Definition | Pasteurella multocida subsp. multocida str. Pm70, complete genome. |
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Accession | NC_002663 |
Length | 2,257,487 |
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The map label for this gene is yhbJ [C]
Identifier: 15602034
GI number: 15602034
Start: 195225
End: 196091
Strand: Reverse
Name: yhbJ [C]
Synonym: PM0169
Alternate gene names: 15602034
Gene position: 196091-195225 (Counterclockwise)
Preceding gene: 15602035
Following gene: 15602029
Centisome position: 8.69
GC content: 39.1
Gene sequence:
>867_bases ATGGAAATTATCATTATTAGTGGGCACTCTGGTGCGGGCAAGTCCGTTGCTCTCCGTTGTTTAGAGGACATTGGCTATTA TTGTGTTGATAATTTGCCCTTAGACTTACTCCCCCAATTAGCCTCGATTCTTTCGACTAATCAGCAATCCGTTGCGATTA GTCTAGATATTCGTAATTTACCTCACTCCTCAAAAACGTTAGAAAATCTCCTTACCGAAGTACAACAGCAACACCAAATC AAATTGATTTTTTTGGATGCTGACAGAGGCACACTTATTCGTCGCTACAGTGACTCGCGGCGTTTACATCCGTTGTCCAC TCAAGATCTTTCCTTGGAAGCTGCGATTGATGCAGAAAGAAAATATTTAGACCCGCTCACACAACATGCGGATTTAATTA TTGACACCACTCGTCTTTCCACCCATGAATTAGCCGAGCGATTACGTGATTTTTTATGTGAAAAATCAGATAAAGCTTTA AAAATCATTTTTCAATCTTTCGGCTTTAAATATGGTTTACCCTTAGATGCCGATTATGTTTTCGACGTACGTTTTTTACC TAATCCACATTGGATTCCCGAATTACGCCCACTCACTGGCTTAGATGCGCCTGTTGCCGAGTTCTTAAATAAACAAAATG AAGTCAATCACTTTATTTATTTAACACGCAATTATATTGAAACCTGGTTACCTATGTTAGAACAAAATAACCGTAGCTAT CTGACAATTGCGATTGGCTGTACAGGAGGGAAACACCGTTCTGTCTATATCACCGAACAGTTAGGGGAATATTTCCAAGC TAAGGGGAAAAACGTGCAAATTCAGCATAAATCCTTAGCAAAACATAAAAAAGCGAATACACAATAA
Upstream 100 bases:
>100_bases AATGTGGATCAATTGAATACACAGGAAAACGTAATAAAAGCCTCAGCAGAAACAACAAAAGAAACAGAATAATCTGTTTC AGCTTAAAGGGGGAAAGCGT
Downstream 100 bases:
>100_bases GCTAACTTCGCGGTCTTAAATCCGTTACTTGGCTAACAATTTCGCCGTCTGCCAAACGCGTGATCACACGTTCACCGACA CTAACCTGCTTAAGTTGTGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 288; Mature: 288
Protein sequence:
>288_residues MEIIIISGHSGAGKSVALRCLEDIGYYCVDNLPLDLLPQLASILSTNQQSVAISLDIRNLPHSSKTLENLLTEVQQQHQI KLIFLDADRGTLIRRYSDSRRLHPLSTQDLSLEAAIDAERKYLDPLTQHADLIIDTTRLSTHELAERLRDFLCEKSDKAL KIIFQSFGFKYGLPLDADYVFDVRFLPNPHWIPELRPLTGLDAPVAEFLNKQNEVNHFIYLTRNYIETWLPMLEQNNRSY LTIAIGCTGGKHRSVYITEQLGEYFQAKGKNVQIQHKSLAKHKKANTQ
Sequences:
>Translated_288_residues MEIIIISGHSGAGKSVALRCLEDIGYYCVDNLPLDLLPQLASILSTNQQSVAISLDIRNLPHSSKTLENLLTEVQQQHQI KLIFLDADRGTLIRRYSDSRRLHPLSTQDLSLEAAIDAERKYLDPLTQHADLIIDTTRLSTHELAERLRDFLCEKSDKAL KIIFQSFGFKYGLPLDADYVFDVRFLPNPHWIPELRPLTGLDAPVAEFLNKQNEVNHFIYLTRNYIETWLPMLEQNNRSY LTIAIGCTGGKHRSVYITEQLGEYFQAKGKNVQIQHKSLAKHKKANTQ >Mature_288_residues MEIIIISGHSGAGKSVALRCLEDIGYYCVDNLPLDLLPQLASILSTNQQSVAISLDIRNLPHSSKTLENLLTEVQQQHQI KLIFLDADRGTLIRRYSDSRRLHPLSTQDLSLEAAIDAERKYLDPLTQHADLIIDTTRLSTHELAERLRDFLCEKSDKAL KIIFQSFGFKYGLPLDADYVFDVRFLPNPHWIPELRPLTGLDAPVAEFLNKQNEVNHFIYLTRNYIETWLPMLEQNNRSY LTIAIGCTGGKHRSVYITEQLGEYFQAKGKNVQIQHKSLAKHKKANTQ
Specific function: Displays ATPase and GTPase activities
COG id: COG1660
COG function: function code R; Predicted P-loop-containing kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0042 family
Homologues:
Organism=Escherichia coli, GI1789598, Length=283, Percent_Identity=62.1908127208481, Blast_Score=391, Evalue=1e-110,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y169_PASMU (Q9CP85)
Other databases:
- EMBL: AE004439 - RefSeq: NP_245106.1 - ProteinModelPortal: Q9CP85 - GeneID: 1243516 - GenomeReviews: AE004439_GR - KEGG: pmu:PM0169 - NMPDR: fig|272843.1.peg.169 - HOGENOM: HBG289732 - OMA: GIGCTGG - ProtClustDB: PRK05416 - BioCyc: PMUL272843:PM0169-MONOMER - HAMAP: MF_00636 - InterPro: IPR005337 - PIRSF: PIRSF005052
Pfam domain/function: PF03668 ATP_bind_2
EC number: NA
Molecular weight: Translated: 32882; Mature: 32882
Theoretical pI: Translated: 7.11; Mature: 7.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEIIIISGHSGAGKSVALRCLEDIGYYCVDNLPLDLLPQLASILSTNQQSVAISLDIRNL CEEEEEECCCCCCHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHCCCCCEEEEEEEECCC PHSSKTLENLLTEVQQQHQIKLIFLDADRGTLIRRYSDSRRLHPLSTQDLSLEAAIDAER CCCHHHHHHHHHHHHHCCCEEEEEEECCCCCEEEECCCCCCCCCCCCCCCEEEEHHCHHH KYLDPLTQHADLIIDTTRLSTHELAERLRDFLCEKSDKALKIIFQSFGFKYGLPLDADYV HHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCEECCCCCCCEE FDVRFLPNPHWIPELRPLTGLDAPVAEFLNKQNEVNHFIYLTRNYIETWLPMLEQNNRSY EEEEECCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCEEEEEEHHHHHHHHHHHHCCCCEE LTIAIGCTGGKHRSVYITEQLGEYFQAKGKNVQIQHKSLAKHKKANTQ EEEEEECCCCCCEEEEEHHHHHHHHHCCCCCEEEEHHHHHHHHCCCCC >Mature Secondary Structure MEIIIISGHSGAGKSVALRCLEDIGYYCVDNLPLDLLPQLASILSTNQQSVAISLDIRNL CEEEEEECCCCCCHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHCCCCCEEEEEEEECCC PHSSKTLENLLTEVQQQHQIKLIFLDADRGTLIRRYSDSRRLHPLSTQDLSLEAAIDAER CCCHHHHHHHHHHHHHCCCEEEEEEECCCCCEEEECCCCCCCCCCCCCCCEEEEHHCHHH KYLDPLTQHADLIIDTTRLSTHELAERLRDFLCEKSDKALKIIFQSFGFKYGLPLDADYV HHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCEECCCCCCCEE FDVRFLPNPHWIPELRPLTGLDAPVAEFLNKQNEVNHFIYLTRNYIETWLPMLEQNNRSY EEEEECCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCEEEEEEHHHHHHHHHHHHCCCCEE LTIAIGCTGGKHRSVYITEQLGEYFQAKGKNVQIQHKSLAKHKKANTQ EEEEEECCCCCCEEEEEHHHHHHHHHCCCCCEEEEHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11248100