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The map label for this gene is ygbE

Identifier: 15672610

GI number: 15672610

Start: 616805

End: 617701

Strand: Direct

Name: ygbE

Synonym: L16806

Alternate gene names: 15672610

Gene position: 616805-617701 (Clockwise)

Preceding gene: 15672609

Following gene: 15672611

Centisome position: 26.07

GC content: 36.01

Gene sequence:

>897_bases
ATGATTTTTATTCCACTCGTTGTTTTAGCAATTATCCTGCTCATTTTAATCTTTAGTTTGAGTACAATTGTATTTGTTGT
TAAACAACAAACTGTTGCAATTGTTGAACGTTTTGGGAAGTATCAATTTACTGCAAACCCTGGTTTTCATTTGAAACTTC
CTTGGGGAATTGATCGGATTGCTGCTCGAGTTCAATTGCGCTTATTACAAACAGAGATGACAGTTGAAACTAAAACTGCG
GATAATGTTTTTGTTACGATGAATATTGCAACGCAATATCGAGTAAACGAACAATCCATCAAAGATGCATACTATAAGTT
AATGAATCCAGGTGAACAAATTAAGGCTTATATTGAAGATGCCCTTCGTTCAGCAGTACCAAAATTGACTTTGGATGATG
TTTTTGAGAAAAAAGATGAAATCGCTCTTGAAGTTCAAAAAACAGTTGCTGAAGAAATGCAAACTTACGGTTATATTATC
GTAAAAACATTGATTACTAAAGTAGAACCTGATGCTGAAGTTAAGCAATCTATGAATGAAATCAATGCGGCACAACGTAA
ACAAGATGCCAGCCAAATGTTGGCAAATGCTAATAAAATTCAAGTTGTAACTGCCGCTGAAGCAGAAGCTGAAAAAGACC
GTCTGCATGGGGTAGGGATTGCTGAACAACGTAAGGCTATTGTTGACGGTTTGGCTCAACAAATTACCGAAATCAAAAAG
CTTGGTGTGGCGCTTGATGAAGAACAAATTATGGCGATTTTGTTAACTAACCAATATTTAGATACCTTGAATCAATTTGC
TGCAGGTGGAAATTCAACCATTTTCCTTCCAAGCGGAGCTGAAGGAGCAGAAAGTTTAAGGACTCAGATTTTATCAGCTA
TTAAAGCAGGTAAATAA

Upstream 100 bases:

>100_bases
TACTGGCGATGCTGTCAGTAATTAATAAGACTGAATTTTTCATAATTACTGACAGAAAAGTTTGTCAGTAACTTTTGGTC
AAATATAAGGAGGAACTTTT

Downstream 100 bases:

>100_bases
AGTAAAAATGGAAAGCTATCGATGGATAGCTTTTTTTATTATAGCAAGCTTCTTCTTGCAATTTTTTTTGAAATTAGGTA
GAATAAAGTGATTGTAGCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 298; Mature: 298

Protein sequence:

>298_residues
MIFIPLVVLAIILLILIFSLSTIVFVVKQQTVAIVERFGKYQFTANPGFHLKLPWGIDRIAARVQLRLLQTEMTVETKTA
DNVFVTMNIATQYRVNEQSIKDAYYKLMNPGEQIKAYIEDALRSAVPKLTLDDVFEKKDEIALEVQKTVAEEMQTYGYII
VKTLITKVEPDAEVKQSMNEINAAQRKQDASQMLANANKIQVVTAAEAEAEKDRLHGVGIAEQRKAIVDGLAQQITEIKK
LGVALDEEQIMAILLTNQYLDTLNQFAAGGNSTIFLPSGAEGAESLRTQILSAIKAGK

Sequences:

>Translated_298_residues
MIFIPLVVLAIILLILIFSLSTIVFVVKQQTVAIVERFGKYQFTANPGFHLKLPWGIDRIAARVQLRLLQTEMTVETKTA
DNVFVTMNIATQYRVNEQSIKDAYYKLMNPGEQIKAYIEDALRSAVPKLTLDDVFEKKDEIALEVQKTVAEEMQTYGYII
VKTLITKVEPDAEVKQSMNEINAAQRKQDASQMLANANKIQVVTAAEAEAEKDRLHGVGIAEQRKAIVDGLAQQITEIKK
LGVALDEEQIMAILLTNQYLDTLNQFAAGGNSTIFLPSGAEGAESLRTQILSAIKAGK
>Mature_298_residues
MIFIPLVVLAIILLILIFSLSTIVFVVKQQTVAIVERFGKYQFTANPGFHLKLPWGIDRIAARVQLRLLQTEMTVETKTA
DNVFVTMNIATQYRVNEQSIKDAYYKLMNPGEQIKAYIEDALRSAVPKLTLDDVFEKKDEIALEVQKTVAEEMQTYGYII
VKTLITKVEPDAEVKQSMNEINAAQRKQDASQMLANANKIQVVTAAEAEAEKDRLHGVGIAEQRKAIVDGLAQQITEIKK
LGVALDEEQIMAILLTNQYLDTLNQFAAGGNSTIFLPSGAEGAESLRTQILSAIKAGK

Specific function: Unknown

COG id: COG0330

COG function: function code O; Membrane protease subunits, stomatin/prohibitin homologs

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the band 7/mec-2 family [H]

Homologues:

Organism=Escherichia coli, GI1786697, Length=285, Percent_Identity=24.5614035087719, Blast_Score=67, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001107
- InterPro:   IPR018080
- InterPro:   IPR001972 [H]

Pfam domain/function: PF01145 Band_7 [H]

EC number: NA

Molecular weight: Translated: 33072; Mature: 33072

Theoretical pI: Translated: 5.25; Mature: 5.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIFIPLVVLAIILLILIFSLSTIVFVVKQQTVAIVERFGKYQFTANPGFHLKLPWGIDRI
CEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCEEEECCCCHHHH
AARVQLRLLQTEMTVETKTADNVFVTMNIATQYRVNEQSIKDAYYKLMNPGEQIKAYIED
HHHHHHHHHHHHHEEEEECCCCEEEEEEEEEEEECCHHHHHHHHHHHHCCHHHHHHHHHH
ALRSAVPKLTLDDVFEKKDEIALEVQKTVAEEMQTYGYIIVKTLITKVEPDAEVKQSMNE
HHHHHCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
INAAQRKQDASQMLANANKIQVVTAAEAEAEKDRLHGVGIAEQRKAIVDGLAQQITEIKK
HHHHHHHHHHHHHHHCCCEEEEEEECHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
LGVALDEEQIMAILLTNQYLDTLNQFAAGGNSTIFLPSGAEGAESLRTQILSAIKAGK
HCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MIFIPLVVLAIILLILIFSLSTIVFVVKQQTVAIVERFGKYQFTANPGFHLKLPWGIDRI
CEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCEEEECCCCHHHH
AARVQLRLLQTEMTVETKTADNVFVTMNIATQYRVNEQSIKDAYYKLMNPGEQIKAYIED
HHHHHHHHHHHHHEEEEECCCCEEEEEEEEEEEECCHHHHHHHHHHHHCCHHHHHHHHHH
ALRSAVPKLTLDDVFEKKDEIALEVQKTVAEEMQTYGYIIVKTLITKVEPDAEVKQSMNE
HHHHHCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
INAAQRKQDASQMLANANKIQVVTAAEAEAEKDRLHGVGIAEQRKAIVDGLAQQITEIKK
HHHHHHHHHHHHHHHCCCEEEEEEECHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
LGVALDEEQIMAILLTNQYLDTLNQFAAGGNSTIFLPSGAEGAESLRTQILSAIKAGK
HCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]