Click here to switch to the map view.

The map label for this gene is ydcD

Identifier: 15672306

GI number: 15672306

Start: 323152

End: 323700

Strand: Direct

Name: ydcD

Synonym: L123147

Alternate gene names: NA

Gene position: 323152-323700 (Clockwise)

Preceding gene: 15672305

Following gene: 15672307

Centisome position: 13.66

GC content: 37.16

Gene sequence:

>549_bases
ATGAAAAATAACTCTGTAAAAATTGTTGTTGCCACTGGGATTGGGGCTGCTTTGTTTGTGATTATTGGTTGGCTAATTAA
TATTCCTACACCAATTCCAAATACTAGTATTCAATTGCAATATGCGGTCCTTGCCCTATTTTCAGCCTTATTTGGCCCTT
TAGCTGGTTTCTTGATCGGATTTATTGGTCATGCCCTTAAAGATTCATTTCTCTATGGTGCGCCTTGGTGGACTTGGGTT
TTAGGCTCAGGTTTAATAGGCTTATTTCTAGCTTTTGGAGTCAAAAGAGAAACTTTGACTCAAGGAATTTTTGGAAATAA
AGAAATCATTCGTTTTAATATTGTTCAATTTTTAGCCAATGTCGTAGTTTGGGGAATTATTGCTCCAATTGGGGATGTTT
TAGTTTATAGTGAACCGGCAAATAAGGTCTTCACACAAGGAATTGTTGCTGGTTTAGTAAATGCATTGACTATTGCCGTA
GCAGGAACTTTACTACTCAAACTCTATGCTGCTACCAGAACCAAATCTGGCTCACTCGATAAAGAATAA

Upstream 100 bases:

>100_bases
TATTGGTTCAGCTTGTTGGGGATTTCTTAGCTAGACGGGTTTCACATCGATAATTTATCAAATAATTTTAGATAAAAATA
TTTTATAAAAAGGAGAAACA

Downstream 100 bases:

>100_bases
AAAGCTCTAGATATGCTAAAATAAAAGCAGCAAATATTTGCTGCTTTTACGCTTGTATCGGTTTAATAAAGCACAAAAAA
TAAAGTATCTCTAAAAAGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 182; Mature: 182

Protein sequence:

>182_residues
MKNNSVKIVVATGIGAALFVIIGWLINIPTPIPNTSIQLQYAVLALFSALFGPLAGFLIGFIGHALKDSFLYGAPWWTWV
LGSGLIGLFLAFGVKRETLTQGIFGNKEIIRFNIVQFLANVVVWGIIAPIGDVLVYSEPANKVFTQGIVAGLVNALTIAV
AGTLLLKLYAATRTKSGSLDKE

Sequences:

>Translated_182_residues
MKNNSVKIVVATGIGAALFVIIGWLINIPTPIPNTSIQLQYAVLALFSALFGPLAGFLIGFIGHALKDSFLYGAPWWTWV
LGSGLIGLFLAFGVKRETLTQGIFGNKEIIRFNIVQFLANVVVWGIIAPIGDVLVYSEPANKVFTQGIVAGLVNALTIAV
AGTLLLKLYAATRTKSGSLDKE
>Mature_182_residues
MKNNSVKIVVATGIGAALFVIIGWLINIPTPIPNTSIQLQYAVLALFSALFGPLAGFLIGFIGHALKDSFLYGAPWWTWV
LGSGLIGLFLAFGVKRETLTQGIFGNKEIIRFNIVQFLANVVVWGIIAPIGDVLVYSEPANKVFTQGIVAGLVNALTIAV
AGTLLLKLYAATRTKSGSLDKE

Specific function: Unknown

COG id: COG4720

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0397 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009825
- InterPro:   IPR022914 [H]

Pfam domain/function: PF07155 DUF1393 [H]

EC number: NA

Molecular weight: Translated: 19432; Mature: 19432

Theoretical pI: Translated: 10.20; Mature: 10.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
0.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
0.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNNSVKIVVATGIGAALFVIIGWLINIPTPIPNTSIQLQYAVLALFSALFGPLAGFLIG
CCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
FIGHALKDSFLYGAPWWTWVLGSGLIGLFLAFGVKRETLTQGIFGNKEIIRFNIVQFLAN
HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCHHHHHHHHHHHHH
VVVWGIIAPIGDVLVYSEPANKVFTQGIVAGLVNALTIAVAGTLLLKLYAATRTKSGSLD
HHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
KE
CC
>Mature Secondary Structure
MKNNSVKIVVATGIGAALFVIIGWLINIPTPIPNTSIQLQYAVLALFSALFGPLAGFLIG
CCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
FIGHALKDSFLYGAPWWTWVLGSGLIGLFLAFGVKRETLTQGIFGNKEIIRFNIVQFLAN
HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCHHHHHHHHHHHHH
VVVWGIIAPIGDVLVYSEPANKVFTQGIVAGLVNALTIAVAGTLLLKLYAATRTKSGSLD
HHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
KE
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA