Definition Lactococcus lactis subsp. lactis Il1403, complete genome.
Accession NC_002662
Length 2,365,589

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The map label for this gene is yedF

Identifier: 30023990

GI number: 30023990

Start: 437921

End: 439525

Strand: Direct

Name: yedF

Synonym: L37906

Alternate gene names: 30023990

Gene position: 437921-439525 (Clockwise)

Preceding gene: 15672408

Following gene: 15672410

Centisome position: 18.51

GC content: 39.25

Gene sequence:

>1605_bases
ATGAAATGCTTCATAGATAATGAAGCAAAAGGAGAACTTATGGCAAATTATTCACAACTTGCGACTGATATTATCGCAAA
TGTAGGTGGCGCTGAAAATGTCACAAAAGTTATTCATTGTATCACTCGTCTTCGTTTCACTTTAAAGGACAAGGATAAAG
CCGATACAGCAGCAATTGAAGCCTTACCTGGTGTGGCAGGCGCGGTTTATAATTCAAACTTGAATCAATATCAAGTGGTT
ATTGGACAAGCGGTTGAGGATGTTTATGATGAAGTTGTTGAACAACTTGGTGATGCGGTAGTTGATGATGAGGCAACGGC
ACAAGCAGTCGCTGTAACAGCACCAGCTAATGGTAAAAAACAAAATCCGATTGTTCATGCTTTCCAAGTGGTCATTGGAA
CAATTACTGGGTCAATGATTCCTATTATTGGTTTACTTGCAGCTGGTGGGATGATTAATGGTTTACTTAGTATCTTTGTT
AAGGGAAATCGCTTAATCGAAGTGATTGATCCTGCAAGTTCAACTTATGTCATTATTTCAACACTGGCAATGACGCCCTT
TTACTTCTTACCTGTTTTGGTTGGTTTTTCAGCAGCAAAACAATTGGCACCTAAAGATACTGTTTTACAATTTATTGGTG
CTGCAGTCGGCGGATTTATGATTAATCCAGGGATTACTAACTTGGTAAATGCGCATGTTGGAACGAATGCGGCAGGTAAA
AATGTTGTTGTTGAAGCAGCTGCTCCTGTTGCAAATTTCCTTGGAGTAACTTTTAATACAAGTTATTTTGGAATCCCCGT
TGCTTTGCCAAGCTATGCTTATACAATTTTCCCAATCATTGTAGCCGTGGCAATTGCTAAACCACTGAATGCTTGGTTGA
AAAAAGTTTTACCACTTGCCTTGCGTCCAATTTTCCAACCAATGATTACTTTCTTTATTACCGCATCAATTGTTTTACTT
TTGGTAGGTCCAGTAATTTCTACAATTTCTTCTGGATTGTCATTTGTGATTGATCATATCTTGTCATTGAATTTAGGAAT
TGCAAGTATTATCGTTGGTGGTTTGTATCAATGTTTGGTTATCTTTGGGTTGCACTGGTTGGTTGTACCACTTATTTCAC
AAGAATTGGCGGCTACTGGAGCAAGTTCACTCAATATGATTGTTTCTTTCACAATGCTCGCTCAAGGGGTTGGTGCCTTG
ACTGTCTTCTTTAAATCTAAAAAAGCAGACCTCAAAGGACTTTCTGCTCCAGCAGCAATTTCAGCCTTTTGTGGGGTAAC
TGAACCGGCAATGTATGGGATTAATTTGAAATATGTGCGTGTCTTTATCATGTCTTCAATTGGTGCCGCGATTGGTGCAG
GTGTTGCTGGATTTGGCGGATTACAAATGTTTGGGTTCTCAGGTTCTTTGATTGGTTTCCCTAACTTTATTTCTAATCCT
TTGACACATCACGCTCCTGCGGGTAACTTGATGCTCTTCTGGATCGCCACTGCGGTATGTGCGGTTGCAACTTTCCTATT
GGTTTGGTTCTTTGGTTATAAAGATACAGATGTAATGGGAGAAGGTGTTGAACAAAAAAATGCATTTAAAGATGCAGTTA
AATAA

Upstream 100 bases:

>100_bases
TAAGTAAAAATATCAACCAATAAATTTATAGCACAAAGAAGACGAGAACTTTGGATATAGATTTTGTGACTATTAAACTC
GTCAATTATTATTTTATATT

Downstream 100 bases:

>100_bases
TTAATAAACTCAGTTGGAGGCAGTGCTGATAAATTCTGCTTCCTTTAGTTTTATATGAGGGGGAAAAATGACTGAAAAAG
ATTGGATAATCCAATATGAT

Product: beta-glucoside-specific PTS system IIABC component

Products: NA

Alternate protein names: EIIBCA-Bgl; EII-Bgl; Beta-glucoside-specific phosphotransferase enzyme IIB component; PTS system beta-glucoside-specific EIIB component; Beta-glucoside permease IIC component; PTS system beta-glucoside-specific EIIC component; Beta-glucoside-specific phosphotransferase enzyme IIA component; PTS system beta-glucoside-specific EIIA component [H]

Number of amino acids: Translated: 534; Mature: 534

Protein sequence:

>534_residues
MKCFIDNEAKGELMANYSQLATDIIANVGGAENVTKVIHCITRLRFTLKDKDKADTAAIEALPGVAGAVYNSNLNQYQVV
IGQAVEDVYDEVVEQLGDAVVDDEATAQAVAVTAPANGKKQNPIVHAFQVVIGTITGSMIPIIGLLAAGGMINGLLSIFV
KGNRLIEVIDPASSTYVIISTLAMTPFYFLPVLVGFSAAKQLAPKDTVLQFIGAAVGGFMINPGITNLVNAHVGTNAAGK
NVVVEAAAPVANFLGVTFNTSYFGIPVALPSYAYTIFPIIVAVAIAKPLNAWLKKVLPLALRPIFQPMITFFITASIVLL
LVGPVISTISSGLSFVIDHILSLNLGIASIIVGGLYQCLVIFGLHWLVVPLISQELAATGASSLNMIVSFTMLAQGVGAL
TVFFKSKKADLKGLSAPAAISAFCGVTEPAMYGINLKYVRVFIMSSIGAAIGAGVAGFGGLQMFGFSGSLIGFPNFISNP
LTHHAPAGNLMLFWIATAVCAVATFLLVWFFGYKDTDVMGEGVEQKNAFKDAVK

Sequences:

>Translated_534_residues
MKCFIDNEAKGELMANYSQLATDIIANVGGAENVTKVIHCITRLRFTLKDKDKADTAAIEALPGVAGAVYNSNLNQYQVV
IGQAVEDVYDEVVEQLGDAVVDDEATAQAVAVTAPANGKKQNPIVHAFQVVIGTITGSMIPIIGLLAAGGMINGLLSIFV
KGNRLIEVIDPASSTYVIISTLAMTPFYFLPVLVGFSAAKQLAPKDTVLQFIGAAVGGFMINPGITNLVNAHVGTNAAGK
NVVVEAAAPVANFLGVTFNTSYFGIPVALPSYAYTIFPIIVAVAIAKPLNAWLKKVLPLALRPIFQPMITFFITASIVLL
LVGPVISTISSGLSFVIDHILSLNLGIASIIVGGLYQCLVIFGLHWLVVPLISQELAATGASSLNMIVSFTMLAQGVGAL
TVFFKSKKADLKGLSAPAAISAFCGVTEPAMYGINLKYVRVFIMSSIGAAIGAGVAGFGGLQMFGFSGSLIGFPNFISNP
LTHHAPAGNLMLFWIATAVCAVATFLLVWFFGYKDTDVMGEGVEQKNAFKDAVK
>Mature_534_residues
MKCFIDNEAKGELMANYSQLATDIIANVGGAENVTKVIHCITRLRFTLKDKDKADTAAIEALPGVAGAVYNSNLNQYQVV
IGQAVEDVYDEVVEQLGDAVVDDEATAQAVAVTAPANGKKQNPIVHAFQVVIGTITGSMIPIIGLLAAGGMINGLLSIFV
KGNRLIEVIDPASSTYVIISTLAMTPFYFLPVLVGFSAAKQLAPKDTVLQFIGAAVGGFMINPGITNLVNAHVGTNAAGK
NVVVEAAAPVANFLGVTFNTSYFGIPVALPSYAYTIFPIIVAVAIAKPLNAWLKKVLPLALRPIFQPMITFFITASIVLL
LVGPVISTISSGLSFVIDHILSLNLGIASIIVGGLYQCLVIFGLHWLVVPLISQELAATGASSLNMIVSFTMLAQGVGAL
TVFFKSKKADLKGLSAPAAISAFCGVTEPAMYGINLKYVRVFIMSSIGAAIGAGVAGFGGLQMFGFSGSLIGFPNFISNP
LTHHAPAGNLMLFWIATAVCAVATFLLVWFFGYKDTDVMGEGVEQKNAFKDAVK

Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. This

COG id: COG1263

COG function: function code G; Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PTS EIIC type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1790159, Length=449, Percent_Identity=30.2895322939866, Blast_Score=200, Evalue=2e-52,
Organism=Escherichia coli, GI48994906, Length=521, Percent_Identity=28.0230326295585, Blast_Score=171, Evalue=1e-43,
Organism=Escherichia coli, GI2367362, Length=456, Percent_Identity=28.0701754385965, Blast_Score=160, Evalue=1e-40,
Organism=Escherichia coli, GI1788769, Length=518, Percent_Identity=26.2548262548263, Blast_Score=91, Evalue=1e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR018113
- InterPro:   IPR001127
- InterPro:   IPR001996
- InterPro:   IPR003352
- InterPro:   IPR013013
- InterPro:   IPR011297 [H]

Pfam domain/function: PF00358 PTS_EIIA_1; PF00367 PTS_EIIB; PF02378 PTS_EIIC [H]

EC number: =2.7.1.69 [H]

Molecular weight: Translated: 56076; Mature: 56076

Theoretical pI: Translated: 6.87; Mature: 6.87

Prosite motif: PS01035 PTS_EIIB_TYPE_1_CYS ; PS51098 PTS_EIIB_TYPE_1 ; PS51103 PTS_EIIC_TYPE_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKCFIDNEAKGELMANYSQLATDIIANVGGAENVTKVIHCITRLRFTLKDKDKADTAAIE
CCEEECCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
ALPGVAGAVYNSNLNQYQVVIGQAVEDVYDEVVEQLGDAVVDDEATAQAVAVTAPANGKK
HCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCCCCEEEEECCCCCCC
QNPIVHAFQVVIGTITGSMIPIIGLLAAGGMINGLLSIFVKGNRLIEVIDPASSTYVIIS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCEEHHH
TLAMTPFYFLPVLVGFSAAKQLAPKDTVLQFIGAAVGGFMINPGITNLVNAHVGTNAAGK
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCEEECCCHHHHHHHCCCCCCCCC
NVVVEAAAPVANFLGVTFNTSYFGIPVALPSYAYTIFPIIVAVAIAKPLNAWLKKVLPLA
CEEEEEHHHHHHHHCCEECCCEEECCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LRPIFQPMITFFITASIVLLLVGPVISTISSGLSFVIDHILSLNLGIASIIVGGLYQCLV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IFGLHWLVVPLISQELAATGASSLNMIVSFTMLAQGVGALTVFFKSKKADLKGLSAPAAI
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHEEEEEECCCCCCCCCCCCHHH
SAFCGVTEPAMYGINLKYVRVFIMSSIGAAIGAGVAGFGGLQMFGFSGSLIGFPNFISNP
HHHHCCCCCHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCHHHCCC
LTHHAPAGNLMLFWIATAVCAVATFLLVWFFGYKDTDVMGEGVEQKNAFKDAVK
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCHHHHHHHHHCC
>Mature Secondary Structure
MKCFIDNEAKGELMANYSQLATDIIANVGGAENVTKVIHCITRLRFTLKDKDKADTAAIE
CCEEECCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
ALPGVAGAVYNSNLNQYQVVIGQAVEDVYDEVVEQLGDAVVDDEATAQAVAVTAPANGKK
HCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCCCCEEEEECCCCCCC
QNPIVHAFQVVIGTITGSMIPIIGLLAAGGMINGLLSIFVKGNRLIEVIDPASSTYVIIS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCEEHHH
TLAMTPFYFLPVLVGFSAAKQLAPKDTVLQFIGAAVGGFMINPGITNLVNAHVGTNAAGK
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCEEECCCHHHHHHHCCCCCCCCC
NVVVEAAAPVANFLGVTFNTSYFGIPVALPSYAYTIFPIIVAVAIAKPLNAWLKKVLPLA
CEEEEEHHHHHHHHCCEECCCEEECCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LRPIFQPMITFFITASIVLLLVGPVISTISSGLSFVIDHILSLNLGIASIIVGGLYQCLV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IFGLHWLVVPLISQELAATGASSLNMIVSFTMLAQGVGALTVFFKSKKADLKGLSAPAAI
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHEEEEEECCCCCCCCCCCCHHH
SAFCGVTEPAMYGINLKYVRVFIMSSIGAAIGAGVAGFGGLQMFGFSGSLIGFPNFISNP
HHHHCCCCCHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCHHHCCC
LTHHAPAGNLMLFWIATAVCAVATFLLVWFFGYKDTDVMGEGVEQKNAFKDAVK
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11058132 [H]