Definition | Lactococcus lactis subsp. lactis Il1403, complete genome. |
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Accession | NC_002662 |
Length | 2,365,589 |
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The map label for this gene is pi142
Identifier: 15672459
GI number: 15672459
Start: 470964
End: 471569
Strand: Direct
Name: pi142
Synonym: L70961
Alternate gene names: NA
Gene position: 470964-471569 (Clockwise)
Preceding gene: 15672458
Following gene: 15672460
Centisome position: 19.91
GC content: 36.47
Gene sequence:
>606_bases ATGACAATTGTAGGTTTAAAAAAAACTTATCTTGGATTAATTGATAAAAAAACAGGCAAAATTATTGCAGGTCCTGAAGG GCTAACAACAGATGGACTTTATATGTCAAATCCGAAAGATTTAGGTACAGCTTCTGCAAATATCACTAATATTGCAGCTG CTGGTACTCAAAAATTTGGAGACAACGGTCTTGTTGATGTAGTGAGTTCAAAATCATTTCCGCAAGTCGCTGCAGTTTGG AACAATCTTCCTTTTGATATTAAAGCTAAAATTAAAGGAGAAGTAAGCGACAAAAAAGGCGGATACGTTCAATCACAAGA TTTGCCACAAGTTGCTTTGATTATTGAGTCAGAGTTAATTGATCGTTCACATTCAATTTTTTACGCATTCGGTAATGGCC ATATGACTGAAACTGCATTGAACATTCAAACTGACAATGCAGCGCAAAACCGAGTTGAAGATGCATTGACTTATCAATCA CTGGCTTTTGAGGCATGGAATAATCAAGGAATGAAAACTTTCAATTCTGCAGATTCTGGATTCGATAAAACGGCAATGCT AAAAGAAGTTATGGGAGGATATGCTGCTAGTGGACTCGGAGTTTAA
Upstream 100 bases:
>100_bases CATTACCTAGACGTTAGTACCAATACAACAAAACAACAAACTAAAAAAAATATCACAGTTGAAAAAATTGTGGAAATTAA TGAATTAAAAGGAGAATAAA
Downstream 100 bases:
>100_bases TTAAACAGTGCGGGATGATTACATCCCGCTTTTTTATTTATAAAATATTGGAGAAAAACATGGAAATTAAAATCAAAAAA CTTAAAAAAACCGTTGAAGT
Product: small major structural protein
Products: NA
Alternate protein names: Small Protein; Tail Protein; Phage Tail Component; Phage-Related Tail Protein
Number of amino acids: Translated: 201; Mature: 200
Protein sequence:
>201_residues MTIVGLKKTYLGLIDKKTGKIIAGPEGLTTDGLYMSNPKDLGTASANITNIAAAGTQKFGDNGLVDVVSSKSFPQVAAVW NNLPFDIKAKIKGEVSDKKGGYVQSQDLPQVALIIESELIDRSHSIFYAFGNGHMTETALNIQTDNAAQNRVEDALTYQS LAFEAWNNQGMKTFNSADSGFDKTAMLKEVMGGYAASGLGV
Sequences:
>Translated_201_residues MTIVGLKKTYLGLIDKKTGKIIAGPEGLTTDGLYMSNPKDLGTASANITNIAAAGTQKFGDNGLVDVVSSKSFPQVAAVW NNLPFDIKAKIKGEVSDKKGGYVQSQDLPQVALIIESELIDRSHSIFYAFGNGHMTETALNIQTDNAAQNRVEDALTYQS LAFEAWNNQGMKTFNSADSGFDKTAMLKEVMGGYAASGLGV >Mature_200_residues TIVGLKKTYLGLIDKKTGKIIAGPEGLTTDGLYMSNPKDLGTASANITNIAAAGTQKFGDNGLVDVVSSKSFPQVAAVWN NLPFDIKAKIKGEVSDKKGGYVQSQDLPQVALIIESELIDRSHSIFYAFGNGHMTETALNIQTDNAAQNRVEDALTYQSL AFEAWNNQGMKTFNSADSGFDKTAMLKEVMGGYAASGLGV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21419; Mature: 21288
Theoretical pI: Translated: 5.25; Mature: 5.25
Prosite motif: PS00019 ACTININ_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIVGLKKTYLGLIDKKTGKIIAGPEGLTTDGLYMSNPKDLGTASANITNIAAAGTQKFG CEEECCHHHHHHHEECCCCCEEECCCCCCCCCEEECCCCCCCCCCCCCEEEECCCCCCCC DNGLVDVVSSKSFPQVAAVWNNLPFDIKAKIKGEVSDKKGGYVQSQDLPQVALIIESELI CCCCEEEECCCCCCHHHHHHCCCCEEEEEEEECCCCCCCCCEECCCCCCEEEEEEHHHHH DRSHSIFYAFGNGHMTETALNIQTDNAAQNRVEDALTYQSLAFEAWNNQGMKTFNSADSG CCCCEEEEEECCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCC FDKTAMLKEVMGGYAASGLGV CCHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure TIVGLKKTYLGLIDKKTGKIIAGPEGLTTDGLYMSNPKDLGTASANITNIAAAGTQKFG EEECCHHHHHHHEECCCCCEEECCCCCCCCCEEECCCCCCCCCCCCCEEEECCCCCCCC DNGLVDVVSSKSFPQVAAVWNNLPFDIKAKIKGEVSDKKGGYVQSQDLPQVALIIESELI CCCCEEEECCCCCCHHHHHHCCCCEEEEEEEECCCCCCCCCEECCCCCCEEEEEEHHHHH DRSHSIFYAFGNGHMTETALNIQTDNAAQNRVEDALTYQSLAFEAWNNQGMKTFNSADSG CCCCEEEEEECCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCC FDKTAMLKEVMGGYAASGLGV CCHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA