Definition | Lactococcus lactis subsp. lactis Il1403, complete genome. |
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Accession | NC_002662 |
Length | 2,365,589 |
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The map label for this gene is yejH
Identifier: 15672480
GI number: 15672480
Start: 498649
End: 499506
Strand: Direct
Name: yejH
Synonym: L98583
Alternate gene names: 15672480
Gene position: 498649-499506 (Clockwise)
Preceding gene: 15672478
Following gene: 30024000
Centisome position: 21.08
GC content: 36.95
Gene sequence:
>858_bases ATGGGAGTTCAGATAGTAAATATGCCAATAAAAATTGTGACAGATTCATCCATTACGATTGAGCCAGGAATTGCTCGTGA ACTTGACATTACTATTGTTCCGTTGTCAGTAACGATCGATGGAACAATGTATTCAGACGACGACTTGAAGTTTGAAGATT TCATGGTCAAAATGGCTGCATCAAAAAACTTGCCTAAAACAAGTCAGCCACCAGTTGGTGTTTTTGCCGAGGTTTATGAA AAAATTGCTGCTGAGGATGATGAGATTATCTCCATTCATTTAACAGAAGCATTGTCAGGAACAGTAGAAGCAGCACGCCA AGGGGGAATGCTTTCAGGTCGTAACGTAACGGTCATTGATAGTGACTTTACTGACCAAGCACAAAAATTCCAAGTGGTTG AAGCAGCGCGCCTAGCAAAAGCAGGAGCATCTAAAGAAGAAATTTTAGAAAAAATTAAATATATTCGAGAAAATACAGAG CTTTTTATCGGATTTTCAACATTAGAAAATTTGGTTAAAGGTGGTCGTGTTAGTCGAATGACAGGACTATTTGGAAGTCT TTTACAAGTTCGCGTTATTGGAACTTTGAAAGACCGTGAATTGAATACTCTTTTACGTGGACGTGGAAGTAAAACTTTTT ATAAATGGCTTGAAGAACTTTCAGATTCTATTAGTAGTTCTGGACGTAAAATCCGTGAAATTGGAATTTCTCATGCTCAA GGTTTAGAATTTTCACAAAAAGCGAAAGAAGTTTTGCAAAAATTTGTTGAAAAACCTATTTCAATTTTAGATACCAACAC GACAATTGCCACTCATACAGGTCCTGGAGCTTGGGCAATTATGATTGATTATGAATGA
Upstream 100 bases:
>100_bases AACCTTTTTTGCTCTTTCCAACTGAAAATTTGTTATAATATATGATAGCACAAATTGTATAGAAAAGGAATTGGACTGCC GACTTTCTCTTATGAGAAAA
Downstream 100 bases:
>100_bases TAAATCTAAAAATATGATGAAAAATTTTATACGTACATTTGCCGGCTTGTTGCTGGCAATTTTGCTAATTTTGGGCTTCT TTTTGCTCGTTTTTCCAAAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 285; Mature: 284
Protein sequence:
>285_residues MGVQIVNMPIKIVTDSSITIEPGIARELDITIVPLSVTIDGTMYSDDDLKFEDFMVKMAASKNLPKTSQPPVGVFAEVYE KIAAEDDEIISIHLTEALSGTVEAARQGGMLSGRNVTVIDSDFTDQAQKFQVVEAARLAKAGASKEEILEKIKYIRENTE LFIGFSTLENLVKGGRVSRMTGLFGSLLQVRVIGTLKDRELNTLLRGRGSKTFYKWLEELSDSISSSGRKIREIGISHAQ GLEFSQKAKEVLQKFVEKPISILDTNTTIATHTGPGAWAIMIDYE
Sequences:
>Translated_285_residues MGVQIVNMPIKIVTDSSITIEPGIARELDITIVPLSVTIDGTMYSDDDLKFEDFMVKMAASKNLPKTSQPPVGVFAEVYE KIAAEDDEIISIHLTEALSGTVEAARQGGMLSGRNVTVIDSDFTDQAQKFQVVEAARLAKAGASKEEILEKIKYIRENTE LFIGFSTLENLVKGGRVSRMTGLFGSLLQVRVIGTLKDRELNTLLRGRGSKTFYKWLEELSDSISSSGRKIREIGISHAQ GLEFSQKAKEVLQKFVEKPISILDTNTTIATHTGPGAWAIMIDYE >Mature_284_residues GVQIVNMPIKIVTDSSITIEPGIARELDITIVPLSVTIDGTMYSDDDLKFEDFMVKMAASKNLPKTSQPPVGVFAEVYEK IAAEDDEIISIHLTEALSGTVEAARQGGMLSGRNVTVIDSDFTDQAQKFQVVEAARLAKAGASKEEILEKIKYIRENTEL FIGFSTLENLVKGGRVSRMTGLFGSLLQVRVIGTLKDRELNTLLRGRGSKTFYKWLEELSDSISSSGRKIREIGISHAQG LEFSQKAKEVLQKFVEKPISILDTNTTIATHTGPGAWAIMIDYE
Specific function: Unknown
COG id: COG1307
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 DegV domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003797 [H]
Pfam domain/function: PF02645 DegV [H]
EC number: NA
Molecular weight: Translated: 31347; Mature: 31216
Theoretical pI: Translated: 4.98; Mature: 4.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGVQIVNMPIKIVTDSSITIEPGIARELDITIVPLSVTIDGTMYSDDDLKFEDFMVKMAA CCEEEEECCEEEEECCCEEECCCCCCEEEEEEEEEEEEECCEEECCCCCCHHHHHHHHHH SKNLPKTSQPPVGVFAEVYEKIAAEDDEIISIHLTEALSGTVEAARQGGMLSGRNVTVID CCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHCCCCCCCCEEEEEE SDFTDQAQKFQVVEAARLAKAGASKEEILEKIKYIRENTELFIGFSTLENLVKGGRVSRM CCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCEEEEEHHHHHHHHCCCCHHHH TGLFGSLLQVRVIGTLKDRELNTLLRGRGSKTFYKWLEELSDSISSSGRKIREIGISHAQ HHHHHHHHHHHEEECCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHCCCHHC GLEFSQKAKEVLQKFVEKPISILDTNTTIATHTGPGAWAIMIDYE CCCHHHHHHHHHHHHHHCCHHEEECCCEEEEECCCCEEEEEEECC >Mature Secondary Structure GVQIVNMPIKIVTDSSITIEPGIARELDITIVPLSVTIDGTMYSDDDLKFEDFMVKMAA CEEEEECCEEEEECCCEEECCCCCCEEEEEEEEEEEEECCEEECCCCCCHHHHHHHHHH SKNLPKTSQPPVGVFAEVYEKIAAEDDEIISIHLTEALSGTVEAARQGGMLSGRNVTVID CCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHCCCCCCCCEEEEEE SDFTDQAQKFQVVEAARLAKAGASKEEILEKIKYIRENTELFIGFSTLENLVKGGRVSRM CCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCEEEEEHHHHHHHHCCCCHHHH TGLFGSLLQVRVIGTLKDRELNTLLRGRGSKTFYKWLEELSDSISSSGRKIREIGISHAQ HHHHHHHHHHHEEECCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHCCCHHC GLEFSQKAKEVLQKFVEKPISILDTNTTIATHTGPGAWAIMIDYE CCCHHHHHHHHHHHHHHCCHHEEECCCEEEEECCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11337471 [H]