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The map label for this gene is ydcF

Identifier: 15672308

GI number: 15672308

Start: 325499

End: 326320

Strand: Direct

Name: ydcF

Synonym: L125503

Alternate gene names: NA

Gene position: 325499-326320 (Clockwise)

Preceding gene: 15672307

Following gene: 15672309

Centisome position: 13.76

GC content: 33.33

Gene sequence:

>822_bases
ATGAATAATCAACTTAGTGTTCTAGGCTATCAAGCTGGAAATTCTTTTATTTACCAACTGAATGCAACAGCAAAACTCCT
TTTCTTTCTATTAATTTCTATCAGCAGTATGGTGACTTATGATACGAGATATTTGGCTTTTGTTGCTTTATTTTCGGTAG
TTTTATTTTATTTTTCTAAAATTCCTTTTTCATCAGTAAAAAGGGTTGCCCAATTTGCAGCAATTTTTGCGATTTTAAAT
CTGCTTTTTGTATTTATTTTTGACCCTGGATATGGCGCGCGACTTTATGATTCAAAAACAATCCTTTGGGGACCTCTTAC
TTTAGAAGAACTTTTTTACCTTTTTAATCTCGTCTTGAAGTATTTTTCAACCATTCCGCTCGCTTTACTCTTTATCTTAA
CTACTAATCCGAGCCAATTTGCCAGTAGTTTAAATAAAATTGGTCTGCCTTATCGTTCCTCATATTCGGTTTCCTTAGCG
CTGCGCTATATTCCTGATATGCAAGAAAGATTTTTAGCAATCCGTAATGCTGGACAGGCCAGAGGAATGGATTTATCAAA
AAAAGTAGGACTTTTTTCGCGAATAAAATTAAATGTTCAATTGTTACTTCCTTTAATTTTTTCCAGTTTAGAACAAATTG
ATACTATTTCCACAGCTATGGAGCTTAGACGATTTGGTAAAAAGAAGAAAAGAAGTTGGTATTCTTATCAACCTTTGAAT
GTTAAAGATTACTTGGTTATCTTGCTTGCGCTTTTAGGAGTGGCGATTGTTGTTCTTCTCTTCTTTGTAAATCAGGGCCG
ATTTTTTAATCCATTTCATTAA

Upstream 100 bases:

>100_bases
AGTCAACCAAGCCTTTATCAACTTGCCAGACAAACAGATACCAATCCCGTTTTACTGACAAAAGCTTTCATCAATTTTCA
GAATCAGGAGAGATTAAAGC

Downstream 100 bases:

>100_bases
AAAAAGCAGGTTTTCTGCTTTTTTCTTATCTTGCAAAAATGGGTGGAAAATGGCATAATAGGACTTGTAAAAAACTTTTG
ACAAGCCAATTGTTTGCAAA

Product: ABC transporter permease protein

Products: NA

Alternate protein names: ABC Transporter Permease Protein; ABC-Type Cobalt Transport System Permease Component CbiQ; ABC Transporter Permease; ABC-Type Cobalt Transport System; Cobalt ABC Transporter Permease; ABC-Type Cobalt Transport System Permease Component; ABC Transporter; Cobalt Transport Protein CbiQ; ECF Transporter Transmembrane Component; ABC-Type Cobalt Import System Permease Component; Cobalt Transporter; Cobalt ABC Transporter; Cobalt ABC Transporter Permease Component; Cobalt ABC Transporter Permease Protein; ABC Transporter Transmembrane Protein; ABC-Type Cobalt Transport System Permease Protein; ABC Transporter Membrane-Spanning Permease; Cobalt Permease; Cobalt Transporter Superfamily

Number of amino acids: Translated: 273; Mature: 273

Protein sequence:

>273_residues
MNNQLSVLGYQAGNSFIYQLNATAKLLFFLLISISSMVTYDTRYLAFVALFSVVLFYFSKIPFSSVKRVAQFAAIFAILN
LLFVFIFDPGYGARLYDSKTILWGPLTLEELFYLFNLVLKYFSTIPLALLFILTTNPSQFASSLNKIGLPYRSSYSVSLA
LRYIPDMQERFLAIRNAGQARGMDLSKKVGLFSRIKLNVQLLLPLIFSSLEQIDTISTAMELRRFGKKKKRSWYSYQPLN
VKDYLVILLALLGVAIVVLLFFVNQGRFFNPFH

Sequences:

>Translated_273_residues
MNNQLSVLGYQAGNSFIYQLNATAKLLFFLLISISSMVTYDTRYLAFVALFSVVLFYFSKIPFSSVKRVAQFAAIFAILN
LLFVFIFDPGYGARLYDSKTILWGPLTLEELFYLFNLVLKYFSTIPLALLFILTTNPSQFASSLNKIGLPYRSSYSVSLA
LRYIPDMQERFLAIRNAGQARGMDLSKKVGLFSRIKLNVQLLLPLIFSSLEQIDTISTAMELRRFGKKKKRSWYSYQPLN
VKDYLVILLALLGVAIVVLLFFVNQGRFFNPFH
>Mature_273_residues
MNNQLSVLGYQAGNSFIYQLNATAKLLFFLLISISSMVTYDTRYLAFVALFSVVLFYFSKIPFSSVKRVAQFAAIFAILN
LLFVFIFDPGYGARLYDSKTILWGPLTLEELFYLFNLVLKYFSTIPLALLFILTTNPSQFASSLNKIGLPYRSSYSVSLA
LRYIPDMQERFLAIRNAGQARGMDLSKKVGLFSRIKLNVQLLLPLIFSSLEQIDTISTAMELRRFGKKKKRSWYSYQPLN
VKDYLVILLALLGVAIVVLLFFVNQGRFFNPFH

Specific function: Unknown

COG id: COG0619

COG function: function code P; ABC-type cobalt transport system, permease component CbiQ and related transporters

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31221; Mature: 31221

Theoretical pI: Translated: 10.40; Mature: 10.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNQLSVLGYQAGNSFIYQLNATAKLLFFLLISISSMVTYDTRYLAFVALFSVVLFYFSK
CCCCEEEEEEECCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
IPFSSVKRVAQFAAIFAILNLLFVFIFDPGYGARLYDSKTILWGPLTLEELFYLFNLVLK
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCEEEECCCCHHHHHHHHHHHHH
YFSTIPLALLFILTTNPSQFASSLNKIGLPYRSSYSVSLALRYIPDMQERFLAIRNAGQA
HHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCHHEEHHHHCCCHHHHHHHHHCCCCC
RGMDLSKKVGLFSRIKLNVQLLLPLIFSSLEQIDTISTAMELRRFGKKKKRSWYSYQPLN
CCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
VKDYLVILLALLGVAIVVLLFFVNQGRFFNPFH
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MNNQLSVLGYQAGNSFIYQLNATAKLLFFLLISISSMVTYDTRYLAFVALFSVVLFYFSK
CCCCEEEEEEECCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
IPFSSVKRVAQFAAIFAILNLLFVFIFDPGYGARLYDSKTILWGPLTLEELFYLFNLVLK
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCEEEECCCCHHHHHHHHHHHHH
YFSTIPLALLFILTTNPSQFASSLNKIGLPYRSSYSVSLALRYIPDMQERFLAIRNAGQA
HHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCHHEEHHHHCCCHHHHHHHHHCCCCC
RGMDLSKKVGLFSRIKLNVQLLLPLIFSSLEQIDTISTAMELRRFGKKKKRSWYSYQPLN
CCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
VKDYLVILLALLGVAIVVLLFFVNQGRFFNPFH
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA