Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
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Accession | NC_002678 |
Length | 7,036,071 |
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The map label for this gene is 13470690
Identifier: 13470690
GI number: 13470690
Start: 340927
End: 341196
Strand: Direct
Name: 13470690
Synonym: msr0466
Alternate gene names: NA
Gene position: 340927-341196 (Clockwise)
Preceding gene: 13470672
Following gene: 13470695
Centisome position: 4.85
GC content: 57.04
Gene sequence:
>270_bases ATGACTGACGACGAGATGAAAGCAGTCTTTGCCCTTAGACACGTGCGAGCGCGCATTATGGGCGTCGTTGATGCAAGGGA GCACAAGGGCGCGCAGATCGAAGACCGCTACCTCGGTCAGGCAATAGCTTTTATCGCGCAAGCACCGATGGACGGCTTCG ATGTCCGCGCCGCCGTCGTCTTATATGGCGAGCGAGGTAACGAGAGTCTTCGGGCCCAAGATTGCGCGCAACTGTGGGCC AAATACGGGAAGACCATAGCCGAGAATTGA
Upstream 100 bases:
>100_bases TTTTGAGAGGATCGACATCGGGCGGCGCCCTTCTGTTTTGTTGGACTTGCCGCCGGTCGGCGTTGATGATCTGGTGGCGC CAGCATAAGGACATCAGTGT
Downstream 100 bases:
>100_bases GCGTCACATCGCTACCGACAAAAAACCCGCCTCGCGGGCGGGTTCTTGGCGCATTTCTGCGAATGGCAATCTATTACGAG GTTTCGCGTTGAAAGTCAAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 89; Mature: 88
Protein sequence:
>89_residues MTDDEMKAVFALRHVRARIMGVVDAREHKGAQIEDRYLGQAIAFIAQAPMDGFDVRAAVVLYGERGNESLRAQDCAQLWA KYGKTIAEN
Sequences:
>Translated_89_residues MTDDEMKAVFALRHVRARIMGVVDAREHKGAQIEDRYLGQAIAFIAQAPMDGFDVRAAVVLYGERGNESLRAQDCAQLWA KYGKTIAEN >Mature_88_residues TDDEMKAVFALRHVRARIMGVVDAREHKGAQIEDRYLGQAIAFIAQAPMDGFDVRAAVVLYGERGNESLRAQDCAQLWAK YGKTIAEN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9926; Mature: 9795
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDDEMKAVFALRHVRARIMGVVDAREHKGAQIEDRYLGQAIAFIAQAPMDGFDVRAAVV CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEE LYGERGNESLRAQDCAQLWAKYGKTIAEN EECCCCCCCCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TDDEMKAVFALRHVRARIMGVVDAREHKGAQIEDRYLGQAIAFIAQAPMDGFDVRAAVV CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEE LYGERGNESLRAQDCAQLWAKYGKTIAEN EECCCCCCCCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA