Definition | Lactococcus lactis subsp. lactis Il1403, complete genome. |
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Accession | NC_002662 |
Length | 2,365,589 |
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The map label for this gene is ytcB
Identifier: 15673836
GI number: 15673836
Start: 1920926
End: 1921696
Strand: Reverse
Name: ytcB
Synonym: L104285
Alternate gene names: NA
Gene position: 1921696-1920926 (Counterclockwise)
Preceding gene: 15673837
Following gene: 15673835
Centisome position: 81.24
GC content: 33.46
Gene sequence:
>771_bases ATGTCAAATTATAATTTCAATCCAGAACTAGATGAACGTTTGCGAGTTTCATTAGCAAATCCAGGCTCATTTATGGAAGA CCTCTCATTGGTCTATGCTTTTCATCAATTTCCAGTATTGGCACCAAAATCAGTTTTCTTTGTTCCGATTGAAGACCATA AGGCACTACCTGTTTTTACAACAGAAGAAGAACTTGAAGTTTTCCTGTCAGAACTGACAGACTTTGAGACGGAATGGGAA TTGCACTCATTAATTGAAATTTTAGACCAATTAATGGAAACGGATATTGATATTTTAGCAATCAATCCTAAATTACCTCA AGATGAAGATAAAGGCAACACCGTTTACTTTGGGACACCAGAATTAATGCAATTTTTAGTTCATTATACTGAAATTTTGA ATAAAGTTTTTAGTCCGGAAAATCTTGAGGCTGAACAAAGAGAAAAATATTATTTCGTTCCAGCTTTCGTCACAACAAGT GGTCAGAGAACTTTCCCTAATCTAATCAATCAGGACAATGAAGAATATCTTCCTTTGTTTGATAATTTAGATAGTTTGGC TAAATGGCACAATGAAGCCTACTTTAGTCAAGCCTTTAAGGAAAATAATGGACAAGTTCTACTTTTAAAAATTGATGAAT TATTAAATGGAGAAGATGAAGCCATAAATGACTTAGGAAAAAGCCTAGGAATTACTGTAAATCCTTTGGACTACTCACAA GAAGAAGTTCAAAATTCAATGGTCACTTGGGAAGAATTAACAAGAGATTAA
Upstream 100 bases:
>100_bases GATAACCGAAATGTGATTATTCATGCTTGGATTTCTGTCAGTAAATTATTTGTTTATTTAGCTTGTAAATAATCACTGAC AGGTCTGTCAGCAAAAAAAT
Downstream 100 bases:
>100_bases ATCAATTGAAAGCTTGATTTAGTCAATTACACGTTTTTGAATCAACAAGGCCCACAATGCTTATGGTATAATTTACTATA AGTATTTTTTAACGAAGTAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 256; Mature: 255
Protein sequence:
>256_residues MSNYNFNPELDERLRVSLANPGSFMEDLSLVYAFHQFPVLAPKSVFFVPIEDHKALPVFTTEEELEVFLSELTDFETEWE LHSLIEILDQLMETDIDILAINPKLPQDEDKGNTVYFGTPELMQFLVHYTEILNKVFSPENLEAEQREKYYFVPAFVTTS GQRTFPNLINQDNEEYLPLFDNLDSLAKWHNEAYFSQAFKENNGQVLLLKIDELLNGEDEAINDLGKSLGITVNPLDYSQ EEVQNSMVTWEELTRD
Sequences:
>Translated_256_residues MSNYNFNPELDERLRVSLANPGSFMEDLSLVYAFHQFPVLAPKSVFFVPIEDHKALPVFTTEEELEVFLSELTDFETEWE LHSLIEILDQLMETDIDILAINPKLPQDEDKGNTVYFGTPELMQFLVHYTEILNKVFSPENLEAEQREKYYFVPAFVTTS GQRTFPNLINQDNEEYLPLFDNLDSLAKWHNEAYFSQAFKENNGQVLLLKIDELLNGEDEAINDLGKSLGITVNPLDYSQ EEVQNSMVTWEELTRD >Mature_255_residues SNYNFNPELDERLRVSLANPGSFMEDLSLVYAFHQFPVLAPKSVFFVPIEDHKALPVFTTEEELEVFLSELTDFETEWEL HSLIEILDQLMETDIDILAINPKLPQDEDKGNTVYFGTPELMQFLVHYTEILNKVFSPENLEAEQREKYYFVPAFVTTSG QRTFPNLINQDNEEYLPLFDNLDSLAKWHNEAYFSQAFKENNGQVLLLKIDELLNGEDEAINDLGKSLGITVNPLDYSQE EVQNSMVTWEELTRD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29675; Mature: 29544
Theoretical pI: Translated: 3.88; Mature: 3.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNYNFNPELDERLRVSLANPGSFMEDLSLVYAFHQFPVLAPKSVFFVPIEDHKALPVFT CCCCCCCCCCCHHHEEEECCCCHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCEEE TEEELEVFLSELTDFETEWELHSLIEILDQLMETDIDILAINPKLPQDEDKGNTVYFGTP CHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCEEEECCH ELMQFLVHYTEILNKVFSPENLEAEQREKYYFVPAFVTTSGQRTFPNLINQDNEEYLPLF HHHHHHHHHHHHHHHHCCCCCCCHHHCCCEEEEEEEEECCCCCCCHHHHCCCCCCCCCHH DNLDSLAKWHNEAYFSQAFKENNGQVLLLKIDELLNGEDEAINDLGKSLGITVNPLDYSQ CCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHCCCHHHHHHHHHHCCCEECCCCCCH EEVQNSMVTWEELTRD HHHHHHHHHHHHHHCC >Mature Secondary Structure SNYNFNPELDERLRVSLANPGSFMEDLSLVYAFHQFPVLAPKSVFFVPIEDHKALPVFT CCCCCCCCCCHHHEEEECCCCHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCEEE TEEELEVFLSELTDFETEWELHSLIEILDQLMETDIDILAINPKLPQDEDKGNTVYFGTP CHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCEEEECCH ELMQFLVHYTEILNKVFSPENLEAEQREKYYFVPAFVTTSGQRTFPNLINQDNEEYLPLF HHHHHHHHHHHHHHHHCCCCCCCHHHCCCEEEEEEEEECCCCCCCHHHHCCCCCCCCCHH DNLDSLAKWHNEAYFSQAFKENNGQVLLLKIDELLNGEDEAINDLGKSLGITVNPLDYSQ CCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHCCCHHHHHHHHHHCCCEECCCCCCH EEVQNSMVTWEELTRD HHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA