAAGCGGTGCGCACGGAGATCGCCACGGCGTCGCGCATGGGCATATCGGGCGTGCC GTGCTTCCTGCTCGAAGGCAAATATGCCGTGATGGGTGCTCAGGACGTCGACACGCTGGCGGATGCCATCCGCCAGGTGG CGGCGGCGAAGGCACGGGGCGAATTGGACAAGGTCGGCTGA
Upstream 100 bases:
>100_bases GCTTACTGGAATTATCTGGAACATCCGAAGAAGACGCCCATATTCGGTTATCAGCTGCCGACATGGTGGCGCAAACCGAA CTGAAAGTCCGGAGATCGAG
Downstream 100 bases:
>100_bases GGCCGGGCCATTCCTTCGCCTGCGAGCGCAGGCCTACTTCACCGTCACCTTGGCCTTGCTGATGAAAAATCCATGGCCGT TGCTTGCCGCGCAGATCAGG
Product: thiol oxidoreductase FrnE
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 226; Mature: 225
Protein sequence:
>226_residues MSEANAVTVDVVSDVVCPWCFIGQKRLDKAVAAAGDVDVHIRWRPFQLDPTIPPQGKDRREYMLAKFGSDERIREIHARI EPLGEAEGISFAFDAIKVAPNTLDAHRLIRWAGAAGEAVQNRLVRRLFQLNFEEGVNIGDHAVLVEAAREAGMDASVVAT LLPTDADVEAVRTEIATASRMGISGVPCFLLEGKYAVMGAQDVDTLADAIRQVAAAKARGELDKVG
Sequences:
>Translated_226_residues MSEANAVTVDVVSDVVCPWCFIGQKRLDKAVAAAGDVDVHIRWRPFQLDPTIPPQGKDRREYMLAKFGSDERIREIHARI EPLGEAEGISFAFDAIKVAPNTLDAHRLIRWAGAAGEAVQNRLVRRLFQLNFEEGVNIGDHAVLVEAAREAGMDASVVAT LLPTDADVEAVRTEIATASRMGISGVPCFLLEGKYAVMGAQDVDTLADAIRQVAAAKARGELDKVG >Mature_225_residues SEANAVTVDVVSDVVCPWCFIGQKRLDKAVAAAGDVDVHIRWRPFQLDPTIPPQGKDRREYMLAKFGSDERIREIHARIE PLGEAEGISFAFDAIKVAPNTLDAHRLIRWAGAAGEAVQNRLVRRLFQLNFEEGVNIGDHAVLVEAAREAGMDASVVATL LPTDADVEAVRTEIATASRMGISGVPCFLLEGKYAVMGAQDVDTLADAIRQVAAAKARGELDKVG
Specific function: Unknown
COG id: COG2761
COG function: function code Q; Predicted dithiol-disulfide isomerase involved in polyketide biosynthesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001853 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF01323 DSBA [H]
EC number: NA
Molecular weight: Translated: 24447; Mature: 24316
Theoretical pI: Translated: 4.87; Mature: 4.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEANAVTVDVVSDVVCPWCFIGQKRLDKAVAAAGDVDVHIRWRPFQLDPTIPPQGKDRR CCCCCEEEHHHHHHHHHHHHHHCHHHHHHHHHHCCCEEEEEEEEEEEECCCCCCCCCCHH EYMLAKFGSDERIREIHARIEPLGEAEGISFAFDAIKVAPNTLDAHRLIRWAGAAGEAVQ HHHHHHCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHH NRLVRRLFQLNFEEGVNIGDHAVLVEAAREAGMDASVVATLLPTDADVEAVRTEIATASR HHHHHHHHHCCHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHCCCCCCHHHHHHHHHHHHH MGISGVPCFLLEGKYAVMGAQDVDTLADAIRQVAAAKARGELDKVG CCCCCCCEEEECCCEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure SEANAVTVDVVSDVVCPWCFIGQKRLDKAVAAAGDVDVHIRWRPFQLDPTIPPQGKDRR CCCCEEEHHHHHHHHHHHHHHCHHHHHHHHHHCCCEEEEEEEEEEEECCCCCCCCCCHH EYMLAKFGSDERIREIHARIEPLGEAEGISFAFDAIKVAPNTLDAHRLIRWAGAAGEAVQ HHHHHHCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHH NRLVRRLFQLNFEEGVNIGDHAVLVEAAREAGMDASVVATLLPTDADVEAVRTEIATASR HHHHHHHHHCCHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHCCCCCCHHHHHHHHHHHHH MGISGVPCFLLEGKYAVMGAQDVDTLADAIRQVAAAKARGELDKVG CCCCCCCEEEECCCEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7934828; 9384377 [H]