Definition | Lactococcus lactis subsp. lactis Il1403, complete genome. |
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Accession | NC_002662 |
Length | 2,365,589 |
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The map label for this gene is yedE
Identifier: 15672408
GI number: 15672408
Start: 437338
End: 437823
Strand: Direct
Name: yedE
Synonym: L37338
Alternate gene names: 15672408
Gene position: 437338-437823 (Clockwise)
Preceding gene: 15672406
Following gene: 30023990
Centisome position: 18.49
GC content: 35.39
Gene sequence:
>486_bases ATGTTTGGAATAGGAAAAAAGAAAGAATTGAAAGACGATAAAGAGCTATATAATCCAGTTTCTGGAGAAGTTATTGAACT TTCAAAAGTAAACGATCCGGTATTTTCAAAGAAAATAATGGGTGATGGTTTTGCAGTTGAGCCCAAAGAAAATAAAATTT TTGCTCCAGTTTCTGCAAAAGTAACTTTGGTTCAGGGACATGCAATTGGCTTTAAACGTGCTGATGGCTTAGATATTCTT TTACATCTAGGTATTGATACAGTAGCTCTTAAAGGGGCACCATTTAAAATTAAAGTTAAAGTGGATGATATTGTTAATGG TGGTGATGAGCTGGGAACTGTTGATTGGGGGCAGATTGAAGCTGCTGGTTTGGATAAGACAACAATGGTTATTTTTACAA ATACTAAAGACCTTTTATCTGGCTTTGAGGTTAAATATGGTTCAGCCAATGCACGTGATGAATTAGGTCAGGCAAGTGTT AAGTAA
Upstream 100 bases:
>100_bases TTATCATAAAAATAATTGTTACCGCTTGCTGAAAACGTTTTTATATGATACAATGATTTTGTTAACTTGTACGTACAACT TCAAAAGATAGGAGATTCTT
Downstream 100 bases:
>100_bases GTAAAAATATCAACCAATAAATTTATAGCACAAAGAAGACGAGAACTTTGGATATAGATTTTGTGACTATTAAACTCGTC AATTATTATTTTATATTATG
Product: hypothetical protein
Products: NA
Alternate protein names: EIIBCA-Scr; EII-Scr; Sucrose-specific phosphotransferase enzyme IIB component; PTS system sucrose-specific EIIB component; Sucrose permease IIC component; PTS system sucrose-specific EIIC component; Sucrose-specific phosphotransferase enzyme IIA component; PTS system sucrose-specific EIIA component [H]
Number of amino acids: Translated: 161; Mature: 161
Protein sequence:
>161_residues MFGIGKKKELKDDKELYNPVSGEVIELSKVNDPVFSKKIMGDGFAVEPKENKIFAPVSAKVTLVQGHAIGFKRADGLDIL LHLGIDTVALKGAPFKIKVKVDDIVNGGDELGTVDWGQIEAAGLDKTTMVIFTNTKDLLSGFEVKYGSANARDELGQASV K
Sequences:
>Translated_161_residues MFGIGKKKELKDDKELYNPVSGEVIELSKVNDPVFSKKIMGDGFAVEPKENKIFAPVSAKVTLVQGHAIGFKRADGLDIL LHLGIDTVALKGAPFKIKVKVDDIVNGGDELGTVDWGQIEAAGLDKTTMVIFTNTKDLLSGFEVKYGSANARDELGQASV K >Mature_161_residues MFGIGKKKELKDDKELYNPVSGEVIELSKVNDPVFSKKIMGDGFAVEPKENKIFAPVSAKVTLVQGHAIGFKRADGLDIL LHLGIDTVALKGAPFKIKVKVDDIVNGGDELGTVDWGQIEAAGLDKTTMVIFTNTKDLLSGFEVKYGSANARDELGQASV K
Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. This
COG id: COG2190
COG function: function code G; Phosphotransferase system IIA components
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PTS EIIC type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1790159, Length=123, Percent_Identity=39.0243902439024, Blast_Score=93, Evalue=1e-20, Organism=Escherichia coli, GI1788757, Length=126, Percent_Identity=34.1269841269841, Blast_Score=74, Evalue=4e-15, Organism=Escherichia coli, GI1786894, Length=133, Percent_Identity=32.3308270676692, Blast_Score=71, Evalue=3e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011055 - InterPro: IPR018113 - InterPro: IPR001127 - InterPro: IPR001996 - InterPro: IPR003352 - InterPro: IPR013013 - InterPro: IPR011535 - InterPro: IPR010973 [H]
Pfam domain/function: PF00358 PTS_EIIA_1; PF00367 PTS_EIIB; PF02378 PTS_EIIC [H]
EC number: =2.7.1.69 [H]
Molecular weight: Translated: 17321; Mature: 17321
Theoretical pI: Translated: 5.83; Mature: 5.83
Prosite motif: PS00371 PTS_EIIA_TYPE_1_HIS ; PS51093 PTS_EIIA_TYPE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFGIGKKKELKDDKELYNPVSGEVIELSKVNDPVFSKKIMGDGFAVEPKENKIFAPVSAK CCCCCCCCCCCCCHHHCCCCCCCEEEEECCCCCHHHHHHCCCCEEECCCCCEEEECCCEE VTLVQGHAIGFKRADGLDILLHLGIDTVALKGAPFKIKVKVDDIVNGGDELGTVDWGQIE EEEEECCEECEECCCCCEEEEEECCCEEEECCCCEEEEEEEHHCCCCCCCCCCCCCCEEE AAGLDKTTMVIFTNTKDLLSGFEVKYGSANARDELGQASVK ECCCCCEEEEEEECCHHHHCCCEEEECCCCCCHHCCCCCCC >Mature Secondary Structure MFGIGKKKELKDDKELYNPVSGEVIELSKVNDPVFSKKIMGDGFAVEPKENKIFAPVSAK CCCCCCCCCCCCCHHHCCCCCCCEEEEECCCCCHHHHHHCCCCEEECCCCCEEEECCCEE VTLVQGHAIGFKRADGLDILLHLGIDTVALKGAPFKIKVKVDDIVNGGDELGTVDWGQIE EEEEECCEECEECCCCCEEEEEECCCEEEECCCCEEEEEEEHHCCCCCCCCCCCCCCEEE AAGLDKTTMVIFTNTKDLLSGFEVKYGSANARDELGQASVK ECCCCCEEEEEEECCHHHHCCCEEEECCCCCCHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 2536656; 12397186; 8336109 [H]