Definition | Lactococcus lactis subsp. lactis Il1403, complete genome. |
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Accession | NC_002662 |
Length | 2,365,589 |
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The map label for this gene is ps205
Identifier: 15672489
GI number: 15672489
Start: 505482
End: 505850
Strand: Reverse
Name: ps205
Synonym: L105494
Alternate gene names: NA
Gene position: 505850-505482 (Counterclockwise)
Preceding gene: 15672506
Following gene: 15672488
Centisome position: 21.38
GC content: 30.89
Gene sequence:
>369_bases ATGGATTTATACGAAAAAATAAAAGAACTCGCAGCCCAAAAACATACCTCTATTCGAAAAATAGAAGAACATTTAGGTTA TGGTAACGGAACTATAAGACGTTGGAATAAAAACAAACCAAACTACGATAAAATACAAGCAGTTGCAAAATATTTTAATG TAAGTGTGGATTATTTACTTGGAAATGAAGAATTAAAAAAGACCAATAAGCCAGTTGATTTAAAAAAAGTTATTAGTGAG AAAAAACCAACATCTTGGGATGATCCTCGCATAGACTGGAATGAGTGGGTTTCATTTGATGGTGAGCCAATTAGTGACGA TGTTAAAAAAATATTATTTGCAATATATGGCGATAAATTAACGGACTAA
Upstream 100 bases:
>100_bases TCTACAAAATTAATTATAGAACTTTTGCTACAAATTGTCAATAGTCTTGTCGCTTTTTTTCTAAATTATTTTTTGTGTTA TCTATGAAAGGTTGATATTA
Downstream 100 bases:
>100_bases AAGGAGCCTCTATGAATGAACAGGAATTGATAGGGTACCTTCTTTTGGAAATGGAAAAACAAAACATCCACATTACTTGT GATGATTGCTTTCCTAAAAA
Product: transcription repressor
Products: NA
Alternate protein names: Transcriptional Regulator; Phage Transcriptional Regulator; XRE Family Transcriptional Regulator; Cro/CI Family Phage Transcriptional Regulator; Cro/CI Family Transcriptional Regulator; Xin-Antitoxin System Antitoxin Component Xre Family; HTH-Type Transcriptional Regulator; Transcription Repressor; Repressor; Prophage Ps1 Protein; Phage Transcriptional Regulator Cro/CI Family; Phage Cro/CI Transcriptional Regulator
Number of amino acids: Translated: 122; Mature: 122
Protein sequence:
>122_residues MDLYEKIKELAAQKHTSIRKIEEHLGYGNGTIRRWNKNKPNYDKIQAVAKYFNVSVDYLLGNEELKKTNKPVDLKKVISE KKPTSWDDPRIDWNEWVSFDGEPISDDVKKILFAIYGDKLTD
Sequences:
>Translated_122_residues MDLYEKIKELAAQKHTSIRKIEEHLGYGNGTIRRWNKNKPNYDKIQAVAKYFNVSVDYLLGNEELKKTNKPVDLKKVISE KKPTSWDDPRIDWNEWVSFDGEPISDDVKKILFAIYGDKLTD >Mature_122_residues MDLYEKIKELAAQKHTSIRKIEEHLGYGNGTIRRWNKNKPNYDKIQAVAKYFNVSVDYLLGNEELKKTNKPVDLKKVISE KKPTSWDDPRIDWNEWVSFDGEPISDDVKKILFAIYGDKLTD
Specific function: Unknown
COG id: COG1396
COG function: function code K; Predicted transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14288; Mature: 14288
Theoretical pI: Translated: 8.75; Mature: 8.75
Prosite motif: PS50943 HTH_CROC1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDLYEKIKELAAQKHTSIRKIEEHLGYGNGTIRRWNKNKPNYDKIQAVAKYFNVSVDYLL CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCHHHHHHHHHHHCCHHHEEE GNEELKKTNKPVDLKKVISEKKPTSWDDPRIDWNEWVSFDGEPISDDVKKILFAIYGDKL CCHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHC TD CC >Mature Secondary Structure MDLYEKIKELAAQKHTSIRKIEEHLGYGNGTIRRWNKNKPNYDKIQAVAKYFNVSVDYLL CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCHHHHHHHHHHHCCHHHEEE GNEELKKTNKPVDLKKVISEKKPTSWDDPRIDWNEWVSFDGEPISDDVKKILFAIYGDKL CCHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHC TD CC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA