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The map label for this gene is ysgC

Identifier: 15673787

GI number: 15673787

Start: 1868710

End: 1870383

Strand: Reverse

Name: ysgC

Synonym: L52064

Alternate gene names: 15673787

Gene position: 1870383-1868710 (Counterclockwise)

Preceding gene: 15673789

Following gene: 15673786

Centisome position: 79.07

GC content: 38.11

Gene sequence:

>1674_bases
ATGGAAGATTCAGAAAAAATAATGAATACAGGTCAGCAGTCACCAAAAACGGCTGCAAAATCAAAAGATCAGATGCTCTC
TGGTGCTGCTTGGCGGACTGGTGCGGACATGATTGGGAAAATACTAGGGGTAATTTATATTATTCCTTGGTATGCTTGGA
TGGGGCGTTTTGGTAATGAGGCCAACTCCCTCTTTAGTATGGGTTATAATATCTATGCTCTTTTCCTATTGATTTCAACA
GTGGGGATTCCGGCGGCAATTGCGCGTGAAGTGGCTCGCTATAATACATTAGATGACCCTAACATGGCTTACCGGCTCGT
TCGGCAAATGCTCGGAGTGATGCTGGTTCTTGGAATTGTTGCGTCAGGGCTCATGTTCTTTCTTGCAGGTCCACTCTCAG
CCCTTGTTGGCGGTAAGGATAGCGCAGATTTAATTCCAGTCATGAAAAGTTTAGCATTGGCTGTCTTGATTTTCCCTTCA
ATGTCAGTTATTCGAGGATATTTCCAAGGTCTGAATCAGGTGAAAGCTTATGCGATGAGTCAGCTTTTGGAACAAATTGT
TCGGGTCATTTGGATGCTAGCAGCAACTTTTGCTATCATGAAGTTAGGTTCGCATAATTGGCAAAATGCCGTGACACAAT
CTACCTTGGCTGCTTTTATTGGGATGTTAGGTTCCTACGCTGTATTATTCTATTACTTACAGAAATCAGGAAATCTTAAT
AAATTAATTAATCCTGGTCCTGTAAAATCTAAAATTAATGCTTTAGAAATTTTTAGATCAACATTACACACAGCCATTCC
ATTTATTGTCATTGGTTCAGCTATTCAAATTTTTAAAATTATTGATAACTCAACCTTTATGAATATGATGCCTTGGGTAA
CAAACTATAGTCATAATGAATTGCTTGTTCTGATGAGTTATTTCTCAGCAAATACTGATAAATTAACGATGGTCTTGTTG
GGTGTCGCATTGACGCTTGGTTCTGTTTCAGACCCTCTGATTACAGAGCACTATGTTCAAGGAAATCGGCGTGAACTTGC
AACGTTAGTAGGTTATAATTTCCAATTATACGTTGGTTTTATGCTTCCTGCCGTGATTGGAATGTCACTATTGACTAAAC
CGATTTATACAATTTTCTACCAAATTCCTTCTGGATTACAAAGTAGTTTGTTTGTCTTTGCTATTTTACAAACCTTCTTG
TTGGGACTTTATATGATTGTCTATCCTCCACTGACAGTAATGGACCATAAACGTTTGGCAATGCGAATCTTTACCTTGAC
TCTTGTCATTAAATTAGTTTTGCAAGTTCCAATGATTCTTATTTTCCATACTTATGGACCTTTACTTGCGACCACTGTTT
CATTCTTAGTTGGTGTTTTCTTATTCATTAGAAAACTACATGAGTTAACTCATTTTTCAATTAAGAATACAGTTCGCGGA
ATTCAAGGGGCAACTTTACTGACAGGATTTATGGCTATTGTGGTTATTATTGTTGAAATCATTTTAGGTTTTATTTTCGG
TAAGAGCCCAGGTCGAATTGCCTCAGTATTTATTGCTGCCATTGCCGGTGGTGCAGGATTTTATACTTATCTCTGGTTTG
CTGCTAAACTTGGACTTCTAGAAAAATGGTTTGGTCCAAGAGGTTTGTCACTTCGTCGAAAATTACATATCTAA

Upstream 100 bases:

>100_bases
GTCCCATTTGTTTATAGATGGTAATAGATGACATCGTGAATTAATGATCTAAAACCATTCTTTTATTGTCAAAATACAGA
ACTTAGGGTAAAATGGAACA

Downstream 100 bases:

>100_bases
TAAAAAATAAGTCTGTCAGTAAAAAAGTTACTGACAGACTTATTAATAAGAGTTAAAAAGGATAATAAATGGCAGAAATT
ACCGAAAATACAAAAAAGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 557; Mature: 557

Protein sequence:

>557_residues
MEDSEKIMNTGQQSPKTAAKSKDQMLSGAAWRTGADMIGKILGVIYIIPWYAWMGRFGNEANSLFSMGYNIYALFLLIST
VGIPAAIAREVARYNTLDDPNMAYRLVRQMLGVMLVLGIVASGLMFFLAGPLSALVGGKDSADLIPVMKSLALAVLIFPS
MSVIRGYFQGLNQVKAYAMSQLLEQIVRVIWMLAATFAIMKLGSHNWQNAVTQSTLAAFIGMLGSYAVLFYYLQKSGNLN
KLINPGPVKSKINALEIFRSTLHTAIPFIVIGSAIQIFKIIDNSTFMNMMPWVTNYSHNELLVLMSYFSANTDKLTMVLL
GVALTLGSVSDPLITEHYVQGNRRELATLVGYNFQLYVGFMLPAVIGMSLLTKPIYTIFYQIPSGLQSSLFVFAILQTFL
LGLYMIVYPPLTVMDHKRLAMRIFTLTLVIKLVLQVPMILIFHTYGPLLATTVSFLVGVFLFIRKLHELTHFSIKNTVRG
IQGATLLTGFMAIVVIIVEIILGFIFGKSPGRIASVFIAAIAGGAGFYTYLWFAAKLGLLEKWFGPRGLSLRRKLHI

Sequences:

>Translated_557_residues
MEDSEKIMNTGQQSPKTAAKSKDQMLSGAAWRTGADMIGKILGVIYIIPWYAWMGRFGNEANSLFSMGYNIYALFLLIST
VGIPAAIAREVARYNTLDDPNMAYRLVRQMLGVMLVLGIVASGLMFFLAGPLSALVGGKDSADLIPVMKSLALAVLIFPS
MSVIRGYFQGLNQVKAYAMSQLLEQIVRVIWMLAATFAIMKLGSHNWQNAVTQSTLAAFIGMLGSYAVLFYYLQKSGNLN
KLINPGPVKSKINALEIFRSTLHTAIPFIVIGSAIQIFKIIDNSTFMNMMPWVTNYSHNELLVLMSYFSANTDKLTMVLL
GVALTLGSVSDPLITEHYVQGNRRELATLVGYNFQLYVGFMLPAVIGMSLLTKPIYTIFYQIPSGLQSSLFVFAILQTFL
LGLYMIVYPPLTVMDHKRLAMRIFTLTLVIKLVLQVPMILIFHTYGPLLATTVSFLVGVFLFIRKLHELTHFSIKNTVRG
IQGATLLTGFMAIVVIIVEIILGFIFGKSPGRIASVFIAAIAGGAGFYTYLWFAAKLGLLEKWFGPRGLSLRRKLHI
>Mature_557_residues
MEDSEKIMNTGQQSPKTAAKSKDQMLSGAAWRTGADMIGKILGVIYIIPWYAWMGRFGNEANSLFSMGYNIYALFLLIST
VGIPAAIAREVARYNTLDDPNMAYRLVRQMLGVMLVLGIVASGLMFFLAGPLSALVGGKDSADLIPVMKSLALAVLIFPS
MSVIRGYFQGLNQVKAYAMSQLLEQIVRVIWMLAATFAIMKLGSHNWQNAVTQSTLAAFIGMLGSYAVLFYYLQKSGNLN
KLINPGPVKSKINALEIFRSTLHTAIPFIVIGSAIQIFKIIDNSTFMNMMPWVTNYSHNELLVLMSYFSANTDKLTMVLL
GVALTLGSVSDPLITEHYVQGNRRELATLVGYNFQLYVGFMLPAVIGMSLLTKPIYTIFYQIPSGLQSSLFVFAILQTFL
LGLYMIVYPPLTVMDHKRLAMRIFTLTLVIKLVLQVPMILIFHTYGPLLATTVSFLVGVFLFIRKLHELTHFSIKNTVRG
IQGATLLTGFMAIVVIIVEIILGFIFGKSPGRIASVFIAAIAGGAGFYTYLWFAAKLGLLEKWFGPRGLSLRRKLHI

Specific function: May play a role in cell division, although it is not essential for growth [H]

COG id: COG2244

COG function: function code R; Membrane protein involved in the export of O-antigen and teichoic acid

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential). Note=Localizes at the septum [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polysaccharide synthase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002797 [H]

Pfam domain/function: PF01943 Polysacc_synt [H]

EC number: NA

Molecular weight: Translated: 61629; Mature: 61629

Theoretical pI: Translated: 10.26; Mature: 10.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHCCCCCCCHHHHCCC
>Mature Secondary Structure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HHHCCCCCCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]