Definition Lactococcus lactis subsp. lactis Il1403, complete genome.
Accession NC_002662
Length 2,365,589

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The map label for this gene is yejD

Identifier: 15672475

GI number: 15672475

Start: 492452

End: 492931

Strand: Reverse

Name: yejD

Synonym: L92464

Alternate gene names: NA

Gene position: 492931-492452 (Counterclockwise)

Preceding gene: 15672476

Following gene: 15672474

Centisome position: 20.84

GC content: 35.0

Gene sequence:

>480_bases
TTGAACAAGTTGTTTAATCAAGCAGTTAACGTTTACCTTGCCGCACCATTTTTTAGTGAAAGTCAAATAAAAAAAGTTGA
ACTTTTAGAAAATGCACTTTCAAAAAATAAAACAGTAGCAAACTTTTTTAGCCCAATGAGATGTCAACATCCTGAATCTT
TACCACAAGAAGTTGAAGCTTTTACCCCTGAATGGGCCAAAGCGACAATGGAAAATGATGTAAATGAGGTAAATAAAGCA
GATATCATCGTTGCAATTGTTGATTTCGATCATCAAGATACTGATTCTGGAACAGCTTGGGAGCTTGGCTACGCCATCGC
TTTAGAAAAACCAACCTATCTTATTCGTTTTGAAGATACTATTCCAGCAAATATAATGCTCACTGAGCGAAATAGAGCTT
TCTTCACCCAGATTGAACAAGTTGAAGAATATGATTTTTTAGAGTCTAAACTAATCCCATATAGTGGAAAATACCAGTAG

Upstream 100 bases:

>100_bases
TTGCAACTTAAGGAAGGAATGATTTCTAAAGAAGTCATAGATGCCATTTCTCTTGTTGATACCGCCGAAGAAACCATAGA
ATTATTAGGAGATTTGAAAC

Downstream 100 bases:

>100_bases
TAAAGAGATAAGTACCTGCTTATTTTTATCTGCTCCTTTATATATAAAATTTGAAATTTGTCATAATTTGTACTATACTA
TAGGCGGATAGAAAATAATG

Product: hypothetical protein

Products: NA

Alternate protein names: Nucleoside 2-Deoxyribosyltransferase; Purine Deoxyribosyltransferase; Purine Trans Deoxyribosylase; 2-Deoxyribosyltransferase; Nucleotide Deoxyribosyltransferase

Number of amino acids: Translated: 159; Mature: 159

Protein sequence:

>159_residues
MNKLFNQAVNVYLAAPFFSESQIKKVELLENALSKNKTVANFFSPMRCQHPESLPQEVEAFTPEWAKATMENDVNEVNKA
DIIVAIVDFDHQDTDSGTAWELGYAIALEKPTYLIRFEDTIPANIMLTERNRAFFTQIEQVEEYDFLESKLIPYSGKYQ

Sequences:

>Translated_159_residues
MNKLFNQAVNVYLAAPFFSESQIKKVELLENALSKNKTVANFFSPMRCQHPESLPQEVEAFTPEWAKATMENDVNEVNKA
DIIVAIVDFDHQDTDSGTAWELGYAIALEKPTYLIRFEDTIPANIMLTERNRAFFTQIEQVEEYDFLESKLIPYSGKYQ
>Mature_159_residues
MNKLFNQAVNVYLAAPFFSESQIKKVELLENALSKNKTVANFFSPMRCQHPESLPQEVEAFTPEWAKATMENDVNEVNKA
DIIVAIVDFDHQDTDSGTAWELGYAIALEKPTYLIRFEDTIPANIMLTERNRAFFTQIEQVEEYDFLESKLIPYSGKYQ

Specific function: Unknown

COG id: COG3613

COG function: function code F; Nucleoside 2-deoxyribosyltransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18295; Mature: 18295

Theoretical pI: Translated: 4.30; Mature: 4.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKLFNQAVNVYLAAPFFSESQIKKVELLENALSKNKTVANFFSPMRCQHPESLPQEVEA
CCHHHHHHHEEEEECCCCCCHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCHHHHHH
FTPEWAKATMENDVNEVNKADIIVAIVDFDHQDTDSGTAWELGYAIALEKPTYLIRFEDT
CCCHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCEEEEEEEEEECCCEEEEEECCC
IPANIMLTERNRAFFTQIEQVEEYDFLESKLIPYSGKYQ
CCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MNKLFNQAVNVYLAAPFFSESQIKKVELLENALSKNKTVANFFSPMRCQHPESLPQEVEA
CCHHHHHHHEEEEECCCCCCHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCHHHHHH
FTPEWAKATMENDVNEVNKADIIVAIVDFDHQDTDSGTAWELGYAIALEKPTYLIRFEDT
CCCHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCEEEEEEEEEECCCEEEEEECCC
IPANIMLTERNRAFFTQIEQVEEYDFLESKLIPYSGKYQ
CCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA