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The map label for this gene is yndF

Identifier: 15673283

GI number: 15673283

Start: 1334649

End: 1336610

Strand: Reverse

Name: yndF

Synonym: L134394

Alternate gene names: 15673283

Gene position: 1336610-1334649 (Counterclockwise)

Preceding gene: 15673284

Following gene: 15673282

Centisome position: 56.5

GC content: 33.89

Gene sequence:

>1962_bases
ATGAAAAAGATACATTTAAATAAATGGAAACATAAGACTAGTCTTTATCTTATGCTGTTTTGTTTGTCTTTACCATTGGC
CTTAACGCCCCTAAGTGTCTCGGCAACTGAAAAAGAAACAGAATCTGAACAAACAGCACCAACAAGTCAAAAAGATGCTT
CTGAAACTACATCTGAAACTCAAACGGTGGAATCCTCTACTAATGATCAAAACCAAAATAATTCAACGATTTCCTTACCA
GAAAGTTCTTCTACTACTAGCTTAGCGCCTTCTGAAAGTCTGACTTCTGATTCAAAAAAATTGGCGCAAAAAGAGGAAGT
AGTTGCATCAACAACGGTTGCTGAACCAAAAGCAGCAGCAAGTTCTACAATCTCTGTACCAGACCCAAATTTAAAACAAA
CAATTTTATCAACTTTAGGGCTTGCAACGACTGCTGAACTGACTCAGACAGATATGGATAAATTAACGAATTTAACTTTA
AATTCAGTAGATATTTATAGCCTAGTTGGACTTGAACATGCAACTAATCTTTCATCAATTTATATTAATGTCAATAACAA
AATCACAGACTTTACACCATTAGAATCATTAACCAAACTGACATTTGTTACCCTACAAACTAGTTCATTAACCAGCGATA
ACTTTCCAAATCTTACAGCAAGTCAGGGTTTGACAAATTTGTCAATTGGTGGGACTAGTGTGGATAATTCTGTATTAGCA
AAAATTGTTAATTTAAAAGCTTTAGTAAGACTTTATATGGATAGTAATATGAATATTACAAACATTGAGCCATTAAAAGT
TCTTCCGAATCTAAAGAGTCTTAGTGTTCAATTTTGTGGAATCACAGATTTTACTGTCATCAAAGATTTTCCAATAATGT
CTGACTTGGCAGCATTTGGCCAAAATACTGGAAGAAATGATCCTCCAACTACGGTGACAAGATCGAGCTTGAAATATAAT
GAAGATGAGCAAAGTGTTTATATTCCATTTTCAATGATGCCTAATCGAATGACGAATTTTGATGGTTATATTCCACCTTT
TTCAACTTCAAACTCTGCCAGTAATACTTATTTTGATTTTAATGGAACTCAACTTCCAGCCAGTCGTTTGCAAATAGATG
ACAATGGAATCACTATCAATTCAGTTAGTCCTGAAGAATATCAAGGAATAAAATCTTTTGAGTATAATGCTCGTTTAAAT
AACCCAGCAGGAACGTATGCAGTTCCCGATGGCTATACGTTTTATGCAATATCCTCAGGTACTTATTTACATCAATTTGA
TGTCGTTGATGATGGGGCCCCAGTCACAGTTAAGTATCAAGATGAAAATGGTCAAGAACTAGCACCGTCAGAGCTTTTAA
ATGGCTATGTAGGAGCAACCTATAATTCAAAAGAACTAAGTTTCCAAGGATACTCTTTAATTAAAGTGGATGGTGATGCA
ACCGGTAAATTTACGGATAGTCCTCAAACAGTAACTTATATTTATCAGAAAAATGCTAAGTTACTTGGTCAAGTGACGGT
CAAGTATATAGATACAGATGGTAAGGCACTTTTCGGTGATGTTATTCAGACAGGGAATATTGGTGAAACTTATCATACAG
AAAAGAAAGAACTAACTGGTTATACTTTCAAGAATATAATTGGTAATGCCTCTGGCCAATATACTAATAGCCCTCAAACA
GTAACTTACGTTTATGAGAAAAATGCTAATCCTAATAAACCAGAAGAAGTTATTCCAGATTCTAGTGATAAAAATAATGT
AAATCCAGACTCTAGGGAGAATGAAACAACGAAAGGGTCTAAGACTGTTAAAGATAAAGAATCAGTTGTAACTTCTAAAG
AAAAGAATCTACCTGAAACAGGTGATAAAGAACAAGGAATGAAAAAAATTACTTTGTTTGGTTCTTTCTTACTTATACTT
GGTTCACTTGTGCTATTTATTCGATTTAGAAAAGTAGATTAA

Upstream 100 bases:

>100_bases
AATAGTATTGAAATATATATGTTTTAACAGTTTTGAAATGCATTGACATGAAAACGCTTGTGTGATAAGCTGTAACTTAA
ACATTACACAAGGAGTTATT

Downstream 100 bases:

>100_bases
TTATAACAATTATTTTATAAGAGCTTTGTTTTCTTAGCTCTTTTTTAATTAATATTGATAAAAAAGGAGGGGCAATGGTT
GGAGAAGTTGTTTTAGTCAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 653; Mature: 653

Protein sequence:

>653_residues
MKKIHLNKWKHKTSLYLMLFCLSLPLALTPLSVSATEKETESEQTAPTSQKDASETTSETQTVESSTNDQNQNNSTISLP
ESSSTTSLAPSESLTSDSKKLAQKEEVVASTTVAEPKAAASSTISVPDPNLKQTILSTLGLATTAELTQTDMDKLTNLTL
NSVDIYSLVGLEHATNLSSIYINVNNKITDFTPLESLTKLTFVTLQTSSLTSDNFPNLTASQGLTNLSIGGTSVDNSVLA
KIVNLKALVRLYMDSNMNITNIEPLKVLPNLKSLSVQFCGITDFTVIKDFPIMSDLAAFGQNTGRNDPPTTVTRSSLKYN
EDEQSVYIPFSMMPNRMTNFDGYIPPFSTSNSASNTYFDFNGTQLPASRLQIDDNGITINSVSPEEYQGIKSFEYNARLN
NPAGTYAVPDGYTFYAISSGTYLHQFDVVDDGAPVTVKYQDENGQELAPSELLNGYVGATYNSKELSFQGYSLIKVDGDA
TGKFTDSPQTVTYIYQKNAKLLGQVTVKYIDTDGKALFGDVIQTGNIGETYHTEKKELTGYTFKNIIGNASGQYTNSPQT
VTYVYEKNANPNKPEEVIPDSSDKNNVNPDSRENETTKGSKTVKDKESVVTSKEKNLPETGDKEQGMKKITLFGSFLLIL
GSLVLFIRFRKVD

Sequences:

>Translated_653_residues
MKKIHLNKWKHKTSLYLMLFCLSLPLALTPLSVSATEKETESEQTAPTSQKDASETTSETQTVESSTNDQNQNNSTISLP
ESSSTTSLAPSESLTSDSKKLAQKEEVVASTTVAEPKAAASSTISVPDPNLKQTILSTLGLATTAELTQTDMDKLTNLTL
NSVDIYSLVGLEHATNLSSIYINVNNKITDFTPLESLTKLTFVTLQTSSLTSDNFPNLTASQGLTNLSIGGTSVDNSVLA
KIVNLKALVRLYMDSNMNITNIEPLKVLPNLKSLSVQFCGITDFTVIKDFPIMSDLAAFGQNTGRNDPPTTVTRSSLKYN
EDEQSVYIPFSMMPNRMTNFDGYIPPFSTSNSASNTYFDFNGTQLPASRLQIDDNGITINSVSPEEYQGIKSFEYNARLN
NPAGTYAVPDGYTFYAISSGTYLHQFDVVDDGAPVTVKYQDENGQELAPSELLNGYVGATYNSKELSFQGYSLIKVDGDA
TGKFTDSPQTVTYIYQKNAKLLGQVTVKYIDTDGKALFGDVIQTGNIGETYHTEKKELTGYTFKNIIGNASGQYTNSPQT
VTYVYEKNANPNKPEEVIPDSSDKNNVNPDSRENETTKGSKTVKDKESVVTSKEKNLPETGDKEQGMKKITLFGSFLLIL
GSLVLFIRFRKVD
>Mature_653_residues
MKKIHLNKWKHKTSLYLMLFCLSLPLALTPLSVSATEKETESEQTAPTSQKDASETTSETQTVESSTNDQNQNNSTISLP
ESSSTTSLAPSESLTSDSKKLAQKEEVVASTTVAEPKAAASSTISVPDPNLKQTILSTLGLATTAELTQTDMDKLTNLTL
NSVDIYSLVGLEHATNLSSIYINVNNKITDFTPLESLTKLTFVTLQTSSLTSDNFPNLTASQGLTNLSIGGTSVDNSVLA
KIVNLKALVRLYMDSNMNITNIEPLKVLPNLKSLSVQFCGITDFTVIKDFPIMSDLAAFGQNTGRNDPPTTVTRSSLKYN
EDEQSVYIPFSMMPNRMTNFDGYIPPFSTSNSASNTYFDFNGTQLPASRLQIDDNGITINSVSPEEYQGIKSFEYNARLN
NPAGTYAVPDGYTFYAISSGTYLHQFDVVDDGAPVTVKYQDENGQELAPSELLNGYVGATYNSKELSFQGYSLIKVDGDA
TGKFTDSPQTVTYIYQKNAKLLGQVTVKYIDTDGKALFGDVIQTGNIGETYHTEKKELTGYTFKNIIGNASGQYTNSPQT
VTYVYEKNANPNKPEEVIPDSSDKNNVNPDSRENETTKGSKTVKDKESVVTSKEKNLPETGDKEQGMKKITLFGSFLLIL
GSLVLFIRFRKVD

Specific function: Involved in several steps of L.monocytogenes infection [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Secreted, cell wall; Peptidoglycan-anchor (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 5 MucBP domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009459
- InterPro:   IPR019931
- InterPro:   IPR001899 [H]

Pfam domain/function: PF06458 MucBP [H]

EC number: NA

Molecular weight: Translated: 71428; Mature: 71428

Theoretical pI: Translated: 4.64; Mature: 4.64

Prosite motif: PS50847 GRAM_POS_ANCHORING

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKIHLNKWKHKTSLYLMLFCLSLPLALTPLSVSATEKETESEQTAPTSQKDASETTSET
CCCCCCCCCCHHHHHHHHHHHHHCCHHCCCCCCCCCCCCCCHHHCCCCCCCCCHHHHHHH
QTVESSTNDQNQNNSTISLPESSSTTSLAPSESLTSDSKKLAQKEEVVASTTVAEPKAAA
HHHHCCCCCCCCCCCEEECCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHCCCCCCHHC
SSTISVPDPNLKQTILSTLGLATTAELTQTDMDKLTNLTLNSVDIYSLVGLEHATNLSSI
CCEEECCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCEEEEHHHCCHHCCCCEEE
YINVNNKITDFTPLESLTKLTFVTLQTSSLTSDNFPNLTASQGLTNLSIGGTSVDNSVLA
EEEECCCCCCCCHHHHHHEEEEEEEEECCCCCCCCCCCHHHCCCCEEECCCCCCCHHHHH
KIVNLKALVRLYMDSNMNITNIEPLKVLPNLKSLSVQFCGITDFTVIKDFPIMSDLAAFG
HHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCEEEEECCCCCHHHCCCCHHHHHHHHC
QNTGRNDPPTTVTRSSLKYNEDEQSVYIPFSMMPNRMTNFDGYIPPFSTSNSASNTYFDF
CCCCCCCCCCCEECCCCCCCCCCCEEEEEHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEC
NGTQLPASRLQIDDNGITINSVSPEEYQGIKSFEYNARLNNPAGTYAVPDGYTFYAISSG
CCCCCCHHHEEECCCCEEEECCCHHHHCCCCCEEECCEECCCCCCEECCCCEEEEEEECC
TYLHQFDVVDDGAPVTVKYQDENGQELAPSELLNGYVGATYNSKELSFQGYSLIKVDGDA
CEEEEEEEECCCCCEEEEEECCCCCCCCHHHHHCCCCCCCCCCCEEEECCEEEEEECCCC
TGKFTDSPQTVTYIYQKNAKLLGQVTVKYIDTDGKALFGDVIQTGNIGETYHTEKKELTG
CCCCCCCCCEEEEEEECCCEEEEEEEEEEEECCCCCHHHHHHCCCCCCCCCCCCHHHHCC
YTFKNIIGNASGQYTNSPQTVTYVYEKNANPNKPEEVIPDSSDKNNVNPDSRENETTKGS
CCHHHHHCCCCCCCCCCCCEEEEEEECCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCC
KTVKDKESVVTSKEKNLPETGDKEQGMKKITLFGSFLLILGSLVLFIRFRKVD
CCHHHHHHHHHHHHCCCCCCCCHHHCCEEEHHHHHHHHHHHHHHHHHHEECCC
>Mature Secondary Structure
MKKIHLNKWKHKTSLYLMLFCLSLPLALTPLSVSATEKETESEQTAPTSQKDASETTSET
CCCCCCCCCCHHHHHHHHHHHHHCCHHCCCCCCCCCCCCCCHHHCCCCCCCCCHHHHHHH
QTVESSTNDQNQNNSTISLPESSSTTSLAPSESLTSDSKKLAQKEEVVASTTVAEPKAAA
HHHHCCCCCCCCCCCEEECCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHCCCCCCHHC
SSTISVPDPNLKQTILSTLGLATTAELTQTDMDKLTNLTLNSVDIYSLVGLEHATNLSSI
CCEEECCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCEEEEHHHCCHHCCCCEEE
YINVNNKITDFTPLESLTKLTFVTLQTSSLTSDNFPNLTASQGLTNLSIGGTSVDNSVLA
EEEECCCCCCCCHHHHHHEEEEEEEEECCCCCCCCCCCHHHCCCCEEECCCCCCCHHHHH
KIVNLKALVRLYMDSNMNITNIEPLKVLPNLKSLSVQFCGITDFTVIKDFPIMSDLAAFG
HHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCEEEEECCCCCHHHCCCCHHHHHHHHC
QNTGRNDPPTTVTRSSLKYNEDEQSVYIPFSMMPNRMTNFDGYIPPFSTSNSASNTYFDF
CCCCCCCCCCCEECCCCCCCCCCCEEEEEHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEC
NGTQLPASRLQIDDNGITINSVSPEEYQGIKSFEYNARLNNPAGTYAVPDGYTFYAISSG
CCCCCCHHHEEECCCCEEEECCCHHHHCCCCCEEECCEECCCCCCEECCCCEEEEEEECC
TYLHQFDVVDDGAPVTVKYQDENGQELAPSELLNGYVGATYNSKELSFQGYSLIKVDGDA
CEEEEEEEECCCCCEEEEEECCCCCCCCHHHHHCCCCCCCCCCCEEEECCEEEEEECCCC
TGKFTDSPQTVTYIYQKNAKLLGQVTVKYIDTDGKALFGDVIQTGNIGETYHTEKKELTG
CCCCCCCCCEEEEEEECCCEEEEEEEEEEEECCCCCHHHHHHCCCCCCCCCCCCHHHHCC
YTFKNIIGNASGQYTNSPQTVTYVYEKNANPNKPEEVIPDSSDKNNVNPDSRENETTKGS
CCHHHHHCCCCCCCCCCCCEEEEEEECCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCC
KTVKDKESVVTSKEKNLPETGDKEQGMKKITLFGSFLLILGSLVLFIRFRKVD
CCHHHHHHHHHHHHCCCCCCCCHHHCCEEEHHHHHHHHHHHHHHHHHHEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA