Definition | Lactococcus lactis subsp. lactis Il1403, complete genome. |
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Accession | NC_002662 |
Length | 2,365,589 |
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The map label for this gene is ps215
Identifier: 15672499
GI number: 15672499
Start: 509002
End: 510444
Strand: Direct
Name: ps215
Synonym: L109011
Alternate gene names: NA
Gene position: 509002-510444 (Clockwise)
Preceding gene: 15672498
Following gene: 15672500
Centisome position: 21.52
GC content: 36.24
Gene sequence:
>1443_bases GTGACTAATGTAGATGATGATTTTCAAAATATGATTAACAGCTACGAGGAAGAAAAAGCAAAAGCAGAGAGTAAGAAGTC AGAACAAAAACCACCTCAGAGCGATAAAATCGTTAAAGTTAAATTTGAAGCTGAAAATTTCGCCCTCAATCAGTATGGTA AACCAAAAGTAAATTCTTTAAAAAACATACGAATCGCCATAGAAAATGACAACATTTTAAAAAATCAATTTGTGTTTAAT TCTTTTACACAAGAAATAGAAATCAGAACCCCTTTCAAGTTGAGAGGAGTAGAGATTGAGAATGACGGGTTAAAAGAGGT TTATATTACGGCTATTCTTGAACATTTTGAAGAAAAATATGATGTTTTATTTGATAGTCGGCTTCTAGTCAATGTAATTA ATAAAATTGCTTACGAAAATAAATATAATCCTGTTCAAGATTTCATGGAAGACTGTTACAAGAATTGGGATAAGGTCAAA CGTGCAAGAAGTCTATTTCCTGATTATTTGGGGGCGAAAGAAAGTGATTTAACCGAACGAATGACCAAACTGTTTTTTGT TGGGGCTGTCAGTAAGGTTTATCGTCCTCATGATAAGTTTGACTTTGTTTTGGATTTGGTAGGAGGCCAAGGCTCTGGAA AGACGACCTTTCTTACTAAGATGGGGCAAGGCTGGTACACAGATTCAATGAAAAATTTTGATGATAAAGACCAGTTAGTC ATGATGTTACGTGCTTTGATTGTGAATGATGATGAAATGGCAATCAGTAACAAAATACCCTTTGCGGATTTAAAGAAGTT TATCACTCAAACAGTTTTGTCTTTCAGGGCGCCCTATGGCACAAAGGTAGAAAATTATGCCAAAAACTTTGTTATTGCTC GAACAACTAACCATGAAGAATATCAAAAAGACAGAACAGGGGCAAGGCGATTTCTTCCCGTTCATTGTTCAAAAGAGTTA CAAAAATATCATCCTGTTTCTGATTTAGATGATGCCACCGTCCGCCAAGTTTGGGGTGAGATGGTTCACTACTACAAGGA AGGGTTCAGTTTTAAACTCTCAGAGGAAGAAGAAAAGCAACTCAATTTGGAGCGATCAGATTATGAATATTTTGATGAAC AAGAAGAATTACTTGAACAGTACCTTGAAATTCCGATTCCTACAGATTTCTATAAAGTACAAGGAAATAATACAAGGATG CACGAGCGGAGAGCCTATATTGGCTTTATTCTTCAATCTGGAGAAACCCCTAAACATGAGTTTAGAGGGGAAATCAAACC AAGAGAATTTGTGACGGCTACCTATTTCTATTGGGAAGCGATGGGGATTGAGACTGGTAAGGGAAGCGCAAAAATAGTTT CTAAGTTCAAGAACTCGATGAATAATAAGAATGGCTGGCAAAAATCTAAACGGAAGGGGACGAGGGGTTATAAAAGAGAA TAG
Upstream 100 bases:
>100_bases ATTGAAGCGACTTGTGACGGGACTCAGAAACAAGGCTTACTGGCTGATTTTATAAGTCTTGCGGATGAATATTTTGATGA AAAAGAAAGAGAGGTGTTGA
Downstream 100 bases:
>100_bases GGGGCAAATTAAATGCCCCTAAAATTAAAATGCCCCCTTTGGAAATACCGCTTTCAAAACTTGTCAAGCGTTGGTACTAT TGAGCTTTTCAGGGGGCATT
Product: prophage ps2 protein 15
Products: NA
Alternate protein names: Virulence-Associated Protein E; Prophage Ps2 Protein; Virulence-Associated E; Prophage Lp3 Helicase; Phage Protein; Phage-Like Protein; DNA Primase Domain Protein; TraC Domain-Containing Protein; Virulence-Associated Protein E Family Protein; Phage-Related Virulence-Associated Protein E; Pyocin R2_PP TraC Domain Protein; APSE-2 Prophage; P-Loop ATPase And Inactivated Derivative; Imidazoleglycerol Phosphate Synthase; Virulence-Associated E Domain Protein; P-Loop ATPase And Inactivated Derivatives-Like; Virulence-Associated Protein E Domain-Containing Protein; Helicase; DNA Primase Domain-Containing Protein
Number of amino acids: Translated: 480; Mature: 479
Protein sequence:
>480_residues MTNVDDDFQNMINSYEEEKAKAESKKSEQKPPQSDKIVKVKFEAENFALNQYGKPKVNSLKNIRIAIENDNILKNQFVFN SFTQEIEIRTPFKLRGVEIENDGLKEVYITAILEHFEEKYDVLFDSRLLVNVINKIAYENKYNPVQDFMEDCYKNWDKVK RARSLFPDYLGAKESDLTERMTKLFFVGAVSKVYRPHDKFDFVLDLVGGQGSGKTTFLTKMGQGWYTDSMKNFDDKDQLV MMLRALIVNDDEMAISNKIPFADLKKFITQTVLSFRAPYGTKVENYAKNFVIARTTNHEEYQKDRTGARRFLPVHCSKEL QKYHPVSDLDDATVRQVWGEMVHYYKEGFSFKLSEEEEKQLNLERSDYEYFDEQEELLEQYLEIPIPTDFYKVQGNNTRM HERRAYIGFILQSGETPKHEFRGEIKPREFVTATYFYWEAMGIETGKGSAKIVSKFKNSMNNKNGWQKSKRKGTRGYKRE
Sequences:
>Translated_480_residues MTNVDDDFQNMINSYEEEKAKAESKKSEQKPPQSDKIVKVKFEAENFALNQYGKPKVNSLKNIRIAIENDNILKNQFVFN SFTQEIEIRTPFKLRGVEIENDGLKEVYITAILEHFEEKYDVLFDSRLLVNVINKIAYENKYNPVQDFMEDCYKNWDKVK RARSLFPDYLGAKESDLTERMTKLFFVGAVSKVYRPHDKFDFVLDLVGGQGSGKTTFLTKMGQGWYTDSMKNFDDKDQLV MMLRALIVNDDEMAISNKIPFADLKKFITQTVLSFRAPYGTKVENYAKNFVIARTTNHEEYQKDRTGARRFLPVHCSKEL QKYHPVSDLDDATVRQVWGEMVHYYKEGFSFKLSEEEEKQLNLERSDYEYFDEQEELLEQYLEIPIPTDFYKVQGNNTRM HERRAYIGFILQSGETPKHEFRGEIKPREFVTATYFYWEAMGIETGKGSAKIVSKFKNSMNNKNGWQKSKRKGTRGYKRE >Mature_479_residues TNVDDDFQNMINSYEEEKAKAESKKSEQKPPQSDKIVKVKFEAENFALNQYGKPKVNSLKNIRIAIENDNILKNQFVFNS FTQEIEIRTPFKLRGVEIENDGLKEVYITAILEHFEEKYDVLFDSRLLVNVINKIAYENKYNPVQDFMEDCYKNWDKVKR ARSLFPDYLGAKESDLTERMTKLFFVGAVSKVYRPHDKFDFVLDLVGGQGSGKTTFLTKMGQGWYTDSMKNFDDKDQLVM MLRALIVNDDEMAISNKIPFADLKKFITQTVLSFRAPYGTKVENYAKNFVIARTTNHEEYQKDRTGARRFLPVHCSKELQ KYHPVSDLDDATVRQVWGEMVHYYKEGFSFKLSEEEEKQLNLERSDYEYFDEQEELLEQYLEIPIPTDFYKVQGNNTRMH ERRAYIGFILQSGETPKHEFRGEIKPREFVTATYFYWEAMGIETGKGSAKIVSKFKNSMNNKNGWQKSKRKGTRGYKRE
Specific function: Unknown
COG id: COG5545
COG function: function code R; Predicted P-loop ATPase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 56374; Mature: 56243
Theoretical pI: Translated: 7.27; Mature: 7.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNVDDDFQNMINSYEEEKAKAESKKSEQKPPQSDKIVKVKFEAENFALNQYGKPKVNSL CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCEECCCCCCCCCCCC KNIRIAIENDNILKNQFVFNSFTQEIEIRTPFKLRGVEIENDGLKEVYITAILEHFEEKY CEEEEEEECCCEEHHHHHHHHHHCEEEECCCCEEECEEECCCCHHHHHHHHHHHHHHHHH DVLFDSRLLVNVINKIAYENKYNPVQDFMEDCYKNWDKVKRARSLFPDYLGAKESDLTER HHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCHHHHHHH MTKLFFVGAVSKVYRPHDKFDFVLDLVGGQGSGKTTFLTKMGQGWYTDSMKNFDDKDQLV HHHHHHHHHHHHHHCCCCHHHHHHHEECCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHH MMLRALIVNDDEMAISNKIPFADLKKFITQTVLSFRAPYGTKVENYAKNFVIARTTNHEE HHHHHHHCCCCCHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHCCEEEEECCCHHH YQKDRTGARRFLPVHCSKELQKYHPVSDLDDATVRQVWGEMVHYYKEGFSFKLSEEEEKQ HHHHHCCCCCEEEHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCEEECCCHHHH LNLERSDYEYFDEQEELLEQYLEIPIPTDFYKVQGNNTRMHERRAYIGFILQSGETPKHE CCCCCCCHHHCCHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHEEEECCCCCCHH FRGEIKPREFVTATYFYWEAMGIETGKGSAKIVSKFKNSMNNKNGWQKSKRKGTRGYKRE HCCCCCCHHHEEEHEEEEEEECCCCCCCHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCC >Mature Secondary Structure TNVDDDFQNMINSYEEEKAKAESKKSEQKPPQSDKIVKVKFEAENFALNQYGKPKVNSL CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCEECCCCCCCCCCCC KNIRIAIENDNILKNQFVFNSFTQEIEIRTPFKLRGVEIENDGLKEVYITAILEHFEEKY CEEEEEEECCCEEHHHHHHHHHHCEEEECCCCEEECEEECCCCHHHHHHHHHHHHHHHHH DVLFDSRLLVNVINKIAYENKYNPVQDFMEDCYKNWDKVKRARSLFPDYLGAKESDLTER HHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCHHHHHHH MTKLFFVGAVSKVYRPHDKFDFVLDLVGGQGSGKTTFLTKMGQGWYTDSMKNFDDKDQLV HHHHHHHHHHHHHHCCCCHHHHHHHEECCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHH MMLRALIVNDDEMAISNKIPFADLKKFITQTVLSFRAPYGTKVENYAKNFVIARTTNHEE HHHHHHHCCCCCHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHCCEEEEECCCHHH YQKDRTGARRFLPVHCSKELQKYHPVSDLDDATVRQVWGEMVHYYKEGFSFKLSEEEEKQ HHHHHCCCCCEEEHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCEEECCCHHHH LNLERSDYEYFDEQEELLEQYLEIPIPTDFYKVQGNNTRMHERRAYIGFILQSGETPKHE CCCCCCCHHHCCHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHEEEECCCCCCHH FRGEIKPREFVTATYFYWEAMGIETGKGSAKIVSKFKNSMNNKNGWQKSKRKGTRGYKRE HCCCCCCHHHEEEHEEEEEEECCCCCCCHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA