Definition | Lactococcus lactis subsp. lactis Il1403, complete genome. |
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Accession | NC_002662 |
Length | 2,365,589 |
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The map label for this gene is hemH
Identifier: 15673549
GI number: 15673549
Start: 1608782
End: 1609726
Strand: Reverse
Name: hemH
Synonym: L0194
Alternate gene names: 15673549
Gene position: 1609726-1608782 (Counterclockwise)
Preceding gene: 15673550
Following gene: 15673548
Centisome position: 68.05
GC content: 34.39
Gene sequence:
>945_bases ATGGATAAGAAAAAAGGAATCTTATTAGTAGCTTTGGGAACTCCGCGCTCATGTGAAGCAGATGATGTGAGGGATTATTT AAAAGAATTTTTGGGTGACCCTCTTGTTATACAAAAACCAAGATGGCTTTGGTTGCCGATTTTAAATGGAATTATTTTAA AAGTTAGACCGCAAAAATCAGCAGAGATGTATAAAAAAATCTGGACAGATGAAGGTTCCCCTTTGATGATTTACACAGTA GCACAAGCAAAGCAACTACAGGATATGCGCGAAGATTTTGATGTTCGTTTTGCCATGACTTACGGAGAGCCACGCATTGA TAAAGTAATCGCTGAGATGAAAGAATCTGGTGTTGAAGAAATTACTGTTCTTCCACTTTACCCTCAATATTCTTTAACAA CAGTTGAACCTGTAATTCAACAAGTTAAAAAAATTGATGATAAGATAAAAGTAATTAGAGATTTCCACAAAGTAGAATCT TATAGCGATTTACTTGCAGAGTCTATTAGAGAAAAGTGGCAAGCAAATGACTATGATAAATTGGTCCTTAGCTATCATGG AATTCCCTTGTCCTACGTGACCAAGAAAAAAGATGCTTATGAAGAGCAATGTAAAGAAACAACACGTTTGGTAGTAAGTA AACTTGGTTTGAGGGAAGAAGAATACGAGCATACTTATCAATCAAAATTTGGTCCTGAAAAATGGTTAGAACCTGCGACT ATTGATAGAGTTGCTGAACTTCCCAAAGAAAATGCTAAAAAAGTATTGATCTGTTCACCAGCATTCGTTGCAGATTGTTT AGAAACTTTATTTGAATTAGAAATTGAAAATAAAGAAGTATTTGTTGAAAATGGCGGAGAAACATTTGATTTTGTTCATC CTTTTAATGACTCTTTAGACTTTACTAGAGTATTAAGTGAAGTAGTTGACCAAAATAGACTCTGA
Upstream 100 bases:
>100_bases TTGTATGAAAAATTATGCTAGAATGAAAAATATTGATTAACAATTGTAGATACAATCGGTTATAAATATAAATAAACTGA TTTTTTATATAGGTGGAATA
Downstream 100 bases:
>100_bases GAAATAAAATCATTATTTTATTAGTTTTGGCCTTTAAATTTTATAACATTACTAAAGAGAAATAGGATTTGTTATAATGG TTCATAATATGCTAAAAATA
Product: ferrochelatase
Products: NA
Alternate protein names: Heme synthase; Protoheme ferro-lyase
Number of amino acids: Translated: 314; Mature: 314
Protein sequence:
>314_residues MDKKKGILLVALGTPRSCEADDVRDYLKEFLGDPLVIQKPRWLWLPILNGIILKVRPQKSAEMYKKIWTDEGSPLMIYTV AQAKQLQDMREDFDVRFAMTYGEPRIDKVIAEMKESGVEEITVLPLYPQYSLTTVEPVIQQVKKIDDKIKVIRDFHKVES YSDLLAESIREKWQANDYDKLVLSYHGIPLSYVTKKKDAYEEQCKETTRLVVSKLGLREEEYEHTYQSKFGPEKWLEPAT IDRVAELPKENAKKVLICSPAFVADCLETLFELEIENKEVFVENGGETFDFVHPFNDSLDFTRVLSEVVDQNRL
Sequences:
>Translated_314_residues MDKKKGILLVALGTPRSCEADDVRDYLKEFLGDPLVIQKPRWLWLPILNGIILKVRPQKSAEMYKKIWTDEGSPLMIYTV AQAKQLQDMREDFDVRFAMTYGEPRIDKVIAEMKESGVEEITVLPLYPQYSLTTVEPVIQQVKKIDDKIKVIRDFHKVES YSDLLAESIREKWQANDYDKLVLSYHGIPLSYVTKKKDAYEEQCKETTRLVVSKLGLREEEYEHTYQSKFGPEKWLEPAT IDRVAELPKENAKKVLICSPAFVADCLETLFELEIENKEVFVENGGETFDFVHPFNDSLDFTRVLSEVVDQNRL >Mature_314_residues MDKKKGILLVALGTPRSCEADDVRDYLKEFLGDPLVIQKPRWLWLPILNGIILKVRPQKSAEMYKKIWTDEGSPLMIYTV AQAKQLQDMREDFDVRFAMTYGEPRIDKVIAEMKESGVEEITVLPLYPQYSLTTVEPVIQQVKKIDDKIKVIRDFHKVES YSDLLAESIREKWQANDYDKLVLSYHGIPLSYVTKKKDAYEEQCKETTRLVVSKLGLREEEYEHTYQSKFGPEKWLEPAT IDRVAELPKENAKKVLICSPAFVADCLETLFELEIENKEVFVENGGETFDFVHPFNDSLDFTRVLSEVVDQNRL
Specific function: Catalyzes the ferrous insertion into protoporphyrin IX
COG id: COG0276
COG function: function code H; Protoheme ferro-lyase (ferrochelatase)
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ferrochelatase family
Homologues:
Organism=Homo sapiens, GI60499025, Length=338, Percent_Identity=25.4437869822485, Blast_Score=91, Evalue=9e-19, Organism=Homo sapiens, GI60499021, Length=333, Percent_Identity=26.1261261261261, Blast_Score=91, Evalue=1e-18, Organism=Escherichia coli, GI1786681, Length=317, Percent_Identity=36.5930599369085, Blast_Score=220, Evalue=7e-59, Organism=Saccharomyces cerevisiae, GI6324750, Length=314, Percent_Identity=24.8407643312102, Blast_Score=69, Evalue=1e-12, Organism=Drosophila melanogaster, GI17864156, Length=335, Percent_Identity=27.4626865671642, Blast_Score=86, Evalue=5e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): HEMH_LACLA (Q9CFB4)
Other databases:
- EMBL: AE005176 - PIR: G86820 - RefSeq: NP_267723.1 - ProteinModelPortal: Q9CFB4 - SMR: Q9CFB4 - GeneID: 1115227 - GenomeReviews: AE005176_GR - KEGG: lla:L0194 - NMPDR: fig|272623.1.peg.1609 - HOGENOM: HBG697135 - OMA: TIEEIGM - ProtClustDB: CLSK697807 - BioCyc: LLAC272623:L0194-MONOMER - BRENDA: 4.99.1.1 - GO: GO:0005737 - HAMAP: MF_00323 - InterPro: IPR001015 - PANTHER: PTHR11108 - TIGRFAMs: TIGR00109
Pfam domain/function: PF00762 Ferrochelatase
EC number: =4.99.1.1
Molecular weight: Translated: 36436; Mature: 36436
Theoretical pI: Translated: 4.80; Mature: 4.80
Prosite motif: PS00534 FERROCHELATASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDKKKGILLVALGTPRSCEADDVRDYLKEFLGDPLVIQKPRWLWLPILNGIILKVRPQKS CCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCEEEECCCEEEHHHHCCEEEEECCCHH AEMYKKIWTDEGSPLMIYTVAQAKQLQDMREDFDVRFAMTYGEPRIDKVIAEMKESGVEE HHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHCCCCE ITVLPLYPQYSLTTVEPVIQQVKKIDDKIKVIRDFHKVESYSDLLAESIREKWQANDYDK EEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH LVLSYHGIPLSYVTKKKDAYEEQCKETTRLVVSKLGLREEEYEHTYQSKFGPEKWLEPAT HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHCCCCHH IDRVAELPKENAKKVLICSPAFVADCLETLFELEIENKEVFVENGGETFDFVHPFNDSLD HHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHEECCCCEEEEECCCCEEEEECCCCCCHH FTRVLSEVVDQNRL HHHHHHHHHHCCCC >Mature Secondary Structure MDKKKGILLVALGTPRSCEADDVRDYLKEFLGDPLVIQKPRWLWLPILNGIILKVRPQKS CCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCEEEECCCEEEHHHHCCEEEEECCCHH AEMYKKIWTDEGSPLMIYTVAQAKQLQDMREDFDVRFAMTYGEPRIDKVIAEMKESGVEE HHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHCCCCE ITVLPLYPQYSLTTVEPVIQQVKKIDDKIKVIRDFHKVESYSDLLAESIREKWQANDYDK EEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH LVLSYHGIPLSYVTKKKDAYEEQCKETTRLVVSKLGLREEEYEHTYQSKFGPEKWLEPAT HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHCCCCHH IDRVAELPKENAKKVLICSPAFVADCLETLFELEIENKEVFVENGGETFDFVHPFNDSLD HHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHEECCCCEEEEECCCCEEEEECCCCCCHH FTRVLSEVVDQNRL HHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11337471