Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
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Accession | NC_002678 |
Length | 7,036,071 |
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The map label for this gene is lacX [H]
Identifier: 13470644
GI number: 13470644
Start: 296380
End: 297264
Strand: Direct
Name: lacX [H]
Synonym: mlr0411
Alternate gene names: 13470644
Gene position: 296380-297264 (Clockwise)
Preceding gene: 13470643
Following gene: 13470646
Centisome position: 4.21
GC content: 64.86
Gene sequence:
>885_bases GTGGCACAGGACAGCCAAACGCTTCAGGGCGACGGCATCTCGGCTATAATAGTCGGGCAGGGCGCCGAACTGGTTTCGCT GCGGGATGGGCAGGGATCTGAGTTTCTGTGGCAAGCCGGACCGGAGTGGCGGCGCCATTCGCCGGTGCTGTTCCCGATCG TGGGCCGGCTGAAGGGCGATCAGCTGCGCCATCGCGGCCGAACCTATCCGATGACGCAGCACGGCTTCGCCCGAGACAAG CCGTTCACCTGGGAGGAGAGGGGACCCCGCTCCTGCACGCTGGTCCTCACCGACGATGCCGACACGCGTGCGCACTACCC CTTCGCCTTTCGCCTTGCTGTGACCTATACGCTGGGCCGCCAGCAGCTCGGTGTGGCCTTGGAGGTCACCAACACCGGCG ACGAGATGTTGCCGGCCTCGGTCGGTGCACATCCTGCATTCAACTGGCCGTTGCTGCCGGAATTGCCCAAGGAGGCTTAT CGGTTGATCTTTGCCAACGACGAGCCGGCGCCGGTTCGTCGCCTGAAGGATGGCCTCTTGCTCCCGGCAACGTCGCCAAC GCCGATCGAAGGCAAGACGCTTGTGCTGTCTGAGCGGCTGTTCGATGACGACGCCGTCATCTTGGATCGGCCCGCCAGCA CCAGTGTGCGCTACGCCGCCGACCATGGTCCGGCGATTGAAATGTCATGGCAGGGAGCCGAGGAACTGGGCATCTGGTCC AAGCCCGGCGGCGCGCCCTTCCTGTGCATCGAACCCTGGCATGGTATTGCGAGCCCGGCCGATTTCGACGGCGAGTTCAG CGACAAGCCCGGTGTGATGCTGATCGAACCGGGGGCGAAGCGTTCGCTGAGCTACCAGATCGGCCTGGAGCAGGGGCGGC GTTGA
Upstream 100 bases:
>100_bases CCTCCGGCCACAATTCGTTCAGGCAAGACCGTCCATGCCTTGAGTCCCCAAGAGCATTTGCTAGTCTGCCGCCAGCTTCA ACACCGGCCCGCGAGGACAT
Downstream 100 bases:
>100_bases CCGACCGAGCCGCGGAGCCAACGCCTGGGAGTACCCAATGAAACTCGGCTTCATCGGCACAGGTGCGCTGACTTCAGCCA TTGTCACCGGGCTCAAATCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 294; Mature: 293
Protein sequence:
>294_residues MAQDSQTLQGDGISAIIVGQGAELVSLRDGQGSEFLWQAGPEWRRHSPVLFPIVGRLKGDQLRHRGRTYPMTQHGFARDK PFTWEERGPRSCTLVLTDDADTRAHYPFAFRLAVTYTLGRQQLGVALEVTNTGDEMLPASVGAHPAFNWPLLPELPKEAY RLIFANDEPAPVRRLKDGLLLPATSPTPIEGKTLVLSERLFDDDAVILDRPASTSVRYAADHGPAIEMSWQGAEELGIWS KPGGAPFLCIEPWHGIASPADFDGEFSDKPGVMLIEPGAKRSLSYQIGLEQGRR
Sequences:
>Translated_294_residues MAQDSQTLQGDGISAIIVGQGAELVSLRDGQGSEFLWQAGPEWRRHSPVLFPIVGRLKGDQLRHRGRTYPMTQHGFARDK PFTWEERGPRSCTLVLTDDADTRAHYPFAFRLAVTYTLGRQQLGVALEVTNTGDEMLPASVGAHPAFNWPLLPELPKEAY RLIFANDEPAPVRRLKDGLLLPATSPTPIEGKTLVLSERLFDDDAVILDRPASTSVRYAADHGPAIEMSWQGAEELGIWS KPGGAPFLCIEPWHGIASPADFDGEFSDKPGVMLIEPGAKRSLSYQIGLEQGRR >Mature_293_residues AQDSQTLQGDGISAIIVGQGAELVSLRDGQGSEFLWQAGPEWRRHSPVLFPIVGRLKGDQLRHRGRTYPMTQHGFARDKP FTWEERGPRSCTLVLTDDADTRAHYPFAFRLAVTYTLGRQQLGVALEVTNTGDEMLPASVGAHPAFNWPLLPELPKEAYR LIFANDEPAPVRRLKDGLLLPATSPTPIEGKTLVLSERLFDDDAVILDRPASTSVRYAADHGPAIEMSWQGAEELGIWSK PGGAPFLCIEPWHGIASPADFDGEFSDKPGVMLIEPGAKRSLSYQIGLEQGRR
Specific function: Unknown
COG id: COG2017
COG function: function code G; Galactose mutarotase and related enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008183 - InterPro: IPR011013 - InterPro: IPR014718 [H]
Pfam domain/function: PF01263 Aldose_epim [H]
EC number: NA
Molecular weight: Translated: 32364; Mature: 32233
Theoretical pI: Translated: 5.40; Mature: 5.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQDSQTLQGDGISAIIVGQGAELVSLRDGQGSEFLWQAGPEWRRHSPVLFPIVGRLKGD CCCCCCEECCCCEEEEEEECCCEEEEEECCCCCCEEECCCCCHHHCCCEEEEEECCCCCH QLRHRGRTYPMTQHGFARDKPFTWEERGPRSCTLVLTDDADTRAHYPFAFRLAVTYTLGR HHHHCCCCCCCCCCCCCCCCCCCHHCCCCCEEEEEEECCCCCCCCCCEEEEEEEEEEECC QQLGVALEVTNTGDEMLPASVGAHPAFNWPLLPELPKEAYRLIFANDEPAPVRRLKDGLL CCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHCCEE LPATSPTPIEGKTLVLSERLFDDDAVILDRPASTSVRYAADHGPAIEMSWQGAEELGIWS ECCCCCCCCCCCEEEEEEHHCCCCCEEEECCCCCCEEEECCCCCEEEEECCCHHHCCCCC KPGGAPFLCIEPWHGIASPADFDGEFSDKPGVMLIEPGAKRSLSYQIGLEQGRR CCCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEEECCCCCCEEEEEEECCCCCC >Mature Secondary Structure AQDSQTLQGDGISAIIVGQGAELVSLRDGQGSEFLWQAGPEWRRHSPVLFPIVGRLKGD CCCCCEECCCCEEEEEEECCCEEEEEECCCCCCEEECCCCCHHHCCCEEEEEECCCCCH QLRHRGRTYPMTQHGFARDKPFTWEERGPRSCTLVLTDDADTRAHYPFAFRLAVTYTLGR HHHHCCCCCCCCCCCCCCCCCCCHHCCCCCEEEEEEECCCCCCCCCCEEEEEEEEEEECC QQLGVALEVTNTGDEMLPASVGAHPAFNWPLLPELPKEAYRLIFANDEPAPVRRLKDGLL CCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHCCEE LPATSPTPIEGKTLVLSERLFDDDAVILDRPASTSVRYAADHGPAIEMSWQGAEELGIWS ECCCCCCCCCCCEEEEEEHHCCCCCEEEECCCCCCEEEECCCCCEEEEECCCHHHCCCCC KPGGAPFLCIEPWHGIASPADFDGEFSDKPGVMLIEPGAKRSLSYQIGLEQGRR CCCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEEECCCCCCEEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1339371 [H]