Definition | Pasteurella multocida subsp. multocida str. Pm70, complete genome. |
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Accession | NC_002663 |
Length | 2,257,487 |
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The map label for this gene is 15603728
Identifier: 15603728
GI number: 15603728
Start: 2104745
End: 2105518
Strand: Direct
Name: 15603728
Synonym: PM1863
Alternate gene names: NA
Gene position: 2104745-2105518 (Clockwise)
Preceding gene: 15603727
Following gene: 15603733
Centisome position: 93.23
GC content: 38.76
Gene sequence:
>774_bases ATGTCTTTAGGTCTGTTTTCGTTTGTGATTGGTTTGCATTCGTTTAGTCGACAGCAATATCGTCAGATGTTGTGGGCGAT TATTGCGACGTTATTCGGGATACTTGGTAGTGTGTTATCGACGGCTCGGGGTGGCTGGATTGGCTTACCGCTGCTGTTAT GTTTTGCGTTGTTTGCTTATCGTCAGTATTTATCGAAAAAAATTCTCTTTTTTGTGAGTTTGTTTTTTGTGTTTCTGTTG GCAGCTGTTGCATTCGCCCCTAAAACAAAGTTGATTTCTCGTGTGACAGAAGCATACACCGAAACACAACAATATTTTGA CGCACAAGCAGAACAATCGACCTCGATTGGCGCGCGTTTTGCGTTATGGAAAAGTGCATTGCTTATGGCAAAAGAAAAAC CACTATTAGGTTGGGGAAATGCGGGAGCGATGGAGAAACGTCAAGTGCAGCAACAAGAAGGGATGATAAGTGAATATGCC GCCAATTTTACTCATGCACACAATCAATATTTGGATAACCTGTCAAAATATGGTCTTGTAGGGTTAGTTGCATTACTGGC GATTTTTAGTGTGCCATTTTGTTATTTTTATCGAAAACGACATGCCATAAAGGGTGAGGAAAAATTAGTGGCAACATTAG GTATGCTTCATATTATTTCAGTGATGTGTTATTCCTTAACTCAAGCCTTTTTAAACCATAATTCCGGTAATATTTTTTAT TTCTTATCGGTTTTTATTTTCTATGGCTGTTTAAAACACAGTGAAAAGGAATAA
Upstream 100 bases:
>100_bases GATAATTGCAGGCGGTGTGGCGATTTATGATCGCTTTATCTTAAATGTTTATGCGGCGTATTCACCGCGTATGTTACAGA TTTAAGCGGGTGATATTGCC
Downstream 100 bases:
>100_bases CACATAATATGATTTCTCTGCTCAATAAAAGAGCACCAGTGCCCACACAACCACCACATTGACCATGGCAATAAAAACGG AAGCGGAGCCGAAATCTTTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 257; Mature: 256
Protein sequence:
>257_residues MSLGLFSFVIGLHSFSRQQYRQMLWAIIATLFGILGSVLSTARGGWIGLPLLLCFALFAYRQYLSKKILFFVSLFFVFLL AAVAFAPKTKLISRVTEAYTETQQYFDAQAEQSTSIGARFALWKSALLMAKEKPLLGWGNAGAMEKRQVQQQEGMISEYA ANFTHAHNQYLDNLSKYGLVGLVALLAIFSVPFCYFYRKRHAIKGEEKLVATLGMLHIISVMCYSLTQAFLNHNSGNIFY FLSVFIFYGCLKHSEKE
Sequences:
>Translated_257_residues MSLGLFSFVIGLHSFSRQQYRQMLWAIIATLFGILGSVLSTARGGWIGLPLLLCFALFAYRQYLSKKILFFVSLFFVFLL AAVAFAPKTKLISRVTEAYTETQQYFDAQAEQSTSIGARFALWKSALLMAKEKPLLGWGNAGAMEKRQVQQQEGMISEYA ANFTHAHNQYLDNLSKYGLVGLVALLAIFSVPFCYFYRKRHAIKGEEKLVATLGMLHIISVMCYSLTQAFLNHNSGNIFY FLSVFIFYGCLKHSEKE >Mature_256_residues SLGLFSFVIGLHSFSRQQYRQMLWAIIATLFGILGSVLSTARGGWIGLPLLLCFALFAYRQYLSKKILFFVSLFFVFLLA AVAFAPKTKLISRVTEAYTETQQYFDAQAEQSTSIGARFALWKSALLMAKEKPLLGWGNAGAMEKRQVQQQEGMISEYAA NFTHAHNQYLDNLSKYGLVGLVALLAIFSVPFCYFYRKRHAIKGEEKLVATLGMLHIISVMCYSLTQAFLNHNSGNIFYF LSVFIFYGCLKHSEKE
Specific function: Unknown
COG id: COG3307
COG function: function code M; Lipid A core - O-antigen ligase and related enzymes
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007016 [H]
Pfam domain/function: PF04932 Wzy_C [H]
EC number: NA
Molecular weight: Translated: 29080; Mature: 28948
Theoretical pI: Translated: 9.76; Mature: 9.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLGLFSFVIGLHSFSRQQYRQMLWAIIATLFGILGSVLSTARGGWIGLPLLLCFALFAY CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH RQYLSKKILFFVSLFFVFLLAAVAFAPKTKLISRVTEAYTETQQYFDAQAEQSTSIGARF HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALWKSALLMAKEKPLLGWGNAGAMEKRQVQQQEGMISEYAANFTHAHNQYLDNLSKYGLV HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GLVALLAIFSVPFCYFYRKRHAIKGEEKLVATLGMLHIISVMCYSLTQAFLNHNSGNIFY HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH FLSVFIFYGCLKHSEKE HHHHHHHHHHHHHCCCC >Mature Secondary Structure SLGLFSFVIGLHSFSRQQYRQMLWAIIATLFGILGSVLSTARGGWIGLPLLLCFALFAY CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH RQYLSKKILFFVSLFFVFLLAAVAFAPKTKLISRVTEAYTETQQYFDAQAEQSTSIGARF HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALWKSALLMAKEKPLLGWGNAGAMEKRQVQQQEGMISEYAANFTHAHNQYLDNLSKYGLV HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GLVALLAIFSVPFCYFYRKRHAIKGEEKLVATLGMLHIISVMCYSLTQAFLNHNSGNIFY HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH FLSVFIFYGCLKHSEKE HHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]