Definition | Pasteurella multocida subsp. multocida str. Pm70, complete genome. |
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Accession | NC_002663 |
Length | 2,257,487 |
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The map label for this gene is 15602068
Identifier: 15602068
GI number: 15602068
Start: 226758
End: 227786
Strand: Reverse
Name: 15602068
Synonym: PM0203
Alternate gene names: NA
Gene position: 227786-226758 (Counterclockwise)
Preceding gene: 15602069
Following gene: 15602066
Centisome position: 10.09
GC content: 40.82
Gene sequence:
>1029_bases ATGAAATTAAAGTCAACCGTCTCTCAACTGTGCTTAGCGTTACCTTTTGTGTTGACAGGACAAGCCTTGGCTGAAGGAAA ACTTACTGTCTATTGCAGTGTACAAAATACTACCTGCGAAAAAATGGTACAAACCTTCAGTAAAAAATACGACATTGAAA CAAAGTTTATTCGTAATAGCACCGGCGCAACACTGGCAAAATTAATGGCAGAGAAAAATAATCCTCAAGCTGATGTATGG TATGGCGGGACGATTGAACACCATTTTCAAGCTGGTGACTTAGCCTTACTGGAACCTTATCGTTCACCTTATCAAGCTGA CATTATGCCACAATTTAGAGCCCTCACTGAAAAGCGCGGTGATTTGACCTCTATCGTTTATATGTTGGTACTGGGATTTG GTATTAATACCGAGAAATTCAAACAACTAGGAATCGATACCTATCCAAAATGTTGGTCAGATTTACTCGATCCGCGTTTA CAAGGCTATGTACAAATGCCTGATCCGCAAATCTCCGGCACCACCTATACCGCTATCGCTACGCTAATTGAATTATGGGG TGAAGAAAAAGCATTTGATTATCTTAAAAAACTCAATGCCAATGTTTCAGAGTATGTGAAAAGTGCGTTGGTTACCACCA ACTTATCACGTGGCGAATCTGCTGTTGCTGTTGGTTTTGTCCACAGTTATGCCACAGAAAAAGAAAATGGCGCACCGGTT GAAAGCATCCAACCTTGTGAAGGCGATGGCTATTCTTTAGGAGGCATGAGTATTGTCAAAAATGCCCGTAATCTTGAGAA TGCCAAACGCTTTGTTGACTGGGCATTAACCAAAGAAGCGCAAGAATTGGTTTGGCGAGAAACCAAAGTCTATCAAATTC CAACTAATATCCATGCAGAAGCCTCGCCACAATCTGTCGATCCGAAACAATTAAAACTGATCAATTATGATTTTGACCGT TTTGGTTCAAGTGCAGAAGGCAAACGTCTCACAGACAAATGGGTCAAAGAAGTGAAAATGGCAAAATAA
Upstream 100 bases:
>100_bases TTTCAAGAGTTTTAACACCACAAACGGGGAACATCAGTTCCCCGTTCGCTATGAATGATCACCGTTTTCTCTGACGAGAA AATAAAAGGAATTAAACATC
Downstream 100 bases:
>100_bases GCTAAAAAAATAGGCAGATACTGTTCTGCCTATTTTTATTCTCGTCGTGCTTAAGCGTTTTCGATACCAAATGCCATGAC TTCATGAATTGCATTTGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 342; Mature: 342
Protein sequence:
>342_residues MKLKSTVSQLCLALPFVLTGQALAEGKLTVYCSVQNTTCEKMVQTFSKKYDIETKFIRNSTGATLAKLMAEKNNPQADVW YGGTIEHHFQAGDLALLEPYRSPYQADIMPQFRALTEKRGDLTSIVYMLVLGFGINTEKFKQLGIDTYPKCWSDLLDPRL QGYVQMPDPQISGTTYTAIATLIELWGEEKAFDYLKKLNANVSEYVKSALVTTNLSRGESAVAVGFVHSYATEKENGAPV ESIQPCEGDGYSLGGMSIVKNARNLENAKRFVDWALTKEAQELVWRETKVYQIPTNIHAEASPQSVDPKQLKLINYDFDR FGSSAEGKRLTDKWVKEVKMAK
Sequences:
>Translated_342_residues MKLKSTVSQLCLALPFVLTGQALAEGKLTVYCSVQNTTCEKMVQTFSKKYDIETKFIRNSTGATLAKLMAEKNNPQADVW YGGTIEHHFQAGDLALLEPYRSPYQADIMPQFRALTEKRGDLTSIVYMLVLGFGINTEKFKQLGIDTYPKCWSDLLDPRL QGYVQMPDPQISGTTYTAIATLIELWGEEKAFDYLKKLNANVSEYVKSALVTTNLSRGESAVAVGFVHSYATEKENGAPV ESIQPCEGDGYSLGGMSIVKNARNLENAKRFVDWALTKEAQELVWRETKVYQIPTNIHAEASPQSVDPKQLKLINYDFDR FGSSAEGKRLTDKWVKEVKMAK >Mature_342_residues MKLKSTVSQLCLALPFVLTGQALAEGKLTVYCSVQNTTCEKMVQTFSKKYDIETKFIRNSTGATLAKLMAEKNNPQADVW YGGTIEHHFQAGDLALLEPYRSPYQADIMPQFRALTEKRGDLTSIVYMLVLGFGINTEKFKQLGIDTYPKCWSDLLDPRL QGYVQMPDPQISGTTYTAIATLIELWGEEKAFDYLKKLNANVSEYVKSALVTTNLSRGESAVAVGFVHSYATEKENGAPV ESIQPCEGDGYSLGGMSIVKNARNLENAKRFVDWALTKEAQELVWRETKVYQIPTNIHAEASPQSVDPKQLKLINYDFDR FGSSAEGKRLTDKWVKEVKMAK
Specific function: Unknown
COG id: COG1840
COG function: function code P; ABC-type Fe3+ transport system, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006059 [H]
Pfam domain/function: PF01547 SBP_bac_1 [H]
EC number: NA
Molecular weight: Translated: 38287; Mature: 38287
Theoretical pI: Translated: 7.40; Mature: 7.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLKSTVSQLCLALPFVLTGQALAEGKLTVYCSVQNTTCEKMVQTFSKKYDIETKFIRNS CCHHHHHHHHHHHHHHHHHCHHHHCCCEEEEEEECCCHHHHHHHHHHHHCCCHHHHHHCC TGATLAKLMAEKNNPQADVWYGGTIEHHFQAGDLALLEPYRSPYQADIMPQFRALTEKRG CHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHCC DLTSIVYMLVLGFGINTEKFKQLGIDTYPKCWSDLLDPRLQGYVQMPDPQISGTTYTAIA HHHHHHHHHHHHCCCCHHHHHHCCCCCCHHHHHHHHCHHHCCEEECCCCCCCCCHHHHHH TLIELWGEEKAFDYLKKLNANVSEYVKSALVTTNLSRGESAVAVGFVHSYATEKENGAPV HHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHCCCCCCCCC ESIQPCEGDGYSLGGMSIVKNARNLENAKRFVDWALTKEAQELVWRETKVYQIPTNIHAE CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEECCCCCCCC ASPQSVDPKQLKLINYDFDRFGSSAEGKRLTDKWVKEVKMAK CCCCCCCHHHEEEEECCHHHCCCCCCCCHHHHHHHHHHHCCC >Mature Secondary Structure MKLKSTVSQLCLALPFVLTGQALAEGKLTVYCSVQNTTCEKMVQTFSKKYDIETKFIRNS CCHHHHHHHHHHHHHHHHHCHHHHCCCEEEEEEECCCHHHHHHHHHHHHCCCHHHHHHCC TGATLAKLMAEKNNPQADVWYGGTIEHHFQAGDLALLEPYRSPYQADIMPQFRALTEKRG CHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHCC DLTSIVYMLVLGFGINTEKFKQLGIDTYPKCWSDLLDPRLQGYVQMPDPQISGTTYTAIA HHHHHHHHHHHHCCCCHHHHHHCCCCCCHHHHHHHHCHHHCCEEECCCCCCCCCHHHHHH TLIELWGEEKAFDYLKKLNANVSEYVKSALVTTNLSRGESAVAVGFVHSYATEKENGAPV HHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHCCCCCCCCC ESIQPCEGDGYSLGGMSIVKNARNLENAKRFVDWALTKEAQELVWRETKVYQIPTNIHAE CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEECCCCCCCC ASPQSVDPKQLKLINYDFDRFGSSAEGKRLTDKWVKEVKMAK CCCCCCCHHHEEEEECCHHHCCCCCCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800; 10675023 [H]