Definition | Lactococcus lactis subsp. lactis Il1403, complete genome. |
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Accession | NC_002662 |
Length | 2,365,589 |
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The map label for this gene is pyrG
Identifier: 15672473
GI number: 15672473
Start: 488243
End: 489850
Strand: Direct
Name: pyrG
Synonym: L88252
Alternate gene names: 15672473
Gene position: 488243-489850 (Clockwise)
Preceding gene: 15672472
Following gene: 15672478
Centisome position: 20.64
GC content: 40.11
Gene sequence:
>1608_bases ATGTCAACTAAGTATATTTTCGTCACTGGTGGTGGTACTTCGTCAATGGGTAAAGGGATCGTAGCGGCATCGCTCGGTCG TTTGCTTAAAAATCGTGGGCTTAAAGTCACTGTCCAAAAATTTGACCCATACCTTAACATCGACCCAGGGACAATGAGCC CTTATCAACATGGTGAAGTCTTTGTTACTGATGATGGTGCTGAAACTGACCTTGACCTTGGTCACTATGAACGTTTCATT GACATCAATTTAAATAAATATTCAAATGTTACTTCCGGTAAAGTTTACAGTGAGATTCTTCGTAAAGAACGTAAGGGAGA ATATCTCGGAGCAACTGTCCAAATGGTACCGCATGTGACTAACATGTTGAAAGAAAAAATTAAACGTGCAGCAACAACAA CTGATGCAGATATCATTATCACAGAAGTTGGTGGAACGGTTGGCGATATGGAAAGTTTGCCATTTATTGAAGCTTTACGC CAAATGAAAGCCGAAGTTGGTGCGGACAACGTCATGTACATTCACACTGTTCCAATTCTTCACTTGCGTGCTGCTGGAGA ATTGAAAACTAAAATCGCCCAAAATGCGACTAAGACACTTCGTGAATATGGTATCCAAGCTAACATGCTCGTATTACGTA GTGAAGTTCCAATCACGACAGAAATGCGTGATAAAATTGCGATGTTCTGTGACGTAGCACCAGAAGCAGTCATTCAATCG CTTGATGTTGAACACTTATACCAAATTCCATTGAACCTTCAAGCACAAAATATGGACCAAATCGTTTGTGACCATTTAAA ACTTGATGCACCAAAAGCAGATATGACAGAATGGTCAGCAATGGTTGACCATGTCATGAACCTCAAGAAAAAAGTAAAAA TTGCTTTGGTTGGTAAATATGTAGAATTACCAGATGCTTATATTTCAGTGACTGAAGCGCTTAAACATGCAGGTTATTCA TCTGATGCCGAAGTTGATATTAACTGGGTTAATGCTAATGATGTAACTGATGAAAATGTTGCTGAACTTGTTGGTGATGC TGCAGGAATTATTGTTCCTGGAGGATTTGGTCATCGTGGCACAGAAGGTAAGATTGCAGCTATTAAATATGCGCGTGAAA ATGACGTTCCAATGCTTGGAATCTGTCTTGGAATGCAATTGACAGCAGTTGAATTCGCTCGTAATGTTCTTGGACTTGAA GGAGCTCATTCATTTGAATTAGACCCTGAAACAAAATATCCAGTCATTGACATTATGCGTGACCAAGTTGATGTTGAAGA CATGGGTGGAACACTACGTCTTGGACTTTACCCAGCTAAATTGAAAAATGGCTCACGCGCTAAAGCAGCCTACAATGATG CTGAAGTGGTTCAACGTCGCCACCGTCACCGTTATGAATTCAATAACAAATTCCGCGAAGACTTTGAAAAAGCTGGTTTC GTATTCTCAGGCGTTTCACCAGATAACCGTTTGGTTGAAATCGTTGAACTTTCTGATAAAAAATTCTTCGTGGCATGTCA ATATCACCCAGAATTGCAATCACGTCCAAACCGTCCAGAAGAACTCTACACAGAATTTATTCGTGTAGCGGTTGAAAATA GTAAATAA
Upstream 100 bases:
>100_bases TTTTATTATAAAAAATCAGTACCGGTAGGCTCCCCTCTGGGGAGCTGTTTTTGTTTTTCCCAGTTATTTCTGTTTTGTAA AAAGATTAGAGGAGATTTAG
Downstream 100 bases:
>100_bases TATAGGCTAAAAAACCTCCGAGATTAGGAGGTTTTTTATTTGTTTTAAATAATCAGAATATTTAAACATAGCTTGTTTTC CCATACTTTTTGTATTATAA
Product: CTP synthetase
Products: NA
Alternate protein names: CTP synthetase; UTP--ammonia ligase
Number of amino acids: Translated: 535; Mature: 534
Protein sequence:
>535_residues MSTKYIFVTGGGTSSMGKGIVAASLGRLLKNRGLKVTVQKFDPYLNIDPGTMSPYQHGEVFVTDDGAETDLDLGHYERFI DINLNKYSNVTSGKVYSEILRKERKGEYLGATVQMVPHVTNMLKEKIKRAATTTDADIIITEVGGTVGDMESLPFIEALR QMKAEVGADNVMYIHTVPILHLRAAGELKTKIAQNATKTLREYGIQANMLVLRSEVPITTEMRDKIAMFCDVAPEAVIQS LDVEHLYQIPLNLQAQNMDQIVCDHLKLDAPKADMTEWSAMVDHVMNLKKKVKIALVGKYVELPDAYISVTEALKHAGYS SDAEVDINWVNANDVTDENVAELVGDAAGIIVPGGFGHRGTEGKIAAIKYARENDVPMLGICLGMQLTAVEFARNVLGLE GAHSFELDPETKYPVIDIMRDQVDVEDMGGTLRLGLYPAKLKNGSRAKAAYNDAEVVQRRHRHRYEFNNKFREDFEKAGF VFSGVSPDNRLVEIVELSDKKFFVACQYHPELQSRPNRPEELYTEFIRVAVENSK
Sequences:
>Translated_535_residues MSTKYIFVTGGGTSSMGKGIVAASLGRLLKNRGLKVTVQKFDPYLNIDPGTMSPYQHGEVFVTDDGAETDLDLGHYERFI DINLNKYSNVTSGKVYSEILRKERKGEYLGATVQMVPHVTNMLKEKIKRAATTTDADIIITEVGGTVGDMESLPFIEALR QMKAEVGADNVMYIHTVPILHLRAAGELKTKIAQNATKTLREYGIQANMLVLRSEVPITTEMRDKIAMFCDVAPEAVIQS LDVEHLYQIPLNLQAQNMDQIVCDHLKLDAPKADMTEWSAMVDHVMNLKKKVKIALVGKYVELPDAYISVTEALKHAGYS SDAEVDINWVNANDVTDENVAELVGDAAGIIVPGGFGHRGTEGKIAAIKYARENDVPMLGICLGMQLTAVEFARNVLGLE GAHSFELDPETKYPVIDIMRDQVDVEDMGGTLRLGLYPAKLKNGSRAKAAYNDAEVVQRRHRHRYEFNNKFREDFEKAGF VFSGVSPDNRLVEIVELSDKKFFVACQYHPELQSRPNRPEELYTEFIRVAVENSK >Mature_534_residues STKYIFVTGGGTSSMGKGIVAASLGRLLKNRGLKVTVQKFDPYLNIDPGTMSPYQHGEVFVTDDGAETDLDLGHYERFID INLNKYSNVTSGKVYSEILRKERKGEYLGATVQMVPHVTNMLKEKIKRAATTTDADIIITEVGGTVGDMESLPFIEALRQ MKAEVGADNVMYIHTVPILHLRAAGELKTKIAQNATKTLREYGIQANMLVLRSEVPITTEMRDKIAMFCDVAPEAVIQSL DVEHLYQIPLNLQAQNMDQIVCDHLKLDAPKADMTEWSAMVDHVMNLKKKVKIALVGKYVELPDAYISVTEALKHAGYSS DAEVDINWVNANDVTDENVAELVGDAAGIIVPGGFGHRGTEGKIAAIKYARENDVPMLGICLGMQLTAVEFARNVLGLEG AHSFELDPETKYPVIDIMRDQVDVEDMGGTLRLGLYPAKLKNGSRAKAAYNDAEVVQRRHRHRYEFNNKFREDFEKAGFV FSGVSPDNRLVEIVELSDKKFFVACQYHPELQSRPNRPEELYTEFIRVAVENSK
Specific function: Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen
COG id: COG0504
COG function: function code F; CTP synthase (UTP-ammonia lyase)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 glutamine amidotransferase type-1 domain
Homologues:
Organism=Homo sapiens, GI148491070, Length=551, Percent_Identity=44.464609800363, Blast_Score=466, Evalue=1e-131, Organism=Homo sapiens, GI28559085, Length=550, Percent_Identity=42.1818181818182, Blast_Score=452, Evalue=1e-127, Organism=Homo sapiens, GI28559083, Length=550, Percent_Identity=42.1818181818182, Blast_Score=452, Evalue=1e-127, Organism=Homo sapiens, GI221316689, Length=550, Percent_Identity=42.1818181818182, Blast_Score=452, Evalue=1e-127, Organism=Escherichia coli, GI1789142, Length=545, Percent_Identity=48.0733944954128, Blast_Score=526, Evalue=1e-150, Organism=Caenorhabditis elegans, GI25148299, Length=589, Percent_Identity=37.8607809847199, Blast_Score=399, Evalue=1e-111, Organism=Saccharomyces cerevisiae, GI6319432, Length=556, Percent_Identity=44.2446043165468, Blast_Score=463, Evalue=1e-131, Organism=Saccharomyces cerevisiae, GI6322563, Length=553, Percent_Identity=44.8462929475588, Blast_Score=455, Evalue=1e-129, Organism=Drosophila melanogaster, GI24664469, Length=549, Percent_Identity=41.8943533697632, Blast_Score=451, Evalue=1e-127, Organism=Drosophila melanogaster, GI21357815, Length=494, Percent_Identity=39.4736842105263, Blast_Score=379, Evalue=1e-105,
Paralogues:
None
Copy number: 480 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): PYRG_LACLA (Q9CI75)
Other databases:
- EMBL: AE005176 - PIR: C86686 - RefSeq: NP_266647.1 - ProteinModelPortal: Q9CI75 - SMR: Q9CI75 - GeneID: 1114109 - GenomeReviews: AE005176_GR - KEGG: lla:L88252 - NMPDR: fig|272623.1.peg.506 - HOGENOM: HBG597806 - OMA: RVTMQKL - ProtClustDB: PRK05380 - BioCyc: LLAC272623:L88252-MONOMER - BRENDA: 6.3.4.2 - HAMAP: MF_01227 - InterPro: IPR004468 - InterPro: IPR017456 - InterPro: IPR017926 - InterPro: IPR000991 - TIGRFAMs: TIGR00337
Pfam domain/function: PF06418 CTP_synth_N; PF00117 GATase
EC number: =6.3.4.2
Molecular weight: Translated: 59553; Mature: 59422
Theoretical pI: Translated: 5.65; Mature: 5.65
Prosite motif: PS51273 GATASE_TYPE_1
Important sites: ACT_SITE 382-382 ACT_SITE 509-509 ACT_SITE 511-511
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTKYIFVTGGGTSSMGKGIVAASLGRLLKNRGLKVTVQKFDPYLNIDPGTMSPYQHGEV CCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCEEECCCCCCCCCCCCEE FVTDDGAETDLDLGHYERFIDINLNKYSNVTSGKVYSEILRKERKGEYLGATVQMVPHVT EEECCCCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHH NMLKEKIKRAATTTDADIIITEVGGTVGDMESLPFIEALRQMKAEVGADNVMYIHTVPIL HHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEECEE HLRAAGELKTKIAQNATKTLREYGIQANMLVLRSEVPITTEMRDKIAMFCDVAPEAVIQS EEECCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHCCCHHHHHHH LDVEHLYQIPLNLQAQNMDQIVCDHLKLDAPKADMTEWSAMVDHVMNLKKKVKIALVGKY CCHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHEEEEEEECH VELPDAYISVTEALKHAGYSSDAEVDINWVNANDVTDENVAELVGDAAGIIVPGGFGHRG HHCCHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCHHHHHHHHCCCCCEEECCCCCCCC TEGKIAAIKYARENDVPMLGICLGMQLTAVEFARNVLGLEGAHSFELDPETKYPVIDIMR CCCCEEEEEEECCCCCCEEEEHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHH DQVDVEDMGGTLRLGLYPAKLKNGSRAKAAYNDAEVVQRRHRHRYEFNNKFREDFEKAGF CCCCHHHCCCEEEEEEEHHHCCCCCCCHHCCCHHHHHHHHHHHCCHHCHHHHHHHHHCCE VFSGVSPDNRLVEIVELSDKKFFVACQYHPELQSRPNRPEELYTEFIRVAVENSK EEECCCCCCCEEEEEEECCCEEEEEEEECCHHHCCCCCHHHHHHHHHHHHCCCCC >Mature Secondary Structure STKYIFVTGGGTSSMGKGIVAASLGRLLKNRGLKVTVQKFDPYLNIDPGTMSPYQHGEV CCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCEEECCCCCCCCCCCCEE FVTDDGAETDLDLGHYERFIDINLNKYSNVTSGKVYSEILRKERKGEYLGATVQMVPHVT EEECCCCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHH NMLKEKIKRAATTTDADIIITEVGGTVGDMESLPFIEALRQMKAEVGADNVMYIHTVPIL HHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEECEE HLRAAGELKTKIAQNATKTLREYGIQANMLVLRSEVPITTEMRDKIAMFCDVAPEAVIQS EEECCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHCCCHHHHHHH LDVEHLYQIPLNLQAQNMDQIVCDHLKLDAPKADMTEWSAMVDHVMNLKKKVKIALVGKY CCHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHEEEEEEECH VELPDAYISVTEALKHAGYSSDAEVDINWVNANDVTDENVAELVGDAAGIIVPGGFGHRG HHCCHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCHHHHHHHHCCCCCEEECCCCCCCC TEGKIAAIKYARENDVPMLGICLGMQLTAVEFARNVLGLEGAHSFELDPETKYPVIDIMR CCCCEEEEEEECCCCCCEEEEHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHH DQVDVEDMGGTLRLGLYPAKLKNGSRAKAAYNDAEVVQRRHRHRYEFNNKFREDFEKAGF CCCCHHHCCCEEEEEEEHHHCCCCCCCHHCCCHHHHHHHHHHHCCHHCHHHHHHHHHCCE VFSGVSPDNRLVEIVELSDKKFFVACQYHPELQSRPNRPEELYTEFIRVAVENSK EEECCCCCCCEEEEEEECCCEEEEEEEECCHHHCCCCCHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11337471