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The map label for this gene is ycgA

Identifier: 15672244

GI number: 15672244

Start: 261004

End: 261699

Strand: Direct

Name: ycgA

Synonym: L61006

Alternate gene names: 15672244

Gene position: 261004-261699 (Clockwise)

Preceding gene: 15672243

Following gene: 15672245

Centisome position: 11.03

GC content: 35.63

Gene sequence:

>696_bases
ATGATGAGAGGAAATTATCTCAATCGAGGTGGCAAAGGGGCTGACCGTTTTCAAAAAGGTCGGCGAGCTCAAAATTTCTT
TCCAACGATTATTCGACTTTTCAAATATATGCGCAGAGATTTATGGGGACTTCTTTTTTCAATTTTAATTGCTTCGCTGT
CAGTCATTTTGTCGGTTCAGGCACCCAAAATTTTGGGAAATGCAACCACAGTGATATTTGATGGCGTAACAAAAAGTCTA
AAAAATCATACCGCAATTCAAATTGACATGACTAAGGTCGAATCTATTTTGCTTTATGTCATGGTCATTTATCTGATTTC
ATTTATCTCTGGGATTTTGCAACAAAGCATTATGACACGCATTTCGCAACGAACAGTTTATACTTTACGTCGTGAATTTA
AAAACAAAATGAAAAAATTGCCAGTTTCATATTATGATAGCCATAGTAATGGGGATATCATGAGTCGAATGATAAATGAT
ATGGATAATATTTCAGGGACTTTAAATCAAACTTTGATTCAGCTTATCACAAGTCTCTTGCAATTTGTTGGAACTATTTA
TTTCATGTTGACCATCTCTTGGCAGTTGGCACTCGTCGCCTTTATCACAGTTCCTTTGGCAATGATTACGGTAAGGATTG
TTGCACCTTTATCGCAAAAATTCTTTGCTGAACAACAAAAAATCTGGGATTATTGA

Upstream 100 bases:

>100_bases
CGCAATATCAAGAAACAATGCAATCTCAACTCTCGGATGATGATTTGGTCAAGATGGGTGTTTCAATTGCACATTTGACC
GCCAGAGGAGGTGATGACCA

Downstream 100 bases:

>100_bases
ATGACCAAATTGAAGAAAATTATGCAGGACATGCGGTCATTAAAACATTCAATCATGAAGCCTCAGCTGAAAAAGAATTC
GCAAAAAGAAATGATAATTT

Product: ABC transporter ATP binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 231; Mature: 231

Protein sequence:

>231_residues
MMRGNYLNRGGKGADRFQKGRRAQNFFPTIIRLFKYMRRDLWGLLFSILIASLSVILSVQAPKILGNATTVIFDGVTKSL
KNHTAIQIDMTKVESILLYVMVIYLISFISGILQQSIMTRISQRTVYTLRREFKNKMKKLPVSYYDSHSNGDIMSRMIND
MDNISGTLNQTLIQLITSLLQFVGTIYFMLTISWQLALVAFITVPLAMITVRIVAPLSQKFFAEQQKIWDY

Sequences:

>Translated_231_residues
MMRGNYLNRGGKGADRFQKGRRAQNFFPTIIRLFKYMRRDLWGLLFSILIASLSVILSVQAPKILGNATTVIFDGVTKSL
KNHTAIQIDMTKVESILLYVMVIYLISFISGILQQSIMTRISQRTVYTLRREFKNKMKKLPVSYYDSHSNGDIMSRMIND
MDNISGTLNQTLIQLITSLLQFVGTIYFMLTISWQLALVAFITVPLAMITVRIVAPLSQKFFAEQQKIWDY
>Mature_231_residues
MMRGNYLNRGGKGADRFQKGRRAQNFFPTIIRLFKYMRRDLWGLLFSILIASLSVILSVQAPKILGNATTVIFDGVTKSL
KNHTAIQIDMTKVESILLYVMVIYLISFISGILQQSIMTRISQRTVYTLRREFKNKMKKLPVSYYDSHSNGDIMSRMIND
MDNISGTLNQTLIQLITSLLQFVGTIYFMLTISWQLALVAFITVPLAMITVRIVAPLSQKFFAEQQKIWDY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Homo sapiens, GI9955968, Length=198, Percent_Identity=23.7373737373737, Blast_Score=66, Evalue=3e-11,
Organism=Escherichia coli, GI1786653, Length=187, Percent_Identity=26.2032085561497, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI1787143, Length=112, Percent_Identity=27.6785714285714, Blast_Score=62, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017940
- InterPro:   IPR001140
- InterPro:   IPR011527
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00664 ABC_membrane; PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 26541; Mature: 26541

Theoretical pI: Translated: 10.78; Mature: 10.78

Prosite motif: PS50929 ABC_TM1F

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.2 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMRGNYLNRGGKGADRFQKGRRAQNFFPTIIRLFKYMRRDLWGLLFSILIASLSVILSVQ
CCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
APKILGNATTVIFDGVTKSLKNHTAIQIDMTKVESILLYVMVIYLISFISGILQQSIMTR
CCHHHCCHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ISQRTVYTLRREFKNKMKKLPVSYYDSHSNGDIMSRMINDMDNISGTLNQTLIQLITSLL
HHHHHHHHHHHHHHHHHHHCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QFVGTIYFMLTISWQLALVAFITVPLAMITVRIVAPLSQKFFAEQQKIWDY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MMRGNYLNRGGKGADRFQKGRRAQNFFPTIIRLFKYMRRDLWGLLFSILIASLSVILSVQ
CCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
APKILGNATTVIFDGVTKSLKNHTAIQIDMTKVESILLYVMVIYLISFISGILQQSIMTR
CCHHHCCHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ISQRTVYTLRREFKNKMKKLPVSYYDSHSNGDIMSRMINDMDNISGTLNQTLIQLITSLL
HHHHHHHHHHHHHHHHHHHCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QFVGTIYFMLTISWQLALVAFITVPLAMITVRIVAPLSQKFFAEQQKIWDY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10360571 [H]