Definition | Lactococcus lactis subsp. lactis Il1403, complete genome. |
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Accession | NC_002662 |
Length | 2,365,589 |
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The map label for this gene is ynjI
Identifier: 15673343
GI number: 15673343
Start: 1397062
End: 1397496
Strand: Reverse
Name: ynjI
Synonym: L196808
Alternate gene names: NA
Gene position: 1397496-1397062 (Counterclockwise)
Preceding gene: 15673344
Following gene: 15673342
Centisome position: 59.08
GC content: 37.47
Gene sequence:
>435_bases ATGAAAATAAAAAGATTTATTCTTCTCATGACTTTAGGATTTTTAATTATCCTATTTGGTTTAGCTCCCAAGGCTAGAGC TGCTATTGTAGGTGGAACAGTTGATACGACAGGAACAGTGACAGGCATAACAGGAGCAACCTACTATAATGTGAGCAATT GGCAAGATATGATTGATACTTATAAAGGAGTGACACCAAATGCAGCCTCAAGCAATACTGTTTTTCTTAATGTAACGGCA AATGTTCCCGGAAATAGTATTTTGAACTCTGGCAACACCGTTTCTAGTGGTAAATCTTTATCAATAAATGGAAATAATTA TACGCTCTATCTTGATAATGACACGAATTATACAACGGCTCAGGTATTGGTGGAAGTGATGGAACAGCCAGAGCTTTCGG CTCTAATGGAACGATTTCTACGGATACGACTCTAA
Upstream 100 bases:
>100_bases GCAACTAACAGTAGATGGAACAACTAGAGTAATTGTTACAGGTTCTTATAAAGCAACGATTACCTCAACACTTGTAACAG GACCATAGAAGGGATAAAAG
Downstream 100 bases:
>100_bases CAGTTAAGAATGCAACAATTGTAAACAATATCACGAGTGGAATTTTTCAAATGAAAGGTTTAAATGCTAAGGCTACGGCT GTATATGAAAATGTGACGGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 144; Mature: 144
Protein sequence:
>144_residues MKIKRFILLMTLGFLIILFGLAPKARAAIVGGTVDTTGTVTGITGATYYNVSNWQDMIDTYKGVTPNAASSNTVFLNVTA NVPGNSILNSGNTVSSGKSLSINGNNYTLYLDNDTNYTTAQVLVEVMEQPELSALMERFLRIRL
Sequences:
>Translated_144_residues MKIKRFILLMTLGFLIILFGLAPKARAAIVGGTVDTTGTVTGITGATYYNVSNWQDMIDTYKGVTPNAASSNTVFLNVTA NVPGNSILNSGNTVSSGKSLSINGNNYTLYLDNDTNYTTAQVLVEVMEQPELSALMERFLRIRL >Mature_144_residues MKIKRFILLMTLGFLIILFGLAPKARAAIVGGTVDTTGTVTGITGATYYNVSNWQDMIDTYKGVTPNAASSNTVFLNVTA NVPGNSILNSGNTVSSGKSLSINGNNYTLYLDNDTNYTTAQVLVEVMEQPELSALMERFLRIRL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15576; Mature: 15576
Theoretical pI: Translated: 8.84; Mature: 8.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIKRFILLMTLGFLIILFGLAPKARAAIVGGTVDTTGTVTGITGATYYNVSNWQDMIDT CCHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCEEECCCCEEEEECCCHHHHHHH YKGVTPNAASSNTVFLNVTANVPGNSILNSGNTVSSGKSLSINGNNYTLYLDNDTNYTTA HCCCCCCCCCCCEEEEEEEECCCCCHHCCCCCCCCCCCEEEEECCEEEEEEECCCCCHHH QVLVEVMEQPELSALMERFLRIRL HHHHHHHCCCCHHHHHHHHHHHCC >Mature Secondary Structure MKIKRFILLMTLGFLIILFGLAPKARAAIVGGTVDTTGTVTGITGATYYNVSNWQDMIDT CCHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCEEECCCCEEEEECCCHHHHHHH YKGVTPNAASSNTVFLNVTANVPGNSILNSGNTVSSGKSLSINGNNYTLYLDNDTNYTTA HCCCCCCCCCCCEEEEEEEECCCCCHHCCCCCCCCCCCEEEEECCEEEEEEECCCCCHHH QVLVEVMEQPELSALMERFLRIRL HHHHHHHCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA