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The map label for this gene is ygdE

Identifier: 15672631

GI number: 15672631

Start: 637738

End: 638907

Strand: Direct

Name: ygdE

Synonym: L37749

Alternate gene names: NA

Gene position: 637738-638907 (Clockwise)

Preceding gene: 15672630

Following gene: 15672632

Centisome position: 26.96

GC content: 28.46

Gene sequence:

>1170_bases
ATGAAAAATGAAAATTTTGTACAAATTCCAAATAAGATGTTTGCAGACACAAATAATGATGAGAAACTTGTATATGCAAT
CTTGCAATATACACAAACAGTTGGTCTTTTAAATAAAGATAACAGAATGACAAGGACAATGATTCCTTTATTGGTATCAG
ATTTAGGTTGGTCTAAAGGTAAATATTCAAATAAGAAGGTTGTAACAGCTTTGAATGGTCTTAAAGAGAAAGAATACATT
AACTTTGAATCAACTCAGGGTGTGTTCACAGTTCAAATTAACAATATAGACAGTCAAGAAGAACATACAATTTCAGTTGA
CTGGAAAGAAAATAATGTTAAGTTTAGCGGATTTACAAAGATTAAATACAGTGTGATTGATAATTTGTTAGAAAATAAAG
ATTTTACTCTTTATTCTTATGCAGAATACAGAACAATGAAAACTCACCAATATAGAATCTGTTATGAGGAATGGAGTTTG
GTTCTTGGAATGACAAGTAGAAATGCGTTCACCGTTATAGATAATTCAGAAGTTATTGTTAGAGTTTCTAATGGCTTTGA
CTTAGACACTAACAGACGAGAAACAAACTCTTATTTAACTTTTGATTCTGTTGAAGATGTTAAAGAAGTTTCTTTGAAAC
CTACATACAAAGCTCAATCATCTAAGTCAGTTGTTAAAGAACAAGAACCTGAACTTGTTGAAGATGATTTTGATAATTTT
GAAGAGGAAGAACTTTCATTAAAACCAAAGGTAAAGAAAAGAAATGCAATTACAGATAAAAAAATAAATGATATGCAAAA
TGAATTTTTTGGAAGAACTATACACCATAAAATTCTTAAAAAAATAACTGACCCTAGAGTTAGAACTATTGAACAGGTAA
AAGAACTTACAGACTTTAAATATCCAATGTCTTTAGAAAATTATAATATTCTTATGACAACAAAAGATGGATATCTTACA
GAAAAAGGAAAAATTAAACTTGCCAATCCACAATGGAAAAACAGATACCTTAATAAATTAAACAGAGAATCTGCCCTCAA
ACAAAATAATGAGAGAGAACTTTCACAAGAAGAAATTAACGATATTATTCGATATCAATATGGCGAAGAAGATGAAGTAC
ATAAAAAGAAACGTAAGAAATTGGGTAATGATATTAGTAGATTTTTATAA

Upstream 100 bases:

>100_bases
TCCAAAGACAATGAAAGAATTTTGGGTCTATGTTAAAACAGAAGAGTTAGACAAAGCTCTTACAAATTATAAAAAATAGA
AAGAATTAGGTTAAGCGATT

Downstream 100 bases:

>100_bases
GAGGAAACAAACAATATTAATAGGAAATAGAAATTAGGAGAATACAAAATGGCAAATACAACAATCTGGAATGGAAATCA
GTTAAAGGCTTGGAGTGGTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 389; Mature: 389

Protein sequence:

>389_residues
MKNENFVQIPNKMFADTNNDEKLVYAILQYTQTVGLLNKDNRMTRTMIPLLVSDLGWSKGKYSNKKVVTALNGLKEKEYI
NFESTQGVFTVQINNIDSQEEHTISVDWKENNVKFSGFTKIKYSVIDNLLENKDFTLYSYAEYRTMKTHQYRICYEEWSL
VLGMTSRNAFTVIDNSEVIVRVSNGFDLDTNRRETNSYLTFDSVEDVKEVSLKPTYKAQSSKSVVKEQEPELVEDDFDNF
EEEELSLKPKVKKRNAITDKKINDMQNEFFGRTIHHKILKKITDPRVRTIEQVKELTDFKYPMSLENYNILMTTKDGYLT
EKGKIKLANPQWKNRYLNKLNRESALKQNNERELSQEEINDIIRYQYGEEDEVHKKKRKKLGNDISRFL

Sequences:

>Translated_389_residues
MKNENFVQIPNKMFADTNNDEKLVYAILQYTQTVGLLNKDNRMTRTMIPLLVSDLGWSKGKYSNKKVVTALNGLKEKEYI
NFESTQGVFTVQINNIDSQEEHTISVDWKENNVKFSGFTKIKYSVIDNLLENKDFTLYSYAEYRTMKTHQYRICYEEWSL
VLGMTSRNAFTVIDNSEVIVRVSNGFDLDTNRRETNSYLTFDSVEDVKEVSLKPTYKAQSSKSVVKEQEPELVEDDFDNF
EEEELSLKPKVKKRNAITDKKINDMQNEFFGRTIHHKILKKITDPRVRTIEQVKELTDFKYPMSLENYNILMTTKDGYLT
EKGKIKLANPQWKNRYLNKLNRESALKQNNERELSQEEINDIIRYQYGEEDEVHKKKRKKLGNDISRFL
>Mature_389_residues
MKNENFVQIPNKMFADTNNDEKLVYAILQYTQTVGLLNKDNRMTRTMIPLLVSDLGWSKGKYSNKKVVTALNGLKEKEYI
NFESTQGVFTVQINNIDSQEEHTISVDWKENNVKFSGFTKIKYSVIDNLLENKDFTLYSYAEYRTMKTHQYRICYEEWSL
VLGMTSRNAFTVIDNSEVIVRVSNGFDLDTNRRETNSYLTFDSVEDVKEVSLKPTYKAQSSKSVVKEQEPELVEDDFDNF
EEEELSLKPKVKKRNAITDKKINDMQNEFFGRTIHHKILKKITDPRVRTIEQVKELTDFKYPMSLENYNILMTTKDGYLT
EKGKIKLANPQWKNRYLNKLNRESALKQNNERELSQEEINDIIRYQYGEEDEVHKKKRKKLGNDISRFL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45823; Mature: 45823

Theoretical pI: Translated: 8.27; Mature: 8.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNENFVQIPNKMFADTNNDEKLVYAILQYTQTVGLLNKDNRMTRTMIPLLVSDLGWSKG
CCCCCEEECCHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCC
KYSNKKVVTALNGLKEKEYINFESTQGVFTVQINNIDSQEEHTISVDWKENNVKFSGFTK
CCCCCCHHHHHHCCCHHHEECEECCCCEEEEEECCCCCCCCCEEEEEEECCCEEECCCCE
IKYSVIDNLLENKDFTLYSYAEYRTMKTHQYRICYEEWSLVLGMTSRNAFTVIDNSEVIV
EHHHHHHHHHCCCCCEEEEHHHHHEECCCEEEEEHHHCEEEEEECCCCEEEEEECCEEEE
RVSNGFDLDTNRRETNSYLTFDSVEDVKEVSLKPTYKAQSSKSVVKEQEPELVEDDFDNF
EECCCCCCCCCCCCCCCEEEECCHHHHHHCCCCCCCCCCCHHHHHHHCCCCHHHHHHCCC
EEEELSLKPKVKKRNAITDKKINDMQNEFFGRTIHHKILKKITDPRVRTIEQVKELTDFK
CCHHCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCC
YPMSLENYNILMTTKDGYLTEKGKIKLANPQWKNRYLNKLNRESALKQNNERELSQEEIN
CCCEECCCEEEEEECCCEEECCCEEEECCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
DIIRYQYGEEDEVHKKKRKKLGNDISRFL
HHHHHCCCCCHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MKNENFVQIPNKMFADTNNDEKLVYAILQYTQTVGLLNKDNRMTRTMIPLLVSDLGWSKG
CCCCCEEECCHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCC
KYSNKKVVTALNGLKEKEYINFESTQGVFTVQINNIDSQEEHTISVDWKENNVKFSGFTK
CCCCCCHHHHHHCCCHHHEECEECCCCEEEEEECCCCCCCCCEEEEEEECCCEEECCCCE
IKYSVIDNLLENKDFTLYSYAEYRTMKTHQYRICYEEWSLVLGMTSRNAFTVIDNSEVIV
EHHHHHHHHHCCCCCEEEEHHHHHEECCCEEEEEHHHCEEEEEECCCCEEEEEECCEEEE
RVSNGFDLDTNRRETNSYLTFDSVEDVKEVSLKPTYKAQSSKSVVKEQEPELVEDDFDNF
EECCCCCCCCCCCCCCCEEEECCHHHHHHCCCCCCCCCCCHHHHHHHCCCCHHHHHHCCC
EEEELSLKPKVKKRNAITDKKINDMQNEFFGRTIHHKILKKITDPRVRTIEQVKELTDFK
CCHHCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCC
YPMSLENYNILMTTKDGYLTEKGKIKLANPQWKNRYLNKLNRESALKQNNERELSQEEIN
CCCEECCCEEEEEECCCEEECCCEEEECCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
DIIRYQYGEEDEVHKKKRKKLGNDISRFL
HHHHHCCCCCHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA