Definition | Lactococcus lactis subsp. lactis Il1403, complete genome. |
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Accession | NC_002662 |
Length | 2,365,589 |
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The map label for this gene is yejD
Identifier: 15672475
GI number: 15672475
Start: 492452
End: 492931
Strand: Reverse
Name: yejD
Synonym: L92464
Alternate gene names: NA
Gene position: 492931-492452 (Counterclockwise)
Preceding gene: 15672476
Following gene: 15672474
Centisome position: 20.84
GC content: 35.0
Gene sequence:
>480_bases TTGAACAAGTTGTTTAATCAAGCAGTTAACGTTTACCTTGCCGCACCATTTTTTAGTGAAAGTCAAATAAAAAAAGTTGA ACTTTTAGAAAATGCACTTTCAAAAAATAAAACAGTAGCAAACTTTTTTAGCCCAATGAGATGTCAACATCCTGAATCTT TACCACAAGAAGTTGAAGCTTTTACCCCTGAATGGGCCAAAGCGACAATGGAAAATGATGTAAATGAGGTAAATAAAGCA GATATCATCGTTGCAATTGTTGATTTCGATCATCAAGATACTGATTCTGGAACAGCTTGGGAGCTTGGCTACGCCATCGC TTTAGAAAAACCAACCTATCTTATTCGTTTTGAAGATACTATTCCAGCAAATATAATGCTCACTGAGCGAAATAGAGCTT TCTTCACCCAGATTGAACAAGTTGAAGAATATGATTTTTTAGAGTCTAAACTAATCCCATATAGTGGAAAATACCAGTAG
Upstream 100 bases:
>100_bases TTGCAACTTAAGGAAGGAATGATTTCTAAAGAAGTCATAGATGCCATTTCTCTTGTTGATACCGCCGAAGAAACCATAGA ATTATTAGGAGATTTGAAAC
Downstream 100 bases:
>100_bases TAAAGAGATAAGTACCTGCTTATTTTTATCTGCTCCTTTATATATAAAATTTGAAATTTGTCATAATTTGTACTATACTA TAGGCGGATAGAAAATAATG
Product: hypothetical protein
Products: NA
Alternate protein names: Nucleoside 2-Deoxyribosyltransferase; Purine Deoxyribosyltransferase; Purine Trans Deoxyribosylase; 2-Deoxyribosyltransferase; Nucleotide Deoxyribosyltransferase
Number of amino acids: Translated: 159; Mature: 159
Protein sequence:
>159_residues MNKLFNQAVNVYLAAPFFSESQIKKVELLENALSKNKTVANFFSPMRCQHPESLPQEVEAFTPEWAKATMENDVNEVNKA DIIVAIVDFDHQDTDSGTAWELGYAIALEKPTYLIRFEDTIPANIMLTERNRAFFTQIEQVEEYDFLESKLIPYSGKYQ
Sequences:
>Translated_159_residues MNKLFNQAVNVYLAAPFFSESQIKKVELLENALSKNKTVANFFSPMRCQHPESLPQEVEAFTPEWAKATMENDVNEVNKA DIIVAIVDFDHQDTDSGTAWELGYAIALEKPTYLIRFEDTIPANIMLTERNRAFFTQIEQVEEYDFLESKLIPYSGKYQ >Mature_159_residues MNKLFNQAVNVYLAAPFFSESQIKKVELLENALSKNKTVANFFSPMRCQHPESLPQEVEAFTPEWAKATMENDVNEVNKA DIIVAIVDFDHQDTDSGTAWELGYAIALEKPTYLIRFEDTIPANIMLTERNRAFFTQIEQVEEYDFLESKLIPYSGKYQ
Specific function: Unknown
COG id: COG3613
COG function: function code F; Nucleoside 2-deoxyribosyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18295; Mature: 18295
Theoretical pI: Translated: 4.30; Mature: 4.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKLFNQAVNVYLAAPFFSESQIKKVELLENALSKNKTVANFFSPMRCQHPESLPQEVEA CCHHHHHHHEEEEECCCCCCHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCHHHHHH FTPEWAKATMENDVNEVNKADIIVAIVDFDHQDTDSGTAWELGYAIALEKPTYLIRFEDT CCCHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCEEEEEEEEEECCCEEEEEECCC IPANIMLTERNRAFFTQIEQVEEYDFLESKLIPYSGKYQ CCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MNKLFNQAVNVYLAAPFFSESQIKKVELLENALSKNKTVANFFSPMRCQHPESLPQEVEA CCHHHHHHHEEEEECCCCCCHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCHHHHHH FTPEWAKATMENDVNEVNKADIIVAIVDFDHQDTDSGTAWELGYAIALEKPTYLIRFEDT CCCHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCEEEEEEEEEECCCEEEEEECCC IPANIMLTERNRAFFTQIEQVEEYDFLESKLIPYSGKYQ CCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA