Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
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Accession | NC_002678 |
Length | 7,036,071 |
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The map label for this gene is hflX [H]
Identifier: 13470637
GI number: 13470637
Start: 289858
End: 291153
Strand: Direct
Name: hflX [H]
Synonym: mlr0403
Alternate gene names: 13470637
Gene position: 289858-291153 (Clockwise)
Preceding gene: 13470636
Following gene: 13470640
Centisome position: 4.12
GC content: 63.89
Gene sequence:
>1296_bases GTGCCCGTGCTTACCCGCCAGCCGCGCGGTGACGACGACACCAACCGCCCACGGCTGACGCGCTCGGCCGACGCTCGCCA TGACGAGGCGGTCGGCCTCGCGCGCGCCATCAATCTCGACCCAGTCCATACGGCTGTCGTGACCGTCAACGATCCGCGTC CGGCGACCCTGCTTGGCAGCGGCAAGGTCGAAGAGTTCGCCCAAATCGTTAAGGACAACGACGCGGAACTGGTCATCGTC GATCATCCGCTGACCCCGGTGCAGCAACGCAATCTCGAGAAGGAATTGCATGCCAAGGTTCTGGACCGAACCGGGCTGAT CCTCGAAATCTTTGGCGAGCGCGCCCGCACCAAGGAAGGCACGCTGCAGGTCGAACTTGCCCATCTCAACTACCAGAAGG GCCGCCTTGTGCGCAGCTGGACCCACCTTGAACGCCAGCGCGGTGGCGCCGGCTTCCTAGGCGGCCCCGGCGAAACCCAG ATCGAATCCGACCGGCGGCAGTTGCAGGAAAAGATCATCAAGCTGAAGCACGAGCTGGAAACGGTGCGTCGCACCCGCGA CCTGCACCGCGCCAAGCGCAAGAAGGTGCCATTCCCGGTGGTGGCGATCGTCGGCTACACCAATGCCGGCAAGTCGACGC TGTTCAACCGGCTGACCGGAGCGGACGTGCTGGCGCAGGACATGCTGTTCGCCACGCTCGACCCGACGCTGCGCCGCGTG CGCCTGCCGCATGGCACGCCGATCATCCTGTCGGACACGGTCGGTTTCATCTCCGATCTGCCGACGCATTTGATCGCGGC TTTTCGCGCCACGCTGGAAGAGGTGGTCGAAGCCGATCTCGTCATTCATCTGCGCGACATCTCCGATCCCGACACGGCGG CGCAGGCCGAGGATGTCGAGCGCATCCTGGCCGACCTCGGTGTCGACGCCGGTGACACCAAGCGTGTGATCGAAGTCTGG AACAAGGTCGATCTGCTGGACGAAGGCAACAGGAGCCGCCTGCTTGCCGACGCCGTGGATGGCAGCAAAGGTCCGCCGAT CGCCATATCGGCGGTGACCGGCGAGGGCATCGAAGCGCTGAAGGCGGTCATCGAGACACGCATGGCGGGCGAGCTCGAAG ACCTGACGGTGACGATCGAGCCGGCACAGTTCGGCCTTGTCGATTGGCTGTATCGCAACGGCGATATCGTTTCGCGCGCC GACAATGAAGACGGCAGCGCCACCATTTCGCTCAAGGCCACGCAAAGCGCCCGCGAAGAAATCGAAAGCCGATTGCGTCG TAAAAACAACGGGTAA
Upstream 100 bases:
>100_bases CTGATTGGCACGTGAAAAGGACGCGGACGCCACGGTTCGCGGAAAACCAGCGCATCATCCCGGGACGGAAGCCAAGGGGC CGACCCGGGCTGTCGTCATT
Downstream 100 bases:
>100_bases GCCGAAGAATTTCCAGTAAAAAGGCGGTTTTCCCTCCGGAATTGTCGGTCTATCGGCCCTATTTCGCGCTCTTCGCTTCC TGCCAGAGCGCTTCCATCTC
Product: GTP binding protein-like
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 431; Mature: 430
Protein sequence:
>431_residues MPVLTRQPRGDDDTNRPRLTRSADARHDEAVGLARAINLDPVHTAVVTVNDPRPATLLGSGKVEEFAQIVKDNDAELVIV DHPLTPVQQRNLEKELHAKVLDRTGLILEIFGERARTKEGTLQVELAHLNYQKGRLVRSWTHLERQRGGAGFLGGPGETQ IESDRRQLQEKIIKLKHELETVRRTRDLHRAKRKKVPFPVVAIVGYTNAGKSTLFNRLTGADVLAQDMLFATLDPTLRRV RLPHGTPIILSDTVGFISDLPTHLIAAFRATLEEVVEADLVIHLRDISDPDTAAQAEDVERILADLGVDAGDTKRVIEVW NKVDLLDEGNRSRLLADAVDGSKGPPIAISAVTGEGIEALKAVIETRMAGELEDLTVTIEPAQFGLVDWLYRNGDIVSRA DNEDGSATISLKATQSAREEIESRLRRKNNG
Sequences:
>Translated_431_residues MPVLTRQPRGDDDTNRPRLTRSADARHDEAVGLARAINLDPVHTAVVTVNDPRPATLLGSGKVEEFAQIVKDNDAELVIV DHPLTPVQQRNLEKELHAKVLDRTGLILEIFGERARTKEGTLQVELAHLNYQKGRLVRSWTHLERQRGGAGFLGGPGETQ IESDRRQLQEKIIKLKHELETVRRTRDLHRAKRKKVPFPVVAIVGYTNAGKSTLFNRLTGADVLAQDMLFATLDPTLRRV RLPHGTPIILSDTVGFISDLPTHLIAAFRATLEEVVEADLVIHLRDISDPDTAAQAEDVERILADLGVDAGDTKRVIEVW NKVDLLDEGNRSRLLADAVDGSKGPPIAISAVTGEGIEALKAVIETRMAGELEDLTVTIEPAQFGLVDWLYRNGDIVSRA DNEDGSATISLKATQSAREEIESRLRRKNNG >Mature_430_residues PVLTRQPRGDDDTNRPRLTRSADARHDEAVGLARAINLDPVHTAVVTVNDPRPATLLGSGKVEEFAQIVKDNDAELVIVD HPLTPVQQRNLEKELHAKVLDRTGLILEIFGERARTKEGTLQVELAHLNYQKGRLVRSWTHLERQRGGAGFLGGPGETQI ESDRRQLQEKIIKLKHELETVRRTRDLHRAKRKKVPFPVVAIVGYTNAGKSTLFNRLTGADVLAQDMLFATLDPTLRRVR LPHGTPIILSDTVGFISDLPTHLIAAFRATLEEVVEADLVIHLRDISDPDTAAQAEDVERILADLGVDAGDTKRVIEVWN KVDLLDEGNRSRLLADAVDGSKGPPIAISAVTGEGIEALKAVIETRMAGELEDLTVTIEPAQFGLVDWLYRNGDIVSRAD NEDGSATISLKATQSAREEIESRLRRKNNG
Specific function: Unknown
COG id: COG2262
COG function: function code R; GTPases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 G (guanine nucleotide-binding) domain [H]
Homologues:
Organism=Homo sapiens, GI310133118, Length=301, Percent_Identity=34.5514950166113, Blast_Score=145, Evalue=9e-35, Organism=Homo sapiens, GI310133116, Length=289, Percent_Identity=34.9480968858132, Blast_Score=144, Evalue=1e-34, Organism=Homo sapiens, GI310124269, Length=270, Percent_Identity=35.5555555555556, Blast_Score=143, Evalue=3e-34, Organism=Homo sapiens, GI310124267, Length=270, Percent_Identity=35.5555555555556, Blast_Score=143, Evalue=3e-34, Organism=Homo sapiens, GI310124171, Length=270, Percent_Identity=35.5555555555556, Blast_Score=143, Evalue=3e-34, Organism=Homo sapiens, GI310124169, Length=270, Percent_Identity=35.5555555555556, Blast_Score=143, Evalue=3e-34, Organism=Escherichia coli, GI1790615, Length=361, Percent_Identity=45.4293628808864, Blast_Score=285, Evalue=4e-78, Organism=Caenorhabditis elegans, GI17561038, Length=403, Percent_Identity=33.2506203473945, Blast_Score=172, Evalue=4e-43, Organism=Drosophila melanogaster, GI24650079, Length=366, Percent_Identity=36.6120218579235, Blast_Score=153, Evalue=2e-37,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009022 - InterPro: IPR016496 - InterPro: IPR006073 - InterPro: IPR002917 [H]
Pfam domain/function: PF01926 MMR_HSR1 [H]
EC number: NA
Molecular weight: Translated: 47584; Mature: 47452
Theoretical pI: Translated: 6.01; Mature: 6.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 0.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 0.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVLTRQPRGDDDTNRPRLTRSADARHDEAVGLARAINLDPVHTAVVTVNDPRPATLLGS CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCEEEEEEECCCCCCEEECC GKVEEFAQIVKDNDAELVIVDHPLTPVQQRNLEKELHAKVLDRTGLILEIFGERARTKEG CCHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCHHEECCCHHCCCCC TLQVELAHLNYQKGRLVRSWTHLERQRGGAGFLGGPGETQIESDRRQLQEKIIKLKHELE EEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH TVRRTRDLHRAKRKKVPFPVVAIVGYTNAGKSTLFNRLTGADVLAQDMLFATLDPTLRRV HHHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHCCHHHHHHHHHHHHCCHHHHHE RLPHGTPIILSDTVGFISDLPTHLIAAFRATLEEVVEADLVIHLRDISDPDTAAQAEDVE ECCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCCHHHHHHHHH RILADLGVDAGDTKRVIEVWNKVDLLDEGNRSRLLADAVDGSKGPPIAISAVTGEGIEAL HHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCEEEEEECCCCHHHH KAVIETRMAGELEDLTVTIEPAQFGLVDWLYRNGDIVSRADNEDGSATISLKATQSAREE HHHHHHHHCCCCEEEEEEECCHHHHHHHHHHCCCCEEECCCCCCCCEEEEEEECHHHHHH IESRLRRKNNG HHHHHHHCCCC >Mature Secondary Structure PVLTRQPRGDDDTNRPRLTRSADARHDEAVGLARAINLDPVHTAVVTVNDPRPATLLGS CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCEEEEEEECCCCCCEEECC GKVEEFAQIVKDNDAELVIVDHPLTPVQQRNLEKELHAKVLDRTGLILEIFGERARTKEG CCHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCHHEECCCHHCCCCC TLQVELAHLNYQKGRLVRSWTHLERQRGGAGFLGGPGETQIESDRRQLQEKIIKLKHELE EEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH TVRRTRDLHRAKRKKVPFPVVAIVGYTNAGKSTLFNRLTGADVLAQDMLFATLDPTLRRV HHHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHCCHHHHHHHHHHHHCCHHHHHE RLPHGTPIILSDTVGFISDLPTHLIAAFRATLEEVVEADLVIHLRDISDPDTAAQAEDVE ECCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCCHHHHHHHHH RILADLGVDAGDTKRVIEVWNKVDLLDEGNRSRLLADAVDGSKGPPIAISAVTGEGIEAL HHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCEEEEEECCCCHHHH KAVIETRMAGELEDLTVTIEPAQFGLVDWLYRNGDIVSRADNEDGSATISLKATQSAREE HHHHHHHHCCCCEEEEEEECCHHHHHHHHHHCCCCEEECCCCCCCCEEEEEEECHHHHHH IESRLRRKNNG HHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8248183; 7610040; 9278503; 2020545; 3040675 [H]