Definition | Lactococcus lactis subsp. lactis Il1403, complete genome. |
---|---|
Accession | NC_002662 |
Length | 2,365,589 |
Click here to switch to the map view.
The map label for this gene is pi345
Identifier: 15673400
GI number: 15673400
Start: 1447273
End: 1447647
Strand: Reverse
Name: pi345
Synonym: L47020
Alternate gene names: NA
Gene position: 1447647-1447273 (Counterclockwise)
Preceding gene: 30024043
Following gene: 15673399
Centisome position: 61.2
GC content: 32.0
Gene sequence:
>375_bases ATGAAGTTTCAGCAAACTAAAAAGTCAAAATATGGAGCAAAGAAAACAACGGTAGATGGCATTGTATTTGATAGCAAAGC TGAATCAATCTACTATTTGCAACATAAAAATGATGAGCGGATGACCATGCAAGAGAAGTTTGTTCTTATGGATAAATTTA GATTGAACGGAAAACTTTATAGAGAAATAGCTTATAAAGCGGACTTTGTTTTCAGAAATGAAGCTAATGAGATTATCAAA GTTGTCGATGTAAAAGGCATGGTCCTACCTGAATTTAAAATGAAAGCAAAATTATTTGCTAACAGATATGGAATTCCAAT AACAATTGCTAAGAAAGTAGCAAGAATAAATATGTTCGAGGAGAGCGAAATATGA
Upstream 100 bases:
>100_bases ATTAAAAAGCAGAAGCTGGCAGAGAAAACTGAGCATGAGATTCTTTTTATACTTAATCGCATGGCTCAGATGCCTGCAAT TGCTAGATTTGGAGAAGTAA
Downstream 100 bases:
>100_bases TTAAAACCGAACACGACAATGTTTTTGCTTTATATTGCCAAGACAAAAAAATAGTAACAAACGGAAAGTTATTACGAGTT GAGTTAGGGTTCCCTTATCA
Product: prophage pi3 protein 45
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 124; Mature: 124
Protein sequence:
>124_residues MKFQQTKKSKYGAKKTTVDGIVFDSKAESIYYLQHKNDERMTMQEKFVLMDKFRLNGKLYREIAYKADFVFRNEANEIIK VVDVKGMVLPEFKMKAKLFANRYGIPITIAKKVARINMFEESEI
Sequences:
>Translated_124_residues MKFQQTKKSKYGAKKTTVDGIVFDSKAESIYYLQHKNDERMTMQEKFVLMDKFRLNGKLYREIAYKADFVFRNEANEIIK VVDVKGMVLPEFKMKAKLFANRYGIPITIAKKVARINMFEESEI >Mature_124_residues MKFQQTKKSKYGAKKTTVDGIVFDSKAESIYYLQHKNDERMTMQEKFVLMDKFRLNGKLYREIAYKADFVFRNEANEIIK VVDVKGMVLPEFKMKAKLFANRYGIPITIAKKVARINMFEESEI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14604; Mature: 14604
Theoretical pI: Translated: 10.28; Mature: 10.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.6 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.6 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFQQTKKSKYGAKKTTVDGIVFDSKAESIYYLQHKNDERMTMQEKFVLMDKFRLNGKLY CCCCCCCHHHCCCCCCEECEEEECCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCHHH REIAYKADFVFRNEANEIIKVVDVKGMVLPEFKMKAKLFANRYGIPITIAKKVARINMFE HHHHHHHCEEEECCCCCEEEEEECCCEECCCHHHHHHHHHCCCCCCCHHHHHHHHHCCCC ESEI CCCC >Mature Secondary Structure MKFQQTKKSKYGAKKTTVDGIVFDSKAESIYYLQHKNDERMTMQEKFVLMDKFRLNGKLY CCCCCCCHHHCCCCCCEECEEEECCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCHHH REIAYKADFVFRNEANEIIKVVDVKGMVLPEFKMKAKLFANRYGIPITIAKKVARINMFE HHHHHHHCEEEECCCCCEEEEEECCCEECCCHHHHHHHHHCCCCCCCHHHHHHHHHCCCC ESEI CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA