Definition | Lactococcus lactis subsp. lactis Il1403, complete genome. |
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Accession | NC_002662 |
Length | 2,365,589 |
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The map label for this gene is ytgG
Identifier: 15673883
GI number: 15673883
Start: 1968989
End: 1969702
Strand: Reverse
Name: ytgG
Synonym: L152419
Alternate gene names: 15673883
Gene position: 1969702-1968989 (Counterclockwise)
Preceding gene: 30024061
Following gene: 15673882
Centisome position: 83.26
GC content: 35.29
Gene sequence:
>714_bases ATGAAAAAAATAATCACTAAAGATTACGCCACAATGAGTGAACTTGCTGCAGCGATTGTTCTTGATAAGATGATGCTTTC AAAAAGGGTAAATCTTTCGCTTACAGCGGGAAATACCCCTCTTGGAATGTATGAAATTCTTATTGATAAACTCCAAAAAA TGAATTTTGATCGCTCAAATATCCATTATTACAATTTTGATGAAGTACCACTTGCTGGTGAACGCTATGGATTAACAATG AGTGCTTTAAAGACAGCTTTTTATGATCGAGTACATATTGATGATGGTAATCTTCATGAATTAAATGCTCAAAATAATCA AGTTTTTGATCAAAAAATCTTACAGGACGGTGGGATTGATTTGATTGTTATGGGGATAGGAGAAGATGGTCATTTTTGTG CAAATATGCCTGGACATACAAGCTTTGAGCGAGAAATTTTTGCTGTTCCATTTGAAGAAGGGGATGAGATTTATCAGTCA ATCAAAAATTTGACAGATAAAGAACCGGCTTCTCCTTATGTCACTTTTGGTCCACGAACAGTTCTAGCTAGCAAGCAACT TTTAGTTTTTGCTGACGGAAAAAAGAAAGCAGAGATTATGAAAAAAGTTCTTGAGGGGCCAATCACAGAAGAAATTCCAG CTTCTATTTTACGGACGCATCCAAATGTTACTTTTATTTTGGATGAAGAAGCCGCTGCTTTACTTGAAAATTAG
Upstream 100 bases:
>100_bases AAAAGCGGATTTCCGCTTTTTTTATTTTCAACGAGTAGAATTGCTTTAAATAGAATACTTAATCCTGTAAAATAGAAGTA ACAAGAAAAAAGGAGCTTCT
Downstream 100 bases:
>100_bases TTGATGAAGACAGTTAGTAAAATAACTGTTTTTATTTATTCGTAAAGGAGGTCAATTTATGATGACATAATTGACTCTAA ATTATTCTGAAAGCGTTACA
Product: putative 6-phosphogluconolactonase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 237; Mature: 237
Protein sequence:
>237_residues MKKIITKDYATMSELAAAIVLDKMMLSKRVNLSLTAGNTPLGMYEILIDKLQKMNFDRSNIHYYNFDEVPLAGERYGLTM SALKTAFYDRVHIDDGNLHELNAQNNQVFDQKILQDGGIDLIVMGIGEDGHFCANMPGHTSFEREIFAVPFEEGDEIYQS IKNLTDKEPASPYVTFGPRTVLASKQLLVFADGKKKAEIMKKVLEGPITEEIPASILRTHPNVTFILDEEAAALLEN
Sequences:
>Translated_237_residues MKKIITKDYATMSELAAAIVLDKMMLSKRVNLSLTAGNTPLGMYEILIDKLQKMNFDRSNIHYYNFDEVPLAGERYGLTM SALKTAFYDRVHIDDGNLHELNAQNNQVFDQKILQDGGIDLIVMGIGEDGHFCANMPGHTSFEREIFAVPFEEGDEIYQS IKNLTDKEPASPYVTFGPRTVLASKQLLVFADGKKKAEIMKKVLEGPITEEIPASILRTHPNVTFILDEEAAALLEN >Mature_237_residues MKKIITKDYATMSELAAAIVLDKMMLSKRVNLSLTAGNTPLGMYEILIDKLQKMNFDRSNIHYYNFDEVPLAGERYGLTM SALKTAFYDRVHIDDGNLHELNAQNNQVFDQKILQDGGIDLIVMGIGEDGHFCANMPGHTSFEREIFAVPFEEGDEIYQS IKNLTDKEPASPYVTFGPRTVLASKQLLVFADGKKKAEIMKKVLEGPITEEIPASILRTHPNVTFILDEEAAALLEN
Specific function: Unknown
COG id: COG0363
COG function: function code G; 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glucosamine/galactosamine-6-phosphate isomerase family [H]
Homologues:
Organism=Homo sapiens, GI13027378, Length=246, Percent_Identity=29.2682926829268, Blast_Score=91, Evalue=1e-18, Organism=Homo sapiens, GI19923881, Length=246, Percent_Identity=28.8617886178862, Blast_Score=89, Evalue=3e-18, Organism=Escherichia coli, GI48994958, Length=232, Percent_Identity=40.948275862069, Blast_Score=179, Evalue=1e-46, Organism=Escherichia coli, GI1789530, Length=228, Percent_Identity=24.1228070175439, Blast_Score=79, Evalue=4e-16, Organism=Escherichia coli, GI1786893, Length=214, Percent_Identity=25.2336448598131, Blast_Score=64, Evalue=7e-12, Organism=Caenorhabditis elegans, GI17554876, Length=242, Percent_Identity=28.099173553719, Blast_Score=88, Evalue=4e-18, Organism=Drosophila melanogaster, GI24581960, Length=251, Percent_Identity=28.6852589641434, Blast_Score=84, Evalue=1e-16, Organism=Drosophila melanogaster, GI19920764, Length=251, Percent_Identity=28.6852589641434, Blast_Score=84, Evalue=1e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006148 - InterPro: IPR004547 - InterPro: IPR018321 [H]
Pfam domain/function: PF01182 Glucosamine_iso [H]
EC number: NA
Molecular weight: Translated: 26546; Mature: 26546
Theoretical pI: Translated: 4.79; Mature: 4.79
Prosite motif: PS01161 GLC_GALNAC_ISOMERASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKIITKDYATMSELAAAIVLDKMMLSKRVNLSLTAGNTPLGMYEILIDKLQKMNFDRSN CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHCCCCCCC IHYYNFDEVPLAGERYGLTMSALKTAFYDRVHIDDGNLHELNAQNNQVFDQKILQDGGID CEEECCCCCCCCCCCCCHHHHHHHHHHHCEEECCCCCEEEECCCCCHHHHHHHHHCCCCE LIVMGIGEDGHFCANMPGHTSFEREIFAVPFEEGDEIYQSIKNLTDKEPASPYVTFGPRT EEEEEECCCCCEEECCCCCCCCCCEEEECCCCCHHHHHHHHHHCCCCCCCCCEEEECCEE VLASKQLLVFADGKKKAEIMKKVLEGPITEEIPASILRTHPNVTFILDEEAAALLEN EECCCEEEEEECCCHHHHHHHHHHCCCCCHHHHHHHHHCCCCEEEEECCHHHHHHCC >Mature Secondary Structure MKKIITKDYATMSELAAAIVLDKMMLSKRVNLSLTAGNTPLGMYEILIDKLQKMNFDRSN CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHCCCCCCC IHYYNFDEVPLAGERYGLTMSALKTAFYDRVHIDDGNLHELNAQNNQVFDQKILQDGGID CEEECCCCCCCCCCCCCHHHHHHHHHHHCEEECCCCCEEEECCCCCHHHHHHHHHCCCCE LIVMGIGEDGHFCANMPGHTSFEREIFAVPFEEGDEIYQSIKNLTDKEPASPYVTFGPRT EEEEEECCCCCEEECCCCCCCCCCEEEECCCCCHHHHHHHHHHCCCCCCCCCEEEECCEE VLASKQLLVFADGKKKAEIMKKVLEGPITEEIPASILRTHPNVTFILDEEAAALLEN EECCCEEEEEECCCHHHHHHHHHHCCCCCHHHHHHHHHCCCCEEEEECCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7686882; 9278503 [H]