Definition | Lactococcus lactis subsp. lactis Il1403, complete genome. |
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Accession | NC_002662 |
Length | 2,365,589 |
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The map label for this gene is yfjF
Identifier: 15672591
GI number: 15672591
Start: 598274
End: 599779
Strand: Reverse
Name: yfjF
Synonym: L198289
Alternate gene names: 15672591
Gene position: 599779-598274 (Counterclockwise)
Preceding gene: 15672596
Following gene: 30024002
Centisome position: 25.35
GC content: 38.38
Gene sequence:
>1506_bases ATGGCAAAATCAAAAAAGAATGAAAAAGAAAAATTGCCAAAGGAATTGACGCGAAATGCTTGGATTTTAGTCGTTGGTGC TATTGCTCCAATGCTTGATTCAACCATGGTCAATATCGCAATCAACAAACTTCAAAGTGACTTACATACTTCACTAGACA TGATTCAGTGGGCAATTACAGGCTACGTTCTTGCACTTGCTGTAGCCGTCCCTGTCTGTGGTTATGTTGTCAATCACATT GATGGAAAAAAAGTAATGCAGTGGTCACTCCTTAGTTTTGGACTTTTTAGCTTTTTATCTGGAATTGCTTGGAATATTGA TAGTTTTATCATTTTCCGAGCTGTTCAAGGATTTTCAGCTGGTTTTATCACTTTACTGATGACAACCCTGCTAATGCAAA TTACGCCTCCAGATAAACTTGGTCAATTGATGGCTGTTGTCTCAACTCCTATTATTCTTGGACCAATTATCGGGCCAGTA CTTGGTGGTGCAATTGTATCTGGAGCAAATTGGCACTGGATTTTCTATATCAATATTCCGGTAGTAATTATTGCAGTCCT CCTTAATCATTTTTATCTGAGTTCTTTCAAACCTTTCAACCCTAAAGCTAAACTAGATTGGTTTGGAACACTCCTTTTGG CTGGCGGTTCTGTGGGATTAATTTACGGAATGATGAAGGGTTCAACTAATGCTAAAAATTTTTTCAATAGTCAAATGATT ACTTTTGTCATCATTGGCTTAGCCTTGTTTGTTATTTACGGAATTTATAATCGCATTCGCAAAAATAATACTGTTCTTCC GCTCAGATTTTTCAAATCTAAAAACTTCACTGCAGCGAATATTGGAATCTTTTTAGCTGGAATTGCTTCTAATGGACCTA TGCTTTTACTGCCACTTTTCTTTCAAAATACAAAAGGCTTTACAGCCGTTGAAGCAGGTCTAATGTTGATTCCCCAAGGG CTTGGTATGATGGTGACTCGACCTTTGATTGGGAAGATGATTGACCGTATGGGAGCTCGTCCTGTAGTACTTGTTTCCCT GGCTATTTCCCTTCTTGGAACACTTCCTTTCATTTTTGTTCACGAAAATACAAATTTGATTTGGTTGGGATTGGTTTTAT TTGTTCGTGGAATGGGAATTGGTGGTTTGCAAATGCCAATGATGACTGATATTTTCATTGGTTTAGACAAACAAGATATC CCTGGTGCATCAGTAGGACAAAGAATCATTCAAAACGTTGGTTCATCTTTTGGTTCAGCCGTCATCTCGGCAGTTGTGAC GGCGGTTGTGACGTCTGAAATTGCTGGACAGATGACAACTAAACTACATCAATTAGCGGCGATGCACACCAATTTAACAC CGACTGTCATTGCAAAAGCAAAAACTTCTGTTGAAAAAGCGGTCACGCTTAATGGTTATCAACTTGGCTTTCTTGTCTCT TCGATTGTTTTAATTGTGATTGCTATTCCAGCCATGTTCCTTTCACAAAAGAAGGTCAACAAATAA
Upstream 100 bases:
>100_bases AATAATTTTGTATTTAAGATACAAAATGTATGTTATTTTTAAATTATAATTCCTAAGTTTTGATAACTTAGTTTTCGCTC AGACGAAAGAAAGGATTAAC
Downstream 100 bases:
>100_bases AATTCGTAGTTTTTAGCTTTGATTTCACTTGTTTTTTGATATAATTGAATTGAATTATCTCAATAATAGATAGATGAACT TTAATCAATTAACTGAGCTT
Product: membrane-bound transport protein
Products: Proton [Cytoplasm]; multidrug [Periplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 501; Mature: 500
Protein sequence:
>501_residues MAKSKKNEKEKLPKELTRNAWILVVGAIAPMLDSTMVNIAINKLQSDLHTSLDMIQWAITGYVLALAVAVPVCGYVVNHI DGKKVMQWSLLSFGLFSFLSGIAWNIDSFIIFRAVQGFSAGFITLLMTTLLMQITPPDKLGQLMAVVSTPIILGPIIGPV LGGAIVSGANWHWIFYINIPVVIIAVLLNHFYLSSFKPFNPKAKLDWFGTLLLAGGSVGLIYGMMKGSTNAKNFFNSQMI TFVIIGLALFVIYGIYNRIRKNNTVLPLRFFKSKNFTAANIGIFLAGIASNGPMLLLPLFFQNTKGFTAVEAGLMLIPQG LGMMVTRPLIGKMIDRMGARPVVLVSLAISLLGTLPFIFVHENTNLIWLGLVLFVRGMGIGGLQMPMMTDIFIGLDKQDI PGASVGQRIIQNVGSSFGSAVISAVVTAVVTSEIAGQMTTKLHQLAAMHTNLTPTVIAKAKTSVEKAVTLNGYQLGFLVS SIVLIVIAIPAMFLSQKKVNK
Sequences:
>Translated_501_residues MAKSKKNEKEKLPKELTRNAWILVVGAIAPMLDSTMVNIAINKLQSDLHTSLDMIQWAITGYVLALAVAVPVCGYVVNHI DGKKVMQWSLLSFGLFSFLSGIAWNIDSFIIFRAVQGFSAGFITLLMTTLLMQITPPDKLGQLMAVVSTPIILGPIIGPV LGGAIVSGANWHWIFYINIPVVIIAVLLNHFYLSSFKPFNPKAKLDWFGTLLLAGGSVGLIYGMMKGSTNAKNFFNSQMI TFVIIGLALFVIYGIYNRIRKNNTVLPLRFFKSKNFTAANIGIFLAGIASNGPMLLLPLFFQNTKGFTAVEAGLMLIPQG LGMMVTRPLIGKMIDRMGARPVVLVSLAISLLGTLPFIFVHENTNLIWLGLVLFVRGMGIGGLQMPMMTDIFIGLDKQDI PGASVGQRIIQNVGSSFGSAVISAVVTAVVTSEIAGQMTTKLHQLAAMHTNLTPTVIAKAKTSVEKAVTLNGYQLGFLVS SIVLIVIAIPAMFLSQKKVNK >Mature_500_residues AKSKKNEKEKLPKELTRNAWILVVGAIAPMLDSTMVNIAINKLQSDLHTSLDMIQWAITGYVLALAVAVPVCGYVVNHID GKKVMQWSLLSFGLFSFLSGIAWNIDSFIIFRAVQGFSAGFITLLMTTLLMQITPPDKLGQLMAVVSTPIILGPIIGPVL GGAIVSGANWHWIFYINIPVVIIAVLLNHFYLSSFKPFNPKAKLDWFGTLLLAGGSVGLIYGMMKGSTNAKNFFNSQMIT FVIIGLALFVIYGIYNRIRKNNTVLPLRFFKSKNFTAANIGIFLAGIASNGPMLLLPLFFQNTKGFTAVEAGLMLIPQGL GMMVTRPLIGKMIDRMGARPVVLVSLAISLLGTLPFIFVHENTNLIWLGLVLFVRGMGIGGLQMPMMTDIFIGLDKQDIP GASVGQRIIQNVGSSFGSAVISAVVTAVVTSEIAGQMTTKLHQLAAMHTNLTPTVIAKAKTSVEKAVTLNGYQLGFLVSS IVLIVIAIPAMFLSQKKVNK
Specific function: Translocase That Confers Resistance To Substances Of High Hydrophobicity. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. EmrB family [H]
Homologues:
Organism=Escherichia coli, GI1789042, Length=410, Percent_Identity=27.5609756097561, Blast_Score=164, Evalue=1e-41, Organism=Escherichia coli, GI1788710, Length=395, Percent_Identity=30.8860759493671, Blast_Score=155, Evalue=6e-39, Organism=Escherichia coli, GI1790195, Length=434, Percent_Identity=26.2672811059908, Blast_Score=142, Evalue=4e-35, Organism=Escherichia coli, GI87081983, Length=426, Percent_Identity=25.3521126760563, Blast_Score=117, Evalue=1e-27, Organism=Escherichia coli, GI1788392, Length=372, Percent_Identity=29.3010752688172, Blast_Score=109, Evalue=4e-25, Organism=Saccharomyces cerevisiae, GI6319770, Length=466, Percent_Identity=22.5321888412017, Blast_Score=91, Evalue=5e-19, Organism=Saccharomyces cerevisiae, GI6322958, Length=429, Percent_Identity=22.8438228438228, Blast_Score=75, Evalue=3e-14, Organism=Saccharomyces cerevisiae, GI6323735, Length=307, Percent_Identity=20.8469055374593, Blast_Score=64, Evalue=5e-11, Organism=Saccharomyces cerevisiae, GI6321663, Length=131, Percent_Identity=29.0076335877863, Blast_Score=63, Evalue=8e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004638 - InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 54234; Mature: 54103
Theoretical pI: Translated: 10.65; Mature: 10.65
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKSKKNEKEKLPKELTRNAWILVVGAIAPMLDSTMVNIAINKLQSDLHTSLDMIQWAIT CCCCCCCHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GYVLALAVAVPVCGYVVNHIDGKKVMQWSLLSFGLFSFLSGIAWNIDSFIIFRAVQGFSA HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCH GFITLLMTTLLMQITPPDKLGQLMAVVSTPIILGPIIGPVLGGAIVSGANWHWIFYINIP HHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCEEEEEEECHH VVIIAVLLNHFYLSSFKPFNPKAKLDWFGTLLLAGGSVGLIYGMMKGSTNAKNFFNSQMI HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHH TFVIIGLALFVIYGIYNRIRKNNTVLPLRFFKSKNFTAANIGIFLAGIASNGPMLLLPLF HHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCEEEHHEEEEEECCCCCEEEEEEE FQNTKGFTAVEAGLMLIPQGLGMMVTRPLIGKMIDRMGARPVVLVSLAISLLGTLPFIFV CCCCCCCHHHHHCHHEECCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEE HENTNLIWLGLVLFVRGMGIGGLQMPMMTDIFIGLDKQDIPGASVGQRIIQNVGSSFGSA ECCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHH VISAVVTAVVTSEIAGQMTTKLHQLAAMHTNLTPTVIAKAKTSVEKAVTLNGYQLGFLVS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHEECCCHHHHHHH SIVLIVIAIPAMFLSQKKVNK HHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure AKSKKNEKEKLPKELTRNAWILVVGAIAPMLDSTMVNIAINKLQSDLHTSLDMIQWAIT CCCCCCHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GYVLALAVAVPVCGYVVNHIDGKKVMQWSLLSFGLFSFLSGIAWNIDSFIIFRAVQGFSA HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCH GFITLLMTTLLMQITPPDKLGQLMAVVSTPIILGPIIGPVLGGAIVSGANWHWIFYINIP HHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCEEEEEEECHH VVIIAVLLNHFYLSSFKPFNPKAKLDWFGTLLLAGGSVGLIYGMMKGSTNAKNFFNSQMI HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHH TFVIIGLALFVIYGIYNRIRKNNTVLPLRFFKSKNFTAANIGIFLAGIASNGPMLLLPLF HHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCEEEHHEEEEEECCCCCEEEEEEE FQNTKGFTAVEAGLMLIPQGLGMMVTRPLIGKMIDRMGARPVVLVSLAISLLGTLPFIFV CCCCCCCHHHHHCHHEECCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEE HENTNLIWLGLVLFVRGMGIGGLQMPMMTDIFIGLDKQDIPGASVGQRIIQNVGSSFGSA ECCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHH VISAVVTAVVTSEIAGQMTTKLHQLAAMHTNLTPTVIAKAKTSVEKAVTLNGYQLGFLVS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHEECCCHHHHHHH SIVLIVIAIPAMFLSQKKVNK HHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; multidrug [Cytoplasm] [C]
Specific reaction: Proton [Periplasm] + multidrug [Cytoplasm] = Proton [Cytoplasm] + multidrug [Periplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]