Definition | Lactococcus lactis subsp. lactis Il1403, complete genome. |
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Accession | NC_002662 |
Length | 2,365,589 |
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The map label for this gene is ynjD
Identifier: 15673337
GI number: 15673337
Start: 1392252
End: 1393064
Strand: Reverse
Name: ynjD
Synonym: L191998
Alternate gene names: NA
Gene position: 1393064-1392252 (Counterclockwise)
Preceding gene: 15673338
Following gene: 15673336
Centisome position: 58.89
GC content: 41.7
Gene sequence:
>813_bases ATGAAAAAAACAATACTCAGCCTTAGTGGAGTCGCAGTAATTACAGCAACACTTTTGTCAACAAGTGTTTTAGAAGTCAG TGCCGCATCAGTGGGAAGCACGACGAGTGGAGCTAATGTGGCTTTTCAACCTAAGAAAACGCCAACCAATCCGGTATCAC CTGGCGATGGTAAAACGCCAATTAGTCCAACTACGCCAGGAGTTCCTAATACTTCAAATCCTGTTGCTTCAGATGATGGA TTGACTTTGGATTATGTACCAGCCATTAACTTTGGTACTCACTATGTAGATGCTTCAACAGCTCATACTTGGTCAGCTTG GGCTGCAAATGATGGAAGTGGTAAAGCTATTCCGCAATTCTTGCAAGTAACAGATAACCGAGGAACAGCGACTGGTCCAA CAGGATGGTCAGTTTCTTTGACGCAAACAGCTCAATTTAAAGGAACGAAAGCTGGTGATTTAGTCAATGCTGTTATGACT TTTAACAATGATAAAACTAATACGGTTGTTAGTACATCAATGAATAAAGCAAGTTCAACCGTGAATACGGCAACGAATGC TCTTGTTCCAGGAACGGCAGTAAATATTTTCCAAGCAGATGCAGGGACAGGGACAGGAACAAACTTGCTTAGTTTTGGTG CGGGAGATGGTTCTACTTTGGTAACCGACCCAGAAACTTTGGATTCTGCAACGAATACAACAGGTAAGGTAGATCCAAAT ATTACTCTTAATGTACCAGCAGGATCTGCCAAAGTGGATACCTATACTACAACTTTAAACTGGAATCTTTATAGTGCACC AGGTAATGCATAA
Upstream 100 bases:
>100_bases AATGATTCTTTAATGCCTTTTGTGGTAGGATTAGTGACAATTGGAGTTGGAAGTCTAATGATTAAAAAGACCAAACGAAT AAGGATAAAGGAGAACTTTA
Downstream 100 bases:
>100_bases TAGTTGATTCGAGCAACTGAGTCTCTCAAAAGGGAGACTCACCTTTTATAAAAAATTGGGGATTATGGGGGTTATAAATG AAAAAATTACAATTATTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 270; Mature: 270
Protein sequence:
>270_residues MKKTILSLSGVAVITATLLSTSVLEVSAASVGSTTSGANVAFQPKKTPTNPVSPGDGKTPISPTTPGVPNTSNPVASDDG LTLDYVPAINFGTHYVDASTAHTWSAWAANDGSGKAIPQFLQVTDNRGTATGPTGWSVSLTQTAQFKGTKAGDLVNAVMT FNNDKTNTVVSTSMNKASSTVNTATNALVPGTAVNIFQADAGTGTGTNLLSFGAGDGSTLVTDPETLDSATNTTGKVDPN ITLNVPAGSAKVDTYTTTLNWNLYSAPGNA
Sequences:
>Translated_270_residues MKKTILSLSGVAVITATLLSTSVLEVSAASVGSTTSGANVAFQPKKTPTNPVSPGDGKTPISPTTPGVPNTSNPVASDDG LTLDYVPAINFGTHYVDASTAHTWSAWAANDGSGKAIPQFLQVTDNRGTATGPTGWSVSLTQTAQFKGTKAGDLVNAVMT FNNDKTNTVVSTSMNKASSTVNTATNALVPGTAVNIFQADAGTGTGTNLLSFGAGDGSTLVTDPETLDSATNTTGKVDPN ITLNVPAGSAKVDTYTTTLNWNLYSAPGNA >Mature_270_residues MKKTILSLSGVAVITATLLSTSVLEVSAASVGSTTSGANVAFQPKKTPTNPVSPGDGKTPISPTTPGVPNTSNPVASDDG LTLDYVPAINFGTHYVDASTAHTWSAWAANDGSGKAIPQFLQVTDNRGTATGPTGWSVSLTQTAQFKGTKAGDLVNAVMT FNNDKTNTVVSTSMNKASSTVNTATNALVPGTAVNIFQADAGTGTGTNLLSFGAGDGSTLVTDPETLDSATNTTGKVDPN ITLNVPAGSAKVDTYTTTLNWNLYSAPGNA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27303; Mature: 27303
Theoretical pI: Translated: 4.81; Mature: 4.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKTILSLSGVAVITATLLSTSVLEVSAASVGSTTSGANVAFQPKKTPTNPVSPGDGKTP CCCEEEECCCHHHHHHHHHHHHHHEEEHHCCCCCCCCCEEEECCCCCCCCCCCCCCCCCC ISPTTPGVPNTSNPVASDDGLTLDYVPAINFGTHYVDASTAHTWSAWAANDGSGKAIPQF CCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEECCCCCEEEEEECCCCCCCCCHHH LQVTDNRGTATGPTGWSVSLTQTAQFKGTKAGDLVNAVMTFNNDKTNTVVSTSMNKASST HEEECCCCCCCCCCCCEEEEEEEEECCCCCHHHHEEEEEEECCCCCCEEEEECCCCHHHH VNTATNALVPGTAVNIFQADAGTGTGTNLLSFGAGDGSTLVTDPETLDSATNTTGKVDPN HHHHHCEECCCCEEEEEEECCCCCCCCCEEEECCCCCCEEEECHHHHCCCCCCCCCCCCC ITLNVPAGSAKVDTYTTTLNWNLYSAPGNA EEEEECCCCCEEEEEEEEEEEEEECCCCCC >Mature Secondary Structure MKKTILSLSGVAVITATLLSTSVLEVSAASVGSTTSGANVAFQPKKTPTNPVSPGDGKTP CCCEEEECCCHHHHHHHHHHHHHHEEEHHCCCCCCCCCEEEECCCCCCCCCCCCCCCCCC ISPTTPGVPNTSNPVASDDGLTLDYVPAINFGTHYVDASTAHTWSAWAANDGSGKAIPQF CCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEECCCCCEEEEEECCCCCCCCCHHH LQVTDNRGTATGPTGWSVSLTQTAQFKGTKAGDLVNAVMTFNNDKTNTVVSTSMNKASST HEEECCCCCCCCCCCCEEEEEEEEECCCCCHHHHEEEEEEECCCCCCEEEEECCCCHHHH VNTATNALVPGTAVNIFQADAGTGTGTNLLSFGAGDGSTLVTDPETLDSATNTTGKVDPN HHHHHCEECCCCEEEEEEECCCCCCCCCEEEECCCCCCEEEECHHHHCCCCCCCCCCCCC ITLNVPAGSAKVDTYTTTLNWNLYSAPGNA EEEEECCCCCEEEEEEEEEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA