Definition | Lactococcus lactis subsp. lactis Il1403, complete genome. |
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Accession | NC_002662 |
Length | 2,365,589 |
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The map label for this gene is gpmA
Identifier: 15672318
GI number: 15672318
Start: 334509
End: 335210
Strand: Direct
Name: gpmA
Synonym: L0011
Alternate gene names: 15672318
Gene position: 334509-335210 (Clockwise)
Preceding gene: 15672317
Following gene: 15672319
Centisome position: 14.14
GC content: 40.46
Gene sequence:
>702_bases ATGCCAAAATTAGTATTTGCACGTCACGGTGAATCTGAATGGAATCTTGCTAACCTTTTCACAGGTTGGGCTGACGTTGA CCTTTCTGAAAACGGAACTAAACAAGCGATTGAAGCTGGTAAATTGATTAAAGAAGCTGGAATCGAATTTGATATTGCTT ACACTTCAGTATTGAAACGTGCTATCAAAACAACTAACCTTGCTCTTGAATATTCAGACCAACTTTGGGTACCAGTTGTT AAATCATGGCGCTTGAACGAACGTCACTACGGTGGTTTGACAGGTTTGAACAAAGCTGACGCTGCTGCAAAACATGGTGA TGAACAAGTTCACATCTGGCGTCGTTCATATGATGTATTGCCACCAGCAATGGATCATGATGATAAATATACAGCTCACG GAGACCGTCGTTACGCTGGTCTTGAAGATTCATTGATTCCTGATGCTGAAAACCTCAAAGTTACTTTGGAACGTGCTCTT CCATTCTGGGAAGACCAAATCGCTCCAGCTTTGAAAGAAGGAAAAAATGTCTTCGTTGGTGCTCACGGTAACTCAATCCG TGCACTCGTTAAACAAATCAAAAAACTTTCTGATGACGAAATTATGGATGTTGAAATCCCTAACTTCCCACCACTTGTTT TCGAATTTGATGACAACTTGAACGTTCAAAACGAATACTACTTGGCTCCTAAAAAAGCATAA
Upstream 100 bases:
>100_bases AAATAAAAGCTAGAAAAAAAAGGAAAAATGTAGTAAAATTAACTTTGTAAATGAACGAACTAAATTTCGTTCAAGTAAAA ATAAACGGAGAATACACAAA
Downstream 100 bases:
>100_bases TATTTGAATGAAAATACTCTAAGTTATAGTAGATACTCATCTATTTAGGACTTAGAGTGTTTTTTTGTAATCAATGCAAT AGTTTGTAAGTTTTTGAACA
Product: phosphoglyceromutase
Products: NA
Alternate protein names: BPG-dependent PGAM; PGAM; Phosphoglyceromutase; dPGM
Number of amino acids: Translated: 233; Mature: 232
Protein sequence:
>233_residues MPKLVFARHGESEWNLANLFTGWADVDLSENGTKQAIEAGKLIKEAGIEFDIAYTSVLKRAIKTTNLALEYSDQLWVPVV KSWRLNERHYGGLTGLNKADAAAKHGDEQVHIWRRSYDVLPPAMDHDDKYTAHGDRRYAGLEDSLIPDAENLKVTLERAL PFWEDQIAPALKEGKNVFVGAHGNSIRALVKQIKKLSDDEIMDVEIPNFPPLVFEFDDNLNVQNEYYLAPKKA
Sequences:
>Translated_233_residues MPKLVFARHGESEWNLANLFTGWADVDLSENGTKQAIEAGKLIKEAGIEFDIAYTSVLKRAIKTTNLALEYSDQLWVPVV KSWRLNERHYGGLTGLNKADAAAKHGDEQVHIWRRSYDVLPPAMDHDDKYTAHGDRRYAGLEDSLIPDAENLKVTLERAL PFWEDQIAPALKEGKNVFVGAHGNSIRALVKQIKKLSDDEIMDVEIPNFPPLVFEFDDNLNVQNEYYLAPKKA >Mature_232_residues PKLVFARHGESEWNLANLFTGWADVDLSENGTKQAIEAGKLIKEAGIEFDIAYTSVLKRAIKTTNLALEYSDQLWVPVVK SWRLNERHYGGLTGLNKADAAAKHGDEQVHIWRRSYDVLPPAMDHDDKYTAHGDRRYAGLEDSLIPDAENLKVTLERALP FWEDQIAPALKEGKNVFVGAHGNSIRALVKQIKKLSDDEIMDVEIPNFPPLVFEFDDNLNVQNEYYLAPKKA
Specific function: Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
COG id: COG0588
COG function: function code G; Phosphoglycerate mutase 1
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily
Homologues:
Organism=Homo sapiens, GI50593010, Length=220, Percent_Identity=55, Blast_Score=263, Evalue=9e-71, Organism=Homo sapiens, GI4505753, Length=220, Percent_Identity=55.4545454545455, Blast_Score=251, Evalue=5e-67, Organism=Homo sapiens, GI71274132, Length=220, Percent_Identity=53.1818181818182, Blast_Score=238, Evalue=4e-63, Organism=Homo sapiens, GI4502445, Length=222, Percent_Identity=46.3963963963964, Blast_Score=215, Evalue=3e-56, Organism=Homo sapiens, GI40353764, Length=222, Percent_Identity=46.3963963963964, Blast_Score=215, Evalue=3e-56, Organism=Homo sapiens, GI310129614, Length=161, Percent_Identity=58.3850931677019, Blast_Score=184, Evalue=8e-47, Organism=Escherichia coli, GI1786970, Length=229, Percent_Identity=53.2751091703057, Blast_Score=254, Evalue=5e-69, Organism=Saccharomyces cerevisiae, GI6322697, Length=232, Percent_Identity=50, Blast_Score=245, Evalue=5e-66, Organism=Saccharomyces cerevisiae, GI6324516, Length=281, Percent_Identity=33.4519572953737, Blast_Score=131, Evalue=1e-31, Organism=Saccharomyces cerevisiae, GI6320183, Length=285, Percent_Identity=30.5263157894737, Blast_Score=128, Evalue=7e-31, Organism=Saccharomyces cerevisiae, GI6324857, Length=195, Percent_Identity=26.1538461538462, Blast_Score=72, Evalue=9e-14, Organism=Drosophila melanogaster, GI24646216, Length=221, Percent_Identity=51.131221719457, Blast_Score=238, Evalue=2e-63, Organism=Drosophila melanogaster, GI85725270, Length=221, Percent_Identity=52.0361990950226, Blast_Score=229, Evalue=1e-60, Organism=Drosophila melanogaster, GI85725272, Length=221, Percent_Identity=52.0361990950226, Blast_Score=229, Evalue=1e-60, Organism=Drosophila melanogaster, GI24650981, Length=221, Percent_Identity=52.0361990950226, Blast_Score=229, Evalue=1e-60, Organism=Drosophila melanogaster, GI28571817, Length=218, Percent_Identity=39.4495412844037, Blast_Score=169, Evalue=1e-42, Organism=Drosophila melanogaster, GI28571815, Length=218, Percent_Identity=39.4495412844037, Blast_Score=169, Evalue=1e-42, Organism=Drosophila melanogaster, GI24648979, Length=218, Percent_Identity=39.4495412844037, Blast_Score=169, Evalue=1e-42,
Paralogues:
None
Copy number: 960 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 40 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): GPMA_LACLA (Q9CIM0)
Other databases:
- EMBL: AE005176 - PIR: H86666 - RefSeq: NP_266492.1 - ProteinModelPortal: Q9CIM0 - SMR: Q9CIM0 - PhosSite: Q9CIM0 - GeneID: 1113947 - GenomeReviews: AE005176_GR - KEGG: lla:L0011 - NMPDR: fig|272623.1.peg.344 - HOGENOM: HBG658938 - OMA: TGWKDPD - ProtClustDB: PRK14117 - BioCyc: LLAC272623:L0011-MONOMER - BRENDA: 5.4.2.1 - GO: GO:0006096 - HAMAP: MF_01039 - InterPro: IPR013078 - InterPro: IPR005952 - PANTHER: PTHR11931 - SMART: SM00855 - TIGRFAMs: TIGR01258
Pfam domain/function: PF00300 PGAM
EC number: =5.4.2.1
Molecular weight: Translated: 26330; Mature: 26199
Theoretical pI: Translated: 5.19; Mature: 5.19
Prosite motif: PS00175 PG_MUTASE
Important sites: ACT_SITE 9-9 ACT_SITE 182-182
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKLVFARHGESEWNLANLFTGWADVDLSENGTKQAIEAGKLIKEAGIEFDIAYTSVLKR CCCEEEEECCCCCCCHHHHCCCCEECCCCCCCHHHHHHHHHHHHHCCCEEEHHHHHHHHH AIKTTNLALEYSDQLWVPVVKSWRLNERHYGGLTGLNKADAAAKHGDEQVHIWRRSYDVL HHHHHCEEEEECCCCCEEHHHCCCCCCCCCCCCCCCCHHHHHHHCCCCEEEEEECCCCCC PPAMDHDDKYTAHGDRRYAGLEDSLIPDAENLKVTLERALPFWEDQIAPALKEGKNVFVG CCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCEEEHHHCCCCHHHHHHHHHHCCCEEEEE AHGNSIRALVKQIKKLSDDEIMDVEIPNFPPLVFEFDDNLNVQNEYYLAPKKA ECCCHHHHHHHHHHHCCCCCEEEEECCCCCCEEEEECCCCCCCCEEEECCCCC >Mature Secondary Structure PKLVFARHGESEWNLANLFTGWADVDLSENGTKQAIEAGKLIKEAGIEFDIAYTSVLKR CCEEEEECCCCCCCHHHHCCCCEECCCCCCCHHHHHHHHHHHHHCCCEEEHHHHHHHHH AIKTTNLALEYSDQLWVPVVKSWRLNERHYGGLTGLNKADAAAKHGDEQVHIWRRSYDVL HHHHHCEEEEECCCCCEEHHHCCCCCCCCCCCCCCCCHHHHHHHCCCCEEEEEECCCCCC PPAMDHDDKYTAHGDRRYAGLEDSLIPDAENLKVTLERALPFWEDQIAPALKEGKNVFVG CCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCEEEHHHCCCCHHHHHHHHHHCCCEEEEE AHGNSIRALVKQIKKLSDDEIMDVEIPNFPPLVFEFDDNLNVQNEYYLAPKKA ECCCHHHHHHHHHHHCCCCCEEEEECCCCCCEEEEECCCCCCCCEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11337471