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The map label for this gene is ymiA

Identifier: 15673238

GI number: 15673238

Start: 1285022

End: 1285675

Strand: Reverse

Name: ymiA

Synonym: L84767

Alternate gene names: 15673238

Gene position: 1285675-1285022 (Counterclockwise)

Preceding gene: 15673239

Following gene: 30024031

Centisome position: 54.35

GC content: 32.57

Gene sequence:

>654_bases
ATGAAAACATCAAAAAATGAACAAGACTATCTAAAGGCAATATATAGCCTAAAAAATGAAAATAATGGATCTGTTAGTAT
TAATGCCATTGCTCAAAAATTATCAGTATCATCACCAAGCGCCACTGAAATGATTAAACGATTAGCCAAAAAAGAACTTG
TTATTCATAAACCTTATTATGGGGTATCACTTACAGACTTAGGAAATCACGAAGCGAGATTTATTTTAAAAAGTCATAGG
GTCTGGGAAACTTTTCTTTTTGAGAAGGTTGGATATACAATGGAGGAAGTGCATGATGAAGCCGAAAATTTAGAACATGC
TTCATCACCAAGGTTGATTGAATCTCTATATGTCCTGATGGGCTATCCAGCAACTGACCCTCACGGCTCAGAAATTCCTA
CAGAATCATTTTGGCTGAAAAATGAAGTGGAATTAACGCTTGATGAGGCACAAGTTGAACAGACCTATCATGTTACTCTG
ATAGAAGAAGAAGGAAAAAACTTTTTCAAAAAATTAGAAATTTCTCTTCCGCATCTTATTAAAGTAATCGATATATTAGA
AGATAAATCAATAATTATTAAAGAAGATAGAGAAAGTTCAATTGTTATTCCACCATTTTTACAGGATAAAATTCATCTCA
TGCATAGAAGATAA

Upstream 100 bases:

>100_bases
ACTTTAAATAAAAAATAAAAGTGGTGATAATTTGTCCCACTTTTATTTTACTTTGGTATAGTCTATGCTATAATTAAATC
AAGAAAAGTAAGGTAAAAAA

Downstream 100 bases:

>100_bases
GATAACACTAAAAGTCCAAGTAATTTATTTGGACTTTTTATTTTTGAGTTTTCATATAGTTTAAAACTATAGGTCATCAT
ATTAAAAATGTATTATTAAA

Product: metalloregulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 217; Mature: 217

Protein sequence:

>217_residues
MKTSKNEQDYLKAIYSLKNENNGSVSINAIAQKLSVSSPSATEMIKRLAKKELVIHKPYYGVSLTDLGNHEARFILKSHR
VWETFLFEKVGYTMEEVHDEAENLEHASSPRLIESLYVLMGYPATDPHGSEIPTESFWLKNEVELTLDEAQVEQTYHVTL
IEEEGKNFFKKLEISLPHLIKVIDILEDKSIIIKEDRESSIVIPPFLQDKIHLMHRR

Sequences:

>Translated_217_residues
MKTSKNEQDYLKAIYSLKNENNGSVSINAIAQKLSVSSPSATEMIKRLAKKELVIHKPYYGVSLTDLGNHEARFILKSHR
VWETFLFEKVGYTMEEVHDEAENLEHASSPRLIESLYVLMGYPATDPHGSEIPTESFWLKNEVELTLDEAQVEQTYHVTL
IEEEGKNFFKKLEISLPHLIKVIDILEDKSIIIKEDRESSIVIPPFLQDKIHLMHRR
>Mature_217_residues
MKTSKNEQDYLKAIYSLKNENNGSVSINAIAQKLSVSSPSATEMIKRLAKKELVIHKPYYGVSLTDLGNHEARFILKSHR
VWETFLFEKVGYTMEEVHDEAENLEHASSPRLIESLYVLMGYPATDPHGSEIPTESFWLKNEVELTLDEAQVEQTYHVTL
IEEEGKNFFKKLEISLPHLIKVIDILEDKSIIIKEDRESSIVIPPFLQDKIHLMHRR

Specific function: In the presence of manganese, it represses the manganese transporter mnth [C]

COG id: COG1321

COG function: function code K; Mn-dependent transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH dtxR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001367
- InterPro:   IPR022689
- InterPro:   IPR022687
- InterPro:   IPR011991 [H]

Pfam domain/function: PF02742 Fe_dep_repr_C; PF01325 Fe_dep_repress [H]

EC number: NA

Molecular weight: Translated: 25034; Mature: 25034

Theoretical pI: Translated: 5.79; Mature: 5.79

Prosite motif: PS50944 HTH_DTXR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTSKNEQDYLKAIYSLKNENNGSVSINAIAQKLSVSSPSATEMIKRLAKKELVIHKPYY
CCCCCCHHHHHHHHHHHCCCCCCCEEHHHHHHHHCCCCCCHHHHHHHHHHHCEEEECCCC
GVSLTDLGNHEARFILKSHRVWETFLFEKVGYTMEEVHDEAENLEHASSPRLIESLYVLM
CEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHH
GYPATDPHGSEIPTESFWLKNEVELTLDEAQVEQTYHVTLIEEEGKNFFKKLEISLPHLI
CCCCCCCCCCCCCCCCEEECCCEEEEECHHHHCCEEEEEEEECCCHHHHHHHHCCHHHHH
KVIDILEDKSIIIKEDRESSIVIPPFLQDKIHLMHRR
HHHHHHCCCCEEEEECCCCCEEECCHHHHHHHHHCCC
>Mature Secondary Structure
MKTSKNEQDYLKAIYSLKNENNGSVSINAIAQKLSVSSPSATEMIKRLAKKELVIHKPYY
CCCCCCHHHHHHHHHHHCCCCCCCEEHHHHHHHHCCCCCCHHHHHHHHHHHCEEEECCCC
GVSLTDLGNHEARFILKSHRVWETFLFEKVGYTMEEVHDEAENLEHASSPRLIESLYVLM
CEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHH
GYPATDPHGSEIPTESFWLKNEVELTLDEAQVEQTYHVTLIEEEGKNFFKKLEISLPHLI
CCCCCCCCCCCCCCCCEEECCCEEEEECHHHHCCEEEEEEEECCCHHHHHHHHCCHHHHH
KVIDILEDKSIIIKEDRESSIVIPPFLQDKIHLMHRR
HHHHHHCCCCEEEEECCCCCEEECCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]