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The map label for this gene is hsdS

Identifier: 15672634

GI number: 15672634

Start: 645351

End: 646574

Strand: Direct

Name: hsdS

Synonym: L0310

Alternate gene names: NA

Gene position: 645351-646574 (Clockwise)

Preceding gene: 15672633

Following gene: 30024003

Centisome position: 27.28

GC content: 35.13

Gene sequence:

>1224_bases
ATGAAGGAAAGATTAAAGGCTCCAGAATTAAGGTTTGATGGTTTTACGGATGATTGGGAAGAGCGTAAGTTATTAGACAA
TGTAGAAAAAGTATTAGATTATCGTGGTAAAAGCCCCGCTAAGTTTGGAATGGAATGGGGTACAGAAGGTTATCTTGTTC
TTTCTGCTTTGAATGTTAAAAATGGATACATTGATAAATCTGTTGAAGCAAAGTATGGGGATCATGAATTATTTGACAGA
TGGATGGGGAACAATCGGTTAGAAAAAGGAGATGTTGTTTTTACAACAGAAGCTCCTTTAGGCAATGTAGCTCAAGTACC
CGATAATAACGGATATATATTAAACCAAAGAGCGGTTGCATTTAAATCTTTGCAAGAAACAGATGATAATTTCTTTGCGC
AATTACTACGAAGTCCTATTGTTCAAAATACATTAAAAGCTAGTTCTTCTGGGGGAACTGCCAAAGGTATTGGAATGAAA
GAATTTGCTAAACTTAATGCTCGAGTTCCCGAAACACATGAAGAACAACGAAAAATAGGGTTATTCTTCAAACAGCTAGA
CGACACTATCGTTCTTCATCAACGTAAGTTAGATCTTCTCAAAGAGCAGAAAAAAGGATACTTGCAAAAAATGTTCCCCA
AAAATGGTTCAAAAATTCCTGAATTGAGATTTGCGGAGTTTGCTGACGATTGGGAAGAACGTAAGTTGGGTGAAGTTGCA
ACATTTCTAAACGGACGAGCATATAAGCAAGATGAATTACTGGATTCAGGTAAATATAAAGTGCTTCGCGTCGGCAATTT
TTATACCAATGATTCTTGGTACTACTCTAATATGGAGCTTGGTGATAAATATTATGTTGATAAAGGTGATCTAGTTTATA
CTTGGTCAGCGACATTTGGCCCACATATTTGGAGTGGCGAAAAAGTTATTTACCATTATCACATCTGGAAAGTCGAGCTT
TCTAAATTTCTTGATAGGAATTTTACATTGCAACTTTTAGAAGCGGATAAAGCAAGATTGTTATCCAGTACAAATGGTTC
AACAATGATTCATGTAACCAAGGGAGATATGGAAAGTAAAATTGTTTCTATTCCTAATATTGATGAGCAAAAACAAATTG
GTTCATTCTTCAAACAACTCGACAACACTATCACCCTTCATCAACGTAAGTTAGATTTGTTGAAAGAGCAGAAAAAAGGA
TTTCTACAAAAAATGTTCATTTAA

Upstream 100 bases:

>100_bases
ACTTAGCGGATATTCAAGGTCAAATAGATGAAGTAGACGCAGAGATTGCGAAAGCTAATCAAACCTTAGCAAACTACTTT
AAGGAACTGGGAGTGCTAAA

Downstream 100 bases:

>100_bases
CAAATTTAGGAGCCTTCACTATGGAAACTATACAAAAATATTTAAAGATAATTGTTGAAAGTAATTATCTTCATCAACGT
AAGTTAGACTTGCTTAAGGA

Product: type I restriction enzyme specificity protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 407; Mature: 407

Protein sequence:

>407_residues
MKERLKAPELRFDGFTDDWEERKLLDNVEKVLDYRGKSPAKFGMEWGTEGYLVLSALNVKNGYIDKSVEAKYGDHELFDR
WMGNNRLEKGDVVFTTEAPLGNVAQVPDNNGYILNQRAVAFKSLQETDDNFFAQLLRSPIVQNTLKASSSGGTAKGIGMK
EFAKLNARVPETHEEQRKIGLFFKQLDDTIVLHQRKLDLLKEQKKGYLQKMFPKNGSKIPELRFAEFADDWEERKLGEVA
TFLNGRAYKQDELLDSGKYKVLRVGNFYTNDSWYYSNMELGDKYYVDKGDLVYTWSATFGPHIWSGEKVIYHYHIWKVEL
SKFLDRNFTLQLLEADKARLLSSTNGSTMIHVTKGDMESKIVSIPNIDEQKQIGSFFKQLDNTITLHQRKLDLLKEQKKG
FLQKMFI

Sequences:

>Translated_407_residues
MKERLKAPELRFDGFTDDWEERKLLDNVEKVLDYRGKSPAKFGMEWGTEGYLVLSALNVKNGYIDKSVEAKYGDHELFDR
WMGNNRLEKGDVVFTTEAPLGNVAQVPDNNGYILNQRAVAFKSLQETDDNFFAQLLRSPIVQNTLKASSSGGTAKGIGMK
EFAKLNARVPETHEEQRKIGLFFKQLDDTIVLHQRKLDLLKEQKKGYLQKMFPKNGSKIPELRFAEFADDWEERKLGEVA
TFLNGRAYKQDELLDSGKYKVLRVGNFYTNDSWYYSNMELGDKYYVDKGDLVYTWSATFGPHIWSGEKVIYHYHIWKVEL
SKFLDRNFTLQLLEADKARLLSSTNGSTMIHVTKGDMESKIVSIPNIDEQKQIGSFFKQLDNTITLHQRKLDLLKEQKKG
FLQKMFI
>Mature_407_residues
MKERLKAPELRFDGFTDDWEERKLLDNVEKVLDYRGKSPAKFGMEWGTEGYLVLSALNVKNGYIDKSVEAKYGDHELFDR
WMGNNRLEKGDVVFTTEAPLGNVAQVPDNNGYILNQRAVAFKSLQETDDNFFAQLLRSPIVQNTLKASSSGGTAKGIGMK
EFAKLNARVPETHEEQRKIGLFFKQLDDTIVLHQRKLDLLKEQKKGYLQKMFPKNGSKIPELRFAEFADDWEERKLGEVA
TFLNGRAYKQDELLDSGKYKVLRVGNFYTNDSWYYSNMELGDKYYVDKGDLVYTWSATFGPHIWSGEKVIYHYHIWKVEL
SKFLDRNFTLQLLEADKARLLSSTNGSTMIHVTKGDMESKIVSIPNIDEQKQIGSFFKQLDNTITLHQRKLDLLKEQKKG
FLQKMFI

Specific function: Unknown

COG id: COG0732

COG function: function code V; Restriction endonuclease S subunits

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000055 [H]

Pfam domain/function: PF01420 Methylase_S [H]

EC number: NA

Molecular weight: Translated: 47069; Mature: 47069

Theoretical pI: Translated: 8.87; Mature: 8.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKERLKAPELRFDGFTDDWEERKLLDNVEKVLDYRGKSPAKFGMEWGTEGYLVLSALNVK
CCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCEEEEEEEECC
NGYIDKSVEAKYGDHELFDRWMGNNRLEKGDVVFTTEAPLGNVAQVPDNNGYILNQRAVA
CCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCEEEEECCCCCCEEECCCCCCEEEECHHHH
FKSLQETDDNFFAQLLRSPIVQNTLKASSSGGTAKGIGMKEFAKLNARVPETHEEQRKIG
HHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHH
LFFKQLDDTIVLHQRKLDLLKEQKKGYLQKMFPKNGSKIPELRFAEFADDWEERKLGEVA
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCHHHHHHHHHH
TFLNGRAYKQDELLDSGKYKVLRVGNFYTNDSWYYSNMELGDKYYVDKGDLVYTWSATFG
HHHCCCCCCHHHHHCCCCEEEEEECCEEECCCEEEECCCCCCEEEECCCCEEEEEECCCC
PHIWSGEKVIYHYHIWKVELSKFLDRNFTLQLLEADKARLLSSTNGSTMIHVTKGDMESK
CCEECCCEEEEEEEEEEEHHHHHHCCCCEEEEEEHHHHHHHHCCCCCEEEEEECCCCCCC
IVSIPNIDEQKQIGSFFKQLDNTITLHQRKLDLLKEQKKGFLQKMFI
EEECCCCCHHHHHHHHHHHHCCEEEHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKERLKAPELRFDGFTDDWEERKLLDNVEKVLDYRGKSPAKFGMEWGTEGYLVLSALNVK
CCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCEEEEEEEECC
NGYIDKSVEAKYGDHELFDRWMGNNRLEKGDVVFTTEAPLGNVAQVPDNNGYILNQRAVA
CCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCEEEEECCCCCCEEECCCCCCEEEECHHHH
FKSLQETDDNFFAQLLRSPIVQNTLKASSSGGTAKGIGMKEFAKLNARVPETHEEQRKIG
HHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHH
LFFKQLDDTIVLHQRKLDLLKEQKKGYLQKMFPKNGSKIPELRFAEFADDWEERKLGEVA
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCHHHHHHHHHH
TFLNGRAYKQDELLDSGKYKVLRVGNFYTNDSWYYSNMELGDKYYVDKGDLVYTWSATFG
HHHCCCCCCHHHHHCCCCEEEEEECCEEECCCEEEECCCCCCEEEECCCCEEEEEECCCC
PHIWSGEKVIYHYHIWKVELSKFLDRNFTLQLLEADKARLLSSTNGSTMIHVTKGDMESK
CCEECCCEEEEEEEEEEEHHHHHHCCCCEEEEEEHHHHHHHHCCCCCEEEEEECCCCCCC
IVSIPNIDEQKQIGSFFKQLDNTITLHQRKLDLLKEQKKGFLQKMFI
EEECCCCCHHHHHHHHHHHHCCEEEHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]