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The map label for this gene is ygdC

Identifier: 15672628

GI number: 15672628

Start: 635723

End: 636490

Strand: Direct

Name: ygdC

Synonym: L35731

Alternate gene names: NA

Gene position: 635723-636490 (Clockwise)

Preceding gene: 15672627

Following gene: 15672629

Centisome position: 26.87

GC content: 29.43

Gene sequence:

>768_bases
ATGGAAACGATAATTAAAAATAAAAAAATAGCCATAATTATTGCAATAATAGTTGTCTTAGGCACTATACTGTTAGGAGC
ATACCATCAATCAGTAAGCAGATATTCTTCTAAAATTGCTGTACAGATTGATAATGTTGAAAAATTGTCTGAAAACAATT
TTGCACCACAAAATCATGTTAATGATTATGGTCAATGGATTGTATTGTCTAAAAATGCGAATAACAAGTCAAATTTATTT
CAAATGATAAAAATGACAAGGGAATATGACAAAAAATTCTCTAAGGATGAATCTGAGGCTAAGAAAAACGAAAAAAAAAT
AACAGACGAAGTAAATAATAAATGGATAGAAATATATACACAATCCATGCTTAAAGCATCAGAATCAGAGTCTTATGGCA
ATAAAATCACTAAAGTCTGGAGAGATGCTATTTTTGAAAATTATGCCACTGTAAATGGAAAACACTATACTGATTTTAAA
GATGCTATTCATGCTTTTCAGACACAGTATAGTAATGAGTTTAGTGAATTGAATAGTTTCTTTCAAGACAATATTGACTC
TGCAAACAACCTTTCAGAATTAATAAGAATATATTTTCCAGAAAAATCAAATAGGGCTGATGATTTAGAGAACTTCGCTC
AGGATGTTTTTAATTTCAACGATGAAGCTATAAATCCATCTGGTTCATATTCAACTCGTTCATCTAAATTGAGCGAGTTA
GATACTAAGGCTTTATCTAGTTCTAAAACTGTTGGAATGAGTTTCTAA

Upstream 100 bases:

>100_bases
CACTGAGTGCTTATTCTCAGGATAAAGACACAGCTGAAACAAAAAGTACTACACAGAGCACAGTAAGAAATTTAATATAA
TTATTGGTTGAAAGGAAAAA

Downstream 100 bases:

>100_bases
AAAGAGTTCTGTTATAAAGTTTAACATATAATTCTTACTTAATTGTAAGAGTTTTTTTTATTATCATAAACTAAAATAAT
CAATTTTTATATGTTAATGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 255; Mature: 255

Protein sequence:

>255_residues
METIIKNKKIAIIIAIIVVLGTILLGAYHQSVSRYSSKIAVQIDNVEKLSENNFAPQNHVNDYGQWIVLSKNANNKSNLF
QMIKMTREYDKKFSKDESEAKKNEKKITDEVNNKWIEIYTQSMLKASESESYGNKITKVWRDAIFENYATVNGKHYTDFK
DAIHAFQTQYSNEFSELNSFFQDNIDSANNLSELIRIYFPEKSNRADDLENFAQDVFNFNDEAINPSGSYSTRSSKLSEL
DTKALSSSKTVGMSF

Sequences:

>Translated_255_residues
METIIKNKKIAIIIAIIVVLGTILLGAYHQSVSRYSSKIAVQIDNVEKLSENNFAPQNHVNDYGQWIVLSKNANNKSNLF
QMIKMTREYDKKFSKDESEAKKNEKKITDEVNNKWIEIYTQSMLKASESESYGNKITKVWRDAIFENYATVNGKHYTDFK
DAIHAFQTQYSNEFSELNSFFQDNIDSANNLSELIRIYFPEKSNRADDLENFAQDVFNFNDEAINPSGSYSTRSSKLSEL
DTKALSSSKTVGMSF
>Mature_255_residues
METIIKNKKIAIIIAIIVVLGTILLGAYHQSVSRYSSKIAVQIDNVEKLSENNFAPQNHVNDYGQWIVLSKNANNKSNLF
QMIKMTREYDKKFSKDESEAKKNEKKITDEVNNKWIEIYTQSMLKASESESYGNKITKVWRDAIFENYATVNGKHYTDFK
DAIHAFQTQYSNEFSELNSFFQDNIDSANNLSELIRIYFPEKSNRADDLENFAQDVFNFNDEAINPSGSYSTRSSKLSEL
DTKALSSSKTVGMSF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29220; Mature: 29220

Theoretical pI: Translated: 6.15; Mature: 6.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METIIKNKKIAIIIAIIVVLGTILLGAYHQSVSRYSSKIAVQIDNVEKLSENNFAPQNHV
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCHHHHHCCCCCCCCCC
NDYGQWIVLSKNANNKSNLFQMIKMTREYDKKFSKDESEAKKNEKKITDEVNNKWIEIYT
CCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHH
QSMLKASESESYGNKITKVWRDAIFENYATVNGKHYTDFKDAIHAFQTQYSNEFSELNSF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
FQDNIDSANNLSELIRIYFPEKSNRADDLENFAQDVFNFNDEAINPSGSYSTRSSKLSEL
HHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHH
DTKALSSSKTVGMSF
HHHHHHCCCCCCCCC
>Mature Secondary Structure
METIIKNKKIAIIIAIIVVLGTILLGAYHQSVSRYSSKIAVQIDNVEKLSENNFAPQNHV
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCHHHHHCCCCCCCCCC
NDYGQWIVLSKNANNKSNLFQMIKMTREYDKKFSKDESEAKKNEKKITDEVNNKWIEIYT
CCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHH
QSMLKASESESYGNKITKVWRDAIFENYATVNGKHYTDFKDAIHAFQTQYSNEFSELNSF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
FQDNIDSANNLSELIRIYFPEKSNRADDLENFAQDVFNFNDEAINPSGSYSTRSSKLSEL
HHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHH
DTKALSSSKTVGMSF
HHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA