Definition | Lactococcus lactis subsp. lactis Il1403, complete genome. |
---|---|
Accession | NC_002662 |
Length | 2,365,589 |
Click here to switch to the map view.
The map label for this gene is yejJ
Identifier: 15672482
GI number: 15672482
Start: 500356
End: 501567
Strand: Direct
Name: yejJ
Synonym: L100350
Alternate gene names: 15672482
Gene position: 500356-501567 (Clockwise)
Preceding gene: 30024000
Following gene: 15672483
Centisome position: 21.15
GC content: 38.28
Gene sequence:
>1212_bases ATGACTAAGCGCTTAAAGAAAAAAGCAAAACCAGTTGTTTTTCTAGCTCTTGTTCTTGGTTGTGCATTAATTTTATCAGG AGTTCTTGGTTTGGCGGGACATTTAAACGAACAAGAATCGTCTAAAACAAAAAAGAAAAGTCAATTGTCAGAAACTAAAA GGAGTTCAACTTCCCCAAAAAATATGGATAAAAATATTGAGCAGATGACTTTGGAACAAAAAGTTGGTCAGTTATTTATG ACAGGAATGCCAGCAAATAACTATAATCAGGCAACTTTTGATGCGATTGAAAAGTATCAAGTAGGTAGTATTATTTTGAC TGGTCGCTCTAATCTCAGTGTCCCAGAAATGAAAGATATTACTGACAAACTACAAGGCTTAGAACCGGCTAATCGCAAAC TCTTGATATCCTGTGACCAAGAGGGAGGAAATGTTCAAGTTCTCCAAGGTCAGGGTTTTTCACAGATTCCTGATGGATTA ACTCAAGGAAGTTGGACAGCTGATAAATTACAAAAGGAATCACAAACTTGGGGAAGTGAACTTTACGCAGCTGGAGTGAA TTTTGACTTAGCACCAGTTGCTGACCAAGTTTTATCTGCCGACTTTGCTCCACAAAATGCTCCAATTGGCTATTGGAGTC GCCAATATGCTTATGATAAAGCAAGTATCATAAGCCATGCTCAAGCATTTACGGAAGGCATGAAAGCAGCCAAGGTTTTG ACAACTGCTAAACATTTTCCAGGGCTTGGAGCGGTGACAGGCAATACAGATATCAGTGCAGGTGTTAGAGATGACCAAAC GAATTCCAATAGCGAATCTGTTCAAATTTTCAAAGATTTAATCTCTTCTGGGACACCTTCGATTATGACCGCAACCGCTA TTTATGATAAAATTGACCCTAATCTTCCCGGTGCTTTTTCATCCAAAATGGTTGATGGTTTACTACGGAAACAATTAGGC TTTGATGGTTTGGTTATTACAGATGATTTATCAAATGCTGTCCAAGTACAATCATGGACGCCTGGTCAAAGGGCAGTTTT AGCATTGTCAGCAGGAAATGACCTTGTTTTAGCAAATGAGCCTACACAAATTCCAGAAATGATCTCAGAAGTTTTGCAAA AGGTAAAAGCAGACCCAGACTTTGCTAAAAAAATCAGTCAATCAGCCACAAGAGTGATTAAAGTAAAAGAAGAAATGAAA CTTGTAGAATAG
Upstream 100 bases:
>100_bases ATAACTTACTTTATACAGAAGACCATTTCCACCCAAATAACGTAGGTTATCAACTTATGGCTGATGCAGTATTTGCAAGT TATAAGGAGGTCAACCAAAA
Downstream 100 bases:
>100_bases AGAAGCAAAATGGAAAATAACGAAAATCAAACAAGAAAATCAAAAACAAAAAATTCCACTAAGCCAAAAACTGAAAAAGA AGAAGGCCTTAAAAAACGTC
Product: hypothetical protein
Products: NA
Alternate protein names: Beta-N-acetylhexosaminidase; N-acetyl-beta-glucosaminidase [H]
Number of amino acids: Translated: 403; Mature: 402
Protein sequence:
>403_residues MTKRLKKKAKPVVFLALVLGCALILSGVLGLAGHLNEQESSKTKKKSQLSETKRSSTSPKNMDKNIEQMTLEQKVGQLFM TGMPANNYNQATFDAIEKYQVGSIILTGRSNLSVPEMKDITDKLQGLEPANRKLLISCDQEGGNVQVLQGQGFSQIPDGL TQGSWTADKLQKESQTWGSELYAAGVNFDLAPVADQVLSADFAPQNAPIGYWSRQYAYDKASIISHAQAFTEGMKAAKVL TTAKHFPGLGAVTGNTDISAGVRDDQTNSNSESVQIFKDLISSGTPSIMTATAIYDKIDPNLPGAFSSKMVDGLLRKQLG FDGLVITDDLSNAVQVQSWTPGQRAVLALSAGNDLVLANEPTQIPEMISEVLQKVKADPDFAKKISQSATRVIKVKEEMK LVE
Sequences:
>Translated_403_residues MTKRLKKKAKPVVFLALVLGCALILSGVLGLAGHLNEQESSKTKKKSQLSETKRSSTSPKNMDKNIEQMTLEQKVGQLFM TGMPANNYNQATFDAIEKYQVGSIILTGRSNLSVPEMKDITDKLQGLEPANRKLLISCDQEGGNVQVLQGQGFSQIPDGL TQGSWTADKLQKESQTWGSELYAAGVNFDLAPVADQVLSADFAPQNAPIGYWSRQYAYDKASIISHAQAFTEGMKAAKVL TTAKHFPGLGAVTGNTDISAGVRDDQTNSNSESVQIFKDLISSGTPSIMTATAIYDKIDPNLPGAFSSKMVDGLLRKQLG FDGLVITDDLSNAVQVQSWTPGQRAVLALSAGNDLVLANEPTQIPEMISEVLQKVKADPDFAKKISQSATRVIKVKEEMK LVE >Mature_402_residues TKRLKKKAKPVVFLALVLGCALILSGVLGLAGHLNEQESSKTKKKSQLSETKRSSTSPKNMDKNIEQMTLEQKVGQLFMT GMPANNYNQATFDAIEKYQVGSIILTGRSNLSVPEMKDITDKLQGLEPANRKLLISCDQEGGNVQVLQGQGFSQIPDGLT QGSWTADKLQKESQTWGSELYAAGVNFDLAPVADQVLSADFAPQNAPIGYWSRQYAYDKASIISHAQAFTEGMKAAKVLT TAKHFPGLGAVTGNTDISAGVRDDQTNSNSESVQIFKDLISSGTPSIMTATAIYDKIDPNLPGAFSSKMVDGLLRKQLGF DGLVITDDLSNAVQVQSWTPGQRAVLALSAGNDLVLANEPTQIPEMISEVLQKVKADPDFAKKISQSATRVIKVKEEMKL VE
Specific function: Cleaves GlcNAc linked beta-1,4 to MurNAc tripeptides [H]
COG id: COG1472
COG function: function code G; Beta-glucosidase-related glycosidases
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 3 family. NagZ subfamily [H]
Homologues:
Organism=Escherichia coli, GI1787350, Length=269, Percent_Identity=30.1115241635688, Blast_Score=107, Evalue=2e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022956 - InterPro: IPR001764 - InterPro: IPR017853 [H]
Pfam domain/function: PF00933 Glyco_hydro_3 [H]
EC number: =3.2.1.52 [H]
Molecular weight: Translated: 43557; Mature: 43426
Theoretical pI: Translated: 7.50; Mature: 7.50
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00775 GLYCOSYL_HYDROL_F3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKRLKKKAKPVVFLALVLGCALILSGVLGLAGHLNEQESSKTKKKSQLSETKRSSTSPK CCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCC NMDKNIEQMTLEQKVGQLFMTGMPANNYNQATFDAIEKYQVGSIILTGRSNLSVPEMKDI HHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCCHHHHH TDKLQGLEPANRKLLISCDQEGGNVQVLQGQGFSQIPDGLTQGSWTADKLQKESQTWGSE HHHHHCCCCCCCEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH LYAAGVNFDLAPVADQVLSADFAPQNAPIGYWSRQYAYDKASIISHAQAFTEGMKAAKVL HEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH TTAKHFPGLGAVTGNTDISAGVRDDQTNSNSESVQIFKDLISSGTPSIMTATAIYDKIDP HHHHHCCCCCEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEHHHHHHHCCC NLPGAFSSKMVDGLLRKQLGFDGLVITDDLSNAVQVQSWTPGQRAVLALSAGNDLVLANE CCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCEEEECCCCCCCEEEEEECCCEEEEECC PTQIPEMISEVLQKVKADPDFAKKISQSATRVIKVKEEMKLVE CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TKRLKKKAKPVVFLALVLGCALILSGVLGLAGHLNEQESSKTKKKSQLSETKRSSTSPK CHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCC NMDKNIEQMTLEQKVGQLFMTGMPANNYNQATFDAIEKYQVGSIILTGRSNLSVPEMKDI HHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCCHHHHH TDKLQGLEPANRKLLISCDQEGGNVQVLQGQGFSQIPDGLTQGSWTADKLQKESQTWGSE HHHHHCCCCCCCEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH LYAAGVNFDLAPVADQVLSADFAPQNAPIGYWSRQYAYDKASIISHAQAFTEGMKAAKVL HEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH TTAKHFPGLGAVTGNTDISAGVRDDQTNSNSESVQIFKDLISSGTPSIMTATAIYDKIDP HHHHHCCCCCEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEHHHHHHHCCC NLPGAFSSKMVDGLLRKQLGFDGLVITDDLSNAVQVQSWTPGQRAVLALSAGNDLVLANE CCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCEEEECCCCCCCEEEEEECCCEEEEECC PTQIPEMISEVLQKVKADPDFAKKISQSATRVIKVKEEMKLVE CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA