Definition | Lactococcus lactis subsp. lactis Il1403, complete genome. |
---|---|
Accession | NC_002662 |
Length | 2,365,589 |
Click here to switch to the map view.
The map label for this gene is yeeG
Identifier: 15672417
GI number: 15672417
Start: 445619
End: 447004
Strand: Direct
Name: yeeG
Synonym: L45616
Alternate gene names: 15672417
Gene position: 445619-447004 (Clockwise)
Preceding gene: 15672416
Following gene: 15672421
Centisome position: 18.84
GC content: 37.3
Gene sequence:
>1386_bases ATGAAGCTTTGGATAAAAACACTTCTCATGCTTGGAAGTATTATTTTAGTAACGGCAATTGCTGCAGGCGGATATACATT AACCGTTCTGAACAGTACAACAAAAGCCTTTAAAATGACTTACACTAATGCTGGGAATAAAAAGACAGAACAAGTCATTC AGGCAACTGAACCTCTAACAATCCTACTTATGGGGGTTGACACAGGAGGCGAAGGGCGTGGAACTTCCGATTCATGGAAT GGGAATTCTGACTCACAAATTCTGATGACGCTTAATCCTAAAACGCACACGACAACAATGGTTTCAATTGAACGTGATAC GATGACTAACATTTTAGATGCTGACGGAAACATTGTTTCTAAGCAAAAAATGAATGCAGCATATCCCTTAGGTTATAACT CAGGGTCATCTTCTGACGGTTTAAAAAATGCCGTAAGTTATGCTATGAAAACTATTAGTGCTCAGACTGGTATTAATATT GACAGTTTTGTAACAGTCAATTTTGATGGGCTAGTCAATATGGTTGATAATGTTGGTGGGATTGATATTAACAATACCAC AGGCCAAACTCTCTATATTTCAGATACAGAGCCGCAATATACTGCGAAAGTTCCACCTGGAAAACAACATATTAATGGTG ACCAAGCCTTAGTTTATACCCGTGACCGACATCATTTATCAAATGGTGACTATGGTCGGGCAGCTCACCAACGTGAAGTC ATTGCAGCACTCATGAAGAAAATTTTAGCCTTAGATAATATCACACGCTATGAACAATTTTTGAATGAAGCCTCAAAAGA TTTTAGAACTAATATCCCAATTAATGCTTCAACAATTACTTCATTACTAGGTTATAAAGATTGCTTTAACAAAGTAGTTT CTATTCAATATGAAGGCGTTGGTGAAATGGTTGATGGTGCTTCTTATCAATTTATGCCAACAGATATTTATCTCGCGATG CAAAATATCATGAAGAAATCGCTTGATGAATCAACAGTGACCACTTTGCCAAGCAGTTTGATTACTTATGAATCAGTTTT TGGCTCAGGAACAGCACCTTTTTATTATCTTCCGTCAGCTACTGTAACTGAAAAAGGAAAATCAACGGTGACTTATGGTG TTGATACGCAAGGAAATCTTGTTTCTTTGAATTCTAAAAATTCAGGGAATTATGTTTCGACAAGTGGTGGCTCAGTTCAA TCAGATTCAAGTTCGGGCTCCTCTAGCTCATCAAGTGATTCCACGGCAACCTCAAGTTCTGATTCTACTTATCAACAAGA TAATACTTACAATGATGGCTATAATAATAGTAATGACAGTACAACATCTAGCTATGGAACAGATGATACAAACACAGGGA ACTATGGCTACGGTACAAGTCAATAA
Upstream 100 bases:
>100_bases TTGACCCTTTTGTCAGTAAAATTAAATATAATTAAAGAAAATTAAAATCTAATTTTTCTTTTTTTGTTGTGAAAAATCAG AATTTTGATATAATGCTAAT
Downstream 100 bases:
>100_bases TTGAAAAAAATAAGAGAATATGATAAACTTGTTTCTGTCAGTAATTTTAGCTTAAAAATTTACTGACAGAAATAATTTGG TCCGATAGCTCAGCTGGATA
Product: transcription regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 461; Mature: 461
Protein sequence:
>461_residues MKLWIKTLLMLGSIILVTAIAAGGYTLTVLNSTTKAFKMTYTNAGNKKTEQVIQATEPLTILLMGVDTGGEGRGTSDSWN GNSDSQILMTLNPKTHTTTMVSIERDTMTNILDADGNIVSKQKMNAAYPLGYNSGSSSDGLKNAVSYAMKTISAQTGINI DSFVTVNFDGLVNMVDNVGGIDINNTTGQTLYISDTEPQYTAKVPPGKQHINGDQALVYTRDRHHLSNGDYGRAAHQREV IAALMKKILALDNITRYEQFLNEASKDFRTNIPINASTITSLLGYKDCFNKVVSIQYEGVGEMVDGASYQFMPTDIYLAM QNIMKKSLDESTVTTLPSSLITYESVFGSGTAPFYYLPSATVTEKGKSTVTYGVDTQGNLVSLNSKNSGNYVSTSGGSVQ SDSSSGSSSSSSDSTATSSSDSTYQQDNTYNDGYNNSNDSTTSSYGTDDTNTGNYGYGTSQ
Sequences:
>Translated_461_residues MKLWIKTLLMLGSIILVTAIAAGGYTLTVLNSTTKAFKMTYTNAGNKKTEQVIQATEPLTILLMGVDTGGEGRGTSDSWN GNSDSQILMTLNPKTHTTTMVSIERDTMTNILDADGNIVSKQKMNAAYPLGYNSGSSSDGLKNAVSYAMKTISAQTGINI DSFVTVNFDGLVNMVDNVGGIDINNTTGQTLYISDTEPQYTAKVPPGKQHINGDQALVYTRDRHHLSNGDYGRAAHQREV IAALMKKILALDNITRYEQFLNEASKDFRTNIPINASTITSLLGYKDCFNKVVSIQYEGVGEMVDGASYQFMPTDIYLAM QNIMKKSLDESTVTTLPSSLITYESVFGSGTAPFYYLPSATVTEKGKSTVTYGVDTQGNLVSLNSKNSGNYVSTSGGSVQ SDSSSGSSSSSSDSTATSSSDSTYQQDNTYNDGYNNSNDSTTSSYGTDDTNTGNYGYGTSQ >Mature_461_residues MKLWIKTLLMLGSIILVTAIAAGGYTLTVLNSTTKAFKMTYTNAGNKKTEQVIQATEPLTILLMGVDTGGEGRGTSDSWN GNSDSQILMTLNPKTHTTTMVSIERDTMTNILDADGNIVSKQKMNAAYPLGYNSGSSSDGLKNAVSYAMKTISAQTGINI DSFVTVNFDGLVNMVDNVGGIDINNTTGQTLYISDTEPQYTAKVPPGKQHINGDQALVYTRDRHHLSNGDYGRAAHQREV IAALMKKILALDNITRYEQFLNEASKDFRTNIPINASTITSLLGYKDCFNKVVSIQYEGVGEMVDGASYQFMPTDIYLAM QNIMKKSLDESTVTTLPSSLITYESVFGSGTAPFYYLPSATVTEKGKSTVTYGVDTQGNLVSLNSKNSGNYVSTSGGSVQ SDSSSGSSSSSSDSTATSSSDSTYQQDNTYNDGYNNSNDSTTSSYGTDDTNTGNYGYGTSQ
Specific function: Involved in biofilm formation, cell division, autolysis and the regulation of acid and oxidative stress tolerance. May be associated with systemic virulence in blood [H]
COG id: COG1316
COG function: function code K; Transcriptional regulator
Gene ontology:
Cell location: Cell envelope (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the LytR/CpsA/Psr regulatory protein family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004474 [H]
Pfam domain/function: PF03816 LytR_cpsA_psr [H]
EC number: NA
Molecular weight: Translated: 49468; Mature: 49468
Theoretical pI: Translated: 4.68; Mature: 4.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLWIKTLLMLGSIILVTAIAAGGYTLTVLNSTTKAFKMTYTNAGNKKTEQVIQATEPLT CHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCEEEEEEEECCCCHHHHHHHHHCCCEE ILLMGVDTGGEGRGTSDSWNGNSDSQILMTLNPKTHTTTMVSIERDTMTNILDADGNIVS EEEEEECCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEEEEHHHHHHHHCCCCCEEC KQKMNAAYPLGYNSGSSSDGLKNAVSYAMKTISAQTGINIDSFVTVNFDGLVNMVDNVGG HHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHCCCC IDINNTTGQTLYISDTEPQYTAKVPPGKQHINGDQALVYTRDRHHLSNGDYGRAAHQREV EEECCCCCCEEEEECCCCCEEEECCCCHHHCCCCEEEEEECCCCCCCCCCCCCHHHHHHH IAALMKKILALDNITRYEQFLNEASKDFRTNIPINASTITSLLGYKDCFNKVVSIQYEGV HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHEEEEECCC GEMVDGASYQFMPTDIYLAMQNIMKKSLDESTVTTLPSSLITYESVFGSGTAPFYYLPSA CHHHCCCCEEEECHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHCCCCCCEEECCCC TVTEKGKSTVTYGVDTQGNLVSLNSKNSGNYVSTSGGSVQSDSSSGSSSSSSDSTATSSS CCCCCCCCEEEEECCCCCCEEEECCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCC DSTYQQDNTYNDGYNNSNDSTTSSYGTDDTNTGNYGYGTSQ CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MKLWIKTLLMLGSIILVTAIAAGGYTLTVLNSTTKAFKMTYTNAGNKKTEQVIQATEPLT CHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCEEEEEEEECCCCHHHHHHHHHCCCEE ILLMGVDTGGEGRGTSDSWNGNSDSQILMTLNPKTHTTTMVSIERDTMTNILDADGNIVS EEEEEECCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEEEEHHHHHHHHCCCCCEEC KQKMNAAYPLGYNSGSSSDGLKNAVSYAMKTISAQTGINIDSFVTVNFDGLVNMVDNVGG HHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHCCCC IDINNTTGQTLYISDTEPQYTAKVPPGKQHINGDQALVYTRDRHHLSNGDYGRAAHQREV EEECCCCCCEEEEECCCCCEEEECCCCHHHCCCCEEEEEECCCCCCCCCCCCCHHHHHHH IAALMKKILALDNITRYEQFLNEASKDFRTNIPINASTITSLLGYKDCFNKVVSIQYEGV HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHEEEEECCC GEMVDGASYQFMPTDIYLAMQNIMKKSLDESTVTTLPSSLITYESVFGSGTAPFYYLPSA CHHHCCCCEEEECHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHCCCCCCEEECCCC TVTEKGKSTVTYGVDTQGNLVSLNSKNSGNYVSTSGGSVQSDSSSGSSSSSSDSTATSSS CCCCCCCCEEEEECCCCCCEEEECCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCC DSTYQQDNTYNDGYNNSNDSTTSSYGTDDTNTGNYGYGTSQ CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12397186 [H]