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The map label for this gene is ycfH

Identifier: 15672242

GI number: 15672242

Start: 258588

End: 259001

Strand: Direct

Name: ycfH

Synonym: L58584

Alternate gene names: NA

Gene position: 258588-259001 (Clockwise)

Preceding gene: 15672241

Following gene: 15672243

Centisome position: 10.93

GC content: 42.75

Gene sequence:

>414_bases
ATGAATGCAATTGAACTTGTGCAAGGCGCCATGAAAAAAGCAGAGAAAATTCGTCCAAAAGTAGGTGGTTTTCCATACTT
GGCTGAATGTATGCGAGAAGCTGGAGTTTTAAAAAATGTTTGGACCCTTCCTGTCGGACAAAGCACGTTTTGGACAAGCG
CTGGCGTAATTAGTGTGACCAATTCACCAATGGTGAGTGGTTTTCATGAGGTGCCAGTTTTTGACCAAGAAGCTTTGATT
AAGGCCTTGCGGGCTGATCAAGCTGGACAAACGACTTTTCCAGAATTCTTGAGTGCCACTTGGGAAGCTGGTGTGATTTC
TTATGAAGCTGATTTTTCAGAAAGAAAAGTCACTTATCTAGGAAGTCAAGGAGAAAGCTATGTTGAGGCCTATCCAGCGG
TCGAAATTCATTAA

Upstream 100 bases:

>100_bases
AAAAAAATTACTGACGAAAATTTCAGTCCTCCGTCAGCATTTTTTTCTTAGAATTTTTGTTATAATTAATCATCAAAATA
AATGAAGATGAGGTCAAAAG

Downstream 100 bases:

>100_bases
AAAGTTACTGACAGAATGATTAAAATATTTGGTAAAATTATTTACTAAATTAATCATTCTGTCAGTAACTTTTCTGTTAA
TTTCTGATAAAAGTGCTATA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 137; Mature: 137

Protein sequence:

>137_residues
MNAIELVQGAMKKAEKIRPKVGGFPYLAECMREAGVLKNVWTLPVGQSTFWTSAGVISVTNSPMVSGFHEVPVFDQEALI
KALRADQAGQTTFPEFLSATWEAGVISYEADFSERKVTYLGSQGESYVEAYPAVEIH

Sequences:

>Translated_137_residues
MNAIELVQGAMKKAEKIRPKVGGFPYLAECMREAGVLKNVWTLPVGQSTFWTSAGVISVTNSPMVSGFHEVPVFDQEALI
KALRADQAGQTTFPEFLSATWEAGVISYEADFSERKVTYLGSQGESYVEAYPAVEIH
>Mature_137_residues
MNAIELVQGAMKKAEKIRPKVGGFPYLAECMREAGVLKNVWTLPVGQSTFWTSAGVISVTNSPMVSGFHEVPVFDQEALI
KALRADQAGQTTFPEFLSATWEAGVISYEADFSERKVTYLGSQGESYVEAYPAVEIH

Specific function: Unknown

COG id: COG5562

COG function: function code R; Phage envelope protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15007; Mature: 15007

Theoretical pI: Translated: 4.71; Mature: 4.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAIELVQGAMKKAEKIRPKVGGFPYLAECMREAGVLKNVWTLPVGQSTFWTSAGVISVT
CCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCCEEEEC
NSPMVSGFHEVPVFDQEALIKALRADQAGQTTFPEFLSATWEAGVISYEADFSERKVTYL
CCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHCCCEEEEECCCCCCEEEEE
GSQGESYVEAYPAVEIH
CCCCCHHHHHCCCEECC
>Mature Secondary Structure
MNAIELVQGAMKKAEKIRPKVGGFPYLAECMREAGVLKNVWTLPVGQSTFWTSAGVISVT
CCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCCEEEEC
NSPMVSGFHEVPVFDQEALIKALRADQAGQTTFPEFLSATWEAGVISYEADFSERKVTYL
CCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHCCCEEEEECCCCCCEEEEE
GSQGESYVEAYPAVEIH
CCCCCHHHHHCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]