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The map label for this gene is ychF

Identifier: 15672261

GI number: 15672261

Start: 277628

End: 278428

Strand: Direct

Name: ychF

Synonym: L77627

Alternate gene names: 15672261

Gene position: 277628-278428 (Clockwise)

Preceding gene: 15672260

Following gene: 15672262

Centisome position: 11.74

GC content: 35.33

Gene sequence:

>801_bases
ATGCAAAATATGCTGATGGGACGTTATATTCCAGGTGATAGTATCATTCACCGCATGGACCCGCGTTCAAAACTTTTGGT
GATGATTGCTTTTGTTGTCATTATCTTTTTGGCTCATGATTGGTTAGGTTATCTTCTTTTAGTGCTTTACACTTTAGCGG
GTGTTTTATTATCCAAGATTTCAGTTTCCTATTTTTTAAAAGGCCTACGGCCAATGATTGGTTTAATTCTGTTCACAGTT
ATTTTCCAAATGCTTTTTACTAATGGTCAACATGTCATTTTTAGTCTATGGTTTATCAAAATTTCCACAGAATCTTTGAT
TAATGCCGTCTATATTTTCTTTCGTTTTGTCTTGATTATTTTTATGTCAACAATTTTGACGCTGACCACGCCACCATTGA
CCTTGGCTGATGGAATCGAAAAAGGCTTAGGACCTTTGAAAAAAATCAAAGTCCCTGTTCACGAATTAGGTTTGATGTTA
TCTATTTCTTTACGCTTTATTCCAACATTAATGGATGACACAACAATGATTATGAATGCTCAAAAAGCCAGAGGAATGGA
TTTTGGCGAAGGAAATTTACTGAAAAAAATTAAATCAGTCATTCCAATTTTAATTCCATTATTTGTCAGTTCTTTCCGCC
GTGCGGATGACTTAGCAGTCGCAATGGAAAGCAGAGGCTATCAAGGGGGAGATGGACGTACAAAATACCGTCAACTCAAA
TGGAAAATGCGAGATAGCTTGCTCGTTGTATCTATTATCATAATGACAATTTTACTTATTTTATGGTCAAAAGTTTCCTA
A

Upstream 100 bases:

>100_bases
AAAAAACAGGGGTCTATACTTTTGAAAAATTACCAATCACACGAGCTGAACTTGTTAATTTACTGACAAGTCTGTCAGTA
AAATCAGGAGGTGAAAACTG

Downstream 100 bases:

>100_bases
ATAAAAGCTCAAGAGGAGAAAAAATGATTACTTTAAACGTAAATAGCTTGGAAAATGCAGAAATTTTTTGGAAAGAATTA
GGTTTGGAAGATGAAGTAGC

Product: ABC transporter permease protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 266; Mature: 266

Protein sequence:

>266_residues
MQNMLMGRYIPGDSIIHRMDPRSKLLVMIAFVVIIFLAHDWLGYLLLVLYTLAGVLLSKISVSYFLKGLRPMIGLILFTV
IFQMLFTNGQHVIFSLWFIKISTESLINAVYIFFRFVLIIFMSTILTLTTPPLTLADGIEKGLGPLKKIKVPVHELGLML
SISLRFIPTLMDDTTMIMNAQKARGMDFGEGNLLKKIKSVIPILIPLFVSSFRRADDLAVAMESRGYQGGDGRTKYRQLK
WKMRDSLLVVSIIIMTILLILWSKVS

Sequences:

>Translated_266_residues
MQNMLMGRYIPGDSIIHRMDPRSKLLVMIAFVVIIFLAHDWLGYLLLVLYTLAGVLLSKISVSYFLKGLRPMIGLILFTV
IFQMLFTNGQHVIFSLWFIKISTESLINAVYIFFRFVLIIFMSTILTLTTPPLTLADGIEKGLGPLKKIKVPVHELGLML
SISLRFIPTLMDDTTMIMNAQKARGMDFGEGNLLKKIKSVIPILIPLFVSSFRRADDLAVAMESRGYQGGDGRTKYRQLK
WKMRDSLLVVSIIIMTILLILWSKVS
>Mature_266_residues
MQNMLMGRYIPGDSIIHRMDPRSKLLVMIAFVVIIFLAHDWLGYLLLVLYTLAGVLLSKISVSYFLKGLRPMIGLILFTV
IFQMLFTNGQHVIFSLWFIKISTESLINAVYIFFRFVLIIFMSTILTLTTPPLTLADGIEKGLGPLKKIKVPVHELGLML
SISLRFIPTLMDDTTMIMNAQKARGMDFGEGNLLKKIKSVIPILIPLFVSSFRRADDLAVAMESRGYQGGDGRTKYRQLK
WKMRDSLLVVSIIIMTILLILWSKVS

Specific function: Unknown

COG id: COG0619

COG function: function code P; ABC-type cobalt transport system, permease component CbiQ and related transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CbiQ family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003339 [H]

Pfam domain/function: PF02361 CbiQ [H]

EC number: NA

Molecular weight: Translated: 30177; Mature: 30177

Theoretical pI: Translated: 10.63; Mature: 10.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.0 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
6.0 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]