Definition | Lactococcus lactis subsp. lactis Il1403, complete genome. |
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Accession | NC_002662 |
Length | 2,365,589 |
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The map label for this gene is pi330
Identifier: 15673385
GI number: 15673385
Start: 1440787
End: 1441209
Strand: Reverse
Name: pi330
Synonym: L40534
Alternate gene names: NA
Gene position: 1441209-1440787 (Counterclockwise)
Preceding gene: 15673386
Following gene: 15673384
Centisome position: 60.92
GC content: 33.1
Gene sequence:
>423_bases ATGGCAGATAAGTTAGATAGAATTATTGGAGATTACGTTAATGGCAGACTTGAAGCCAGAATAAAATCAATTGAAAGTAG ATATCTTTATAAGCAAAAAGTAGATAACTTAGGCAATCGTACAGCTTATTCTGGTGGTTCGGAACAGTTAAGTCATGTTT TAAATAAAGAAGCGCTTGAAAATGATGAGGAATACATCAAGCTCAAAGACCTGATGTACCAATTCAGCTTGTGGTACGAA CCTTTAATTAAGGAGGAAAAAGAAATAATCAAGCTAAAACACTGTGGTTACGGTGGTTTTACATGGTACAGAGTAATGAT GGAACTTGATAATGAAGGGATTGAGATTTCAGAAAAGAAAGCTAAGTTTATTTATTATCGATTCAGAAAAGATATAAACC CTCATATTGGCTATTTCATTTGA
Upstream 100 bases:
>100_bases ATGAAACTGAGATAGTTAAATAAACAAAAAAAGCGCACTGCAATGCGCTTCGGCAACTGAATTTCTAACTTAATTATACC ACAAAAGGAGAATTTGATGA
Downstream 100 bases:
>100_bases AAGCATGGGTCAAATTGGGATAAAAACGACACGAAAAAGGCACGAAATTGGAGTGTTGCTCCTTATTTTTGCTGATATAC TTGTATTATGAAGTAAAAGG
Product: prophage pi3 protein 30
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 140; Mature: 139
Protein sequence:
>140_residues MADKLDRIIGDYVNGRLEARIKSIESRYLYKQKVDNLGNRTAYSGGSEQLSHVLNKEALENDEEYIKLKDLMYQFSLWYE PLIKEEKEIIKLKHCGYGGFTWYRVMMELDNEGIEISEKKAKFIYYRFRKDINPHIGYFI
Sequences:
>Translated_140_residues MADKLDRIIGDYVNGRLEARIKSIESRYLYKQKVDNLGNRTAYSGGSEQLSHVLNKEALENDEEYIKLKDLMYQFSLWYE PLIKEEKEIIKLKHCGYGGFTWYRVMMELDNEGIEISEKKAKFIYYRFRKDINPHIGYFI >Mature_139_residues ADKLDRIIGDYVNGRLEARIKSIESRYLYKQKVDNLGNRTAYSGGSEQLSHVLNKEALENDEEYIKLKDLMYQFSLWYEP LIKEEKEIIKLKHCGYGGFTWYRVMMELDNEGIEISEKKAKFIYYRFRKDINPHIGYFI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16720; Mature: 16589
Theoretical pI: Translated: 7.58; Mature: 7.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADKLDRIIGDYVNGRLEARIKSIESRYLYKQKVDNLGNRTAYSGGSEQLSHVLNKEALE CCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHC NDEEYIKLKDLMYQFSLWYEPLIKEEKEIIKLKHCGYGGFTWYRVMMELDNEGIEISEKK CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCEECCHH AKFIYYRFRKDINPHIGYFI HHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure ADKLDRIIGDYVNGRLEARIKSIESRYLYKQKVDNLGNRTAYSGGSEQLSHVLNKEALE CHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHC NDEEYIKLKDLMYQFSLWYEPLIKEEKEIIKLKHCGYGGFTWYRVMMELDNEGIEISEKK CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCEECCHH AKFIYYRFRKDINPHIGYFI HHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA