Definition | Lactococcus lactis subsp. lactis Il1403, complete genome. |
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Accession | NC_002662 |
Length | 2,365,589 |
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The map label for this gene is pi326
Identifier: 15673381
GI number: 15673381
Start: 1437255
End: 1439228
Strand: Reverse
Name: pi326
Synonym: L37002
Alternate gene names: NA
Gene position: 1439228-1437255 (Counterclockwise)
Preceding gene: 15673382
Following gene: 15673380
Centisome position: 60.84
GC content: 33.74
Gene sequence:
>1974_bases ATGATGATTACTGAGTTAGCTCCTACAAAAACAATGAATAATCTTATCATTGAATTTAAAGTTGATTTAACGCAGGACCA CGACGTCTTAGGAGCTTATCATAGTATTGATTTTTCAGAAATACGTGCTAAATATAGAGACCCTGGCACAAGATATGCAT TCGCAGTATTAGACGGTATAACAAAATCTGGGTATCTAACAAAATTAGCAGCATTTAGGCATTTAAGAGACCTTCAAAGA ATTGGACGCGAAGATTTTCCTTATAGATACTCTAAAAAGGAAATAAAAAATTTACTAAAAGTTGCTTCAGTTGTCCCGAA TGTTGATACAGGCGAACCAACTGAGCTAATGCCTTGGCAAAAATTCATTATGTGTATGCTGATAGGCTGGAGGAATAGCG AAGGTGGAAAAAGGTTTACCGTCGCTATAATATCAGTATCTCGTGGGCAAGGTAAAACTTATATTCTAGCAATTTTGATG GTTTATTCATTTTTATTTGAAAGTCTTGGTTTATCAAATCAGGACTTTTTAGTTTCCTCGATAAACTTTAAACAGACAAG CAAATTGTTTGGATATGTTAAGACGATGCTTAAGACAGTTATAAAAATTGAACCATTTAAAACAATTGCTGCTGAAACAG GTTTGACTGATCGTTCTATTCTGAATGATGAAGTTGTCATGAAGAAAATGAATAATAAAATTCGTGCTATTTCTCATGAA GCTGGTCAATATGATAGTTTTCACTTTACAACTGCTATTTTTGATGAAATCGGAGAGGTAACTAATAGAGAAAAAATTTC TAAAATTGTTTCTGGGCAAGTTATGGTTGAAAATCATCAGTTTGTACAAATTTCAACTTCCTATCCAGACCCTAGCGTTC CTTTTAGAAAAGACCAAAAAACACTTCAAGAAGCTATGGAAAAAGATTGGGATAGAGAAGCAGATACTTCTTTGTGTTTG GTATGGGCGCAAGATGATTTATCAGAAACATTCGAGCCAGAAACTTGGGTAAAATCAAACCCTCTTCTTGAATTGGAAGA TAAAAAAGATATTTTATTAAAAGGATTGATTGACAAACGAAACAGTGACTTGTTACAAGGGACACTACATGATTTTCAAA CTAAAAACCTTAATATGTGGCTTCAGCAAGATGTTGATAGTTACTTAAATCTTGCTGATGTTGAAAAAGCTATTATTCCT GAATTTAGCATTCATGGGCAACGCTGTTATATAGGTATTGACTATTCAATGATGTCAGATAATACAGCGATTGCTTTCGT TTTTCCTTATTTAGATGATGAAGGAAAGCCTAAGTGGCATGTTGAACAGCATTCGTTTGTTCCATTCCAAAGAGCAGGTT CAATTGATGCTAAAGAAAAACAAGATGGTATTAATTATAGAGAACTAGAAAAATATGGTTTTTGTACAGTCACAAGCCAC CAACAAGGGCTAATCAATGATGATGAGGTCTATGAATGGATTGTAAACTATATTGAAGATAACGCATTGGATGTTATCTT TTTTGGTTACGATGCAATGGGTATCACTAAAGTAATTCAAATGCTCATGAATAATACGGGCTATAATTTACAACCTATCC GTCAAAGAACGAGTGAGTTGAAAGATCCTACAAAATTTTTACAAAAACTATTTGTAGAGGGATCTATTAGTAGGCTAGAT GATAAAATCATGGAAAAATCGCTATTAAATGCGGTTTTACGTGAAGATTCAATAGGAATACAGGTAGATAAACGAAAAGC AACTTTAAAAATTGACGTTGTTGATGCGATTATTGATGCTTTATTTCAAGGGATGTATCACTTTGAGGATTATGGTATGG CAAATGATAAGAGTTGGAAAGTTGAGCATATGACACCAGAACAAGTAAAAGAATGGGTTACTAGCCAAGAATCTGGCTTA TTAGACCTTGATGACGGAATAGATGATGATTGGGGATTCGATGAAGATTTTTAA
Upstream 100 bases:
>100_bases TTATCGCCAAAATCACGTTCTGAATTGATAGAGCTTAACATGCAAGATACGAATGAAAAAAGCACTAAAGATAAGATGAA GGCATTCTTTGATGGAGGTG
Downstream 100 bases:
>100_bases AAACTTATTTTCTTTAATTTGGAAAATATTTGATGTACTTATGTTTATTGCTTTTGCAGTAACCATAACAGTAACAATGT TTATGTGGAATATAACAGCT
Product: terminase large subunit
Products: NA
Alternate protein names: Terminase Large Subunit; Terminase; Phage Terminase; Phage Terminase-Like Protein Large Subunit; Phage-Related Terminase Large Subunit; Prophage; Bacteriophage Terminase Large Subunit; Prophage Terminase Large Subunit; Prophage Lp3 Terminase Large Subunit; Prophage LambdaSa; Phage-Terminase Large Subunit; Phage Terminase-Like Protein; Phage Large Terminase Subunit; Phage Related Terminase Large Sub-Unit; Terminase-Large Subunit; Phage-Related Terminase
Number of amino acids: Translated: 657; Mature: 657
Protein sequence:
>657_residues MMITELAPTKTMNNLIIEFKVDLTQDHDVLGAYHSIDFSEIRAKYRDPGTRYAFAVLDGITKSGYLTKLAAFRHLRDLQR IGREDFPYRYSKKEIKNLLKVASVVPNVDTGEPTELMPWQKFIMCMLIGWRNSEGGKRFTVAIISVSRGQGKTYILAILM VYSFLFESLGLSNQDFLVSSINFKQTSKLFGYVKTMLKTVIKIEPFKTIAAETGLTDRSILNDEVVMKKMNNKIRAISHE AGQYDSFHFTTAIFDEIGEVTNREKISKIVSGQVMVENHQFVQISTSYPDPSVPFRKDQKTLQEAMEKDWDREADTSLCL VWAQDDLSETFEPETWVKSNPLLELEDKKDILLKGLIDKRNSDLLQGTLHDFQTKNLNMWLQQDVDSYLNLADVEKAIIP EFSIHGQRCYIGIDYSMMSDNTAIAFVFPYLDDEGKPKWHVEQHSFVPFQRAGSIDAKEKQDGINYRELEKYGFCTVTSH QQGLINDDEVYEWIVNYIEDNALDVIFFGYDAMGITKVIQMLMNNTGYNLQPIRQRTSELKDPTKFLQKLFVEGSISRLD DKIMEKSLLNAVLREDSIGIQVDKRKATLKIDVVDAIIDALFQGMYHFEDYGMANDKSWKVEHMTPEQVKEWVTSQESGL LDLDDGIDDDWGFDEDF
Sequences:
>Translated_657_residues MMITELAPTKTMNNLIIEFKVDLTQDHDVLGAYHSIDFSEIRAKYRDPGTRYAFAVLDGITKSGYLTKLAAFRHLRDLQR IGREDFPYRYSKKEIKNLLKVASVVPNVDTGEPTELMPWQKFIMCMLIGWRNSEGGKRFTVAIISVSRGQGKTYILAILM VYSFLFESLGLSNQDFLVSSINFKQTSKLFGYVKTMLKTVIKIEPFKTIAAETGLTDRSILNDEVVMKKMNNKIRAISHE AGQYDSFHFTTAIFDEIGEVTNREKISKIVSGQVMVENHQFVQISTSYPDPSVPFRKDQKTLQEAMEKDWDREADTSLCL VWAQDDLSETFEPETWVKSNPLLELEDKKDILLKGLIDKRNSDLLQGTLHDFQTKNLNMWLQQDVDSYLNLADVEKAIIP EFSIHGQRCYIGIDYSMMSDNTAIAFVFPYLDDEGKPKWHVEQHSFVPFQRAGSIDAKEKQDGINYRELEKYGFCTVTSH QQGLINDDEVYEWIVNYIEDNALDVIFFGYDAMGITKVIQMLMNNTGYNLQPIRQRTSELKDPTKFLQKLFVEGSISRLD DKIMEKSLLNAVLREDSIGIQVDKRKATLKIDVVDAIIDALFQGMYHFEDYGMANDKSWKVEHMTPEQVKEWVTSQESGL LDLDDGIDDDWGFDEDF >Mature_657_residues MMITELAPTKTMNNLIIEFKVDLTQDHDVLGAYHSIDFSEIRAKYRDPGTRYAFAVLDGITKSGYLTKLAAFRHLRDLQR IGREDFPYRYSKKEIKNLLKVASVVPNVDTGEPTELMPWQKFIMCMLIGWRNSEGGKRFTVAIISVSRGQGKTYILAILM VYSFLFESLGLSNQDFLVSSINFKQTSKLFGYVKTMLKTVIKIEPFKTIAAETGLTDRSILNDEVVMKKMNNKIRAISHE AGQYDSFHFTTAIFDEIGEVTNREKISKIVSGQVMVENHQFVQISTSYPDPSVPFRKDQKTLQEAMEKDWDREADTSLCL VWAQDDLSETFEPETWVKSNPLLELEDKKDILLKGLIDKRNSDLLQGTLHDFQTKNLNMWLQQDVDSYLNLADVEKAIIP EFSIHGQRCYIGIDYSMMSDNTAIAFVFPYLDDEGKPKWHVEQHSFVPFQRAGSIDAKEKQDGINYRELEKYGFCTVTSH QQGLINDDEVYEWIVNYIEDNALDVIFFGYDAMGITKVIQMLMNNTGYNLQPIRQRTSELKDPTKFLQKLFVEGSISRLD DKIMEKSLLNAVLREDSIGIQVDKRKATLKIDVVDAIIDALFQGMYHFEDYGMANDKSWKVEHMTPEQVKEWVTSQESGL LDLDDGIDDDWGFDEDF
Specific function: Unknown
COG id: COG4626
COG function: function code R; Phage terminase-like protein, large subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 75570; Mature: 75570
Theoretical pI: Translated: 4.76; Mature: 4.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMITELAPTKTMNNLIIEFKVDLTQDHDVLGAYHSIDFSEIRAKYRDPGTRYAFAVLDGI CCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHCCCHHHHHHHHCCCCCEEEHHHHHCC TKSGYLTKLAAFRHLRDLQRIGREDFPYRYSKKEIKNLLKVASVVPNVDTGEPTELMPWQ CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHH KFIMCMLIGWRNSEGGKRFTVAIISVSRGQGKTYILAILMVYSFLFESLGLSNQDFLVSS HHHHHHHHCCCCCCCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEE INFKQTSKLFGYVKTMLKTVIKIEPFKTIAAETGLTDRSILNDEVVMKKMNNKIRAISHE CCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHCCHHEEHCCC AGQYDSFHFTTAIFDEIGEVTNREKISKIVSGQVMVENHQFVQISTSYPDPSVPFRKDQK CCCCCCEEHHHHHHHHHHHHHCHHHHHHHHCCEEEEECCEEEEEECCCCCCCCCCCCHHH TLQEAMEKDWDREADTSLCLVWAQDDLSETFEPETWVKSNPLLELEDKKDILLKGLIDKR HHHHHHHHCCCCCCCCCEEEEEECCCHHHCCCCCCCCCCCCCEEECCCHHHHHHHHHCCC NSDLLQGTLHDFQTKNLNMWLQQDVDSYLNLADVEKAIIPEFSIHGQRCYIGIDYSMMSD CCHHHHHHHHHHCCCCCHHHHHHHHHHHHCHHHHHHHHCCCCCCCCCEEEEEEEHEEECC NTAIAFVFPYLDDEGKPKWHVEQHSFVPFQRAGSIDAKEKQDGINYRELEKYGFCTVTSH CCEEEEEEEEECCCCCCCEEECCCCCCCHHHCCCCCCHHHHCCCCHHHHHHCCCEEEECC QQGLINDDEVYEWIVNYIEDNALDVIFFGYDAMGITKVIQMLMNNTGYNLQPIRQRTSEL CCCCCCHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHC KDPTKFLQKLFVEGSISRLDDKIMEKSLLNAVLREDSIGIQVDKRKATLKIDVVDAIIDA CCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCEEEEEHHHHHHHHH LFQGMYHFEDYGMANDKSWKVEHMTPEQVKEWVTSQESGLLDLDDGIDDDWGFDEDF HHHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHHCCCCCCEECCCCCCCCCCCCCCC >Mature Secondary Structure MMITELAPTKTMNNLIIEFKVDLTQDHDVLGAYHSIDFSEIRAKYRDPGTRYAFAVLDGI CCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHCCCHHHHHHHHCCCCCEEEHHHHHCC TKSGYLTKLAAFRHLRDLQRIGREDFPYRYSKKEIKNLLKVASVVPNVDTGEPTELMPWQ CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHH KFIMCMLIGWRNSEGGKRFTVAIISVSRGQGKTYILAILMVYSFLFESLGLSNQDFLVSS HHHHHHHHCCCCCCCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEE INFKQTSKLFGYVKTMLKTVIKIEPFKTIAAETGLTDRSILNDEVVMKKMNNKIRAISHE CCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHCCHHEEHCCC AGQYDSFHFTTAIFDEIGEVTNREKISKIVSGQVMVENHQFVQISTSYPDPSVPFRKDQK CCCCCCEEHHHHHHHHHHHHHCHHHHHHHHCCEEEEECCEEEEEECCCCCCCCCCCCHHH TLQEAMEKDWDREADTSLCLVWAQDDLSETFEPETWVKSNPLLELEDKKDILLKGLIDKR HHHHHHHHCCCCCCCCCEEEEEECCCHHHCCCCCCCCCCCCCEEECCCHHHHHHHHHCCC NSDLLQGTLHDFQTKNLNMWLQQDVDSYLNLADVEKAIIPEFSIHGQRCYIGIDYSMMSD CCHHHHHHHHHHCCCCCHHHHHHHHHHHHCHHHHHHHHCCCCCCCCCEEEEEEEHEEECC NTAIAFVFPYLDDEGKPKWHVEQHSFVPFQRAGSIDAKEKQDGINYRELEKYGFCTVTSH CCEEEEEEEEECCCCCCCEEECCCCCCCHHHCCCCCCHHHHCCCCHHHHHHCCCEEEECC QQGLINDDEVYEWIVNYIEDNALDVIFFGYDAMGITKVIQMLMNNTGYNLQPIRQRTSEL CCCCCCHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHC KDPTKFLQKLFVEGSISRLDDKIMEKSLLNAVLREDSIGIQVDKRKATLKIDVVDAIIDA CCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCEEEEEHHHHHHHHH LFQGMYHFEDYGMANDKSWKVEHMTPEQVKEWVTSQESGLLDLDDGIDDDWGFDEDF HHHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHHCCCCCCEECCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA