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The map label for this gene is yccH

Identifier: 15672208

GI number: 15672208

Start: 227007

End: 227597

Strand: Direct

Name: yccH

Synonym: L26998

Alternate gene names: 15672208

Gene position: 227007-227597 (Clockwise)

Preceding gene: 15672207

Following gene: 15672209

Centisome position: 9.6

GC content: 37.06

Gene sequence:

>591_bases
ATGTTTGACTTTTATCCAGAAGTGAATTTATCAAGAGAGGATTTGTTAGCGAAAATTGCTAGCATGGTCAAAAAATCACG
TTTTGAACATATGCTCGGTGTGGAAAAAGCAGCGATTGCGTTAGCGCAAAAATATGAAGTTGACCCGCATAAAGCAAGTT
TAGCTGGACTTTTACATGACTATTGTAAAGAAGTGGATGATGAAACTTTTCTAGCCTTGATTGATAAATATGGCTTAGAT
TCTGATTTGAAAAATTGGGATAATAATATTTGGCATGGAAAAGTCGGAATTTATAAAATGCGTGAAGATTTCGGACTTGA
AGATGAAGAAGTTTTAAGGGCGATTGAGATTCATACGGTCGGAGATAAAGAAATGTCTGGTTTGGCTAAGGTGTTGTATG
TAGCAGATTACATTGAGGAAGGTCGAACATTTCCTGGGGTCATTGAAGCCCGTGCCGTTGCTAATCAAGATTTAAATCAA
GCAGTTGCTTTTGAAACCATGCGTTTGGTTGAGTATTTGGCAGAACGTCGTTTGACCATTTACCCTCAAACTTTTGAAGC
CTATAATGCTTTTATTGGTTATTTGTCTTGA

Upstream 100 bases:

>100_bases
ATTTCTGGAAATTTGATTCGGGAACAATTGCACCGTGGAATTAAACCACATTTTCTTTTGGCACCGAAGGTTTTAGATTA
CATTTTGAAAGAAGGCTTAT

Downstream 100 bases:

>100_bases
AATATCGTTAGAGATAAACTGCTTATTATGAACAGAGGAAAATGAATGATTAGAAAAGCTGAAATGAAAGATTATCTTGA
CATTGCTCGACTTTCTGGAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 196; Mature: 196

Protein sequence:

>196_residues
MFDFYPEVNLSREDLLAKIASMVKKSRFEHMLGVEKAAIALAQKYEVDPHKASLAGLLHDYCKEVDDETFLALIDKYGLD
SDLKNWDNNIWHGKVGIYKMREDFGLEDEEVLRAIEIHTVGDKEMSGLAKVLYVADYIEEGRTFPGVIEARAVANQDLNQ
AVAFETMRLVEYLAERRLTIYPQTFEAYNAFIGYLS

Sequences:

>Translated_196_residues
MFDFYPEVNLSREDLLAKIASMVKKSRFEHMLGVEKAAIALAQKYEVDPHKASLAGLLHDYCKEVDDETFLALIDKYGLD
SDLKNWDNNIWHGKVGIYKMREDFGLEDEEVLRAIEIHTVGDKEMSGLAKVLYVADYIEEGRTFPGVIEARAVANQDLNQ
AVAFETMRLVEYLAERRLTIYPQTFEAYNAFIGYLS
>Mature_196_residues
MFDFYPEVNLSREDLLAKIASMVKKSRFEHMLGVEKAAIALAQKYEVDPHKASLAGLLHDYCKEVDDETFLALIDKYGLD
SDLKNWDNNIWHGKVGIYKMREDFGLEDEEVLRAIEIHTVGDKEMSGLAKVLYVADYIEEGRTFPGVIEARAVANQDLNQ
AVAFETMRLVEYLAERRLTIYPQTFEAYNAFIGYLS

Specific function: Unknown

COG id: COG1713

COG function: function code H; Predicted HD superfamily hydrolase involved in NAD metabolism

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HD domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005249
- InterPro:   IPR003607 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22441; Mature: 22441

Theoretical pI: Translated: 4.55; Mature: 4.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFDFYPEVNLSREDLLAKIASMVKKSRFEHMLGVEKAAIALAQKYEVDPHKASLAGLLHD
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
YCKEVDDETFLALIDKYGLDSDLKNWDNNIWHGKVGIYKMREDFGLEDEEVLRAIEIHTV
HHHHCCCHHHHHHHHHHCCCHHHHHHCCCCEECCCHHEEEHHHCCCCHHHHHHHHHHHCC
GDKEMSGLAKVLYVADYIEEGRTFPGVIEARAVANQDLNQAVAFETMRLVEYLAERRLTI
CCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEE
YPQTFEAYNAFIGYLS
CCHHHHHHHHHHHCCC
>Mature Secondary Structure
MFDFYPEVNLSREDLLAKIASMVKKSRFEHMLGVEKAAIALAQKYEVDPHKASLAGLLHD
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
YCKEVDDETFLALIDKYGLDSDLKNWDNNIWHGKVGIYKMREDFGLEDEEVLRAIEIHTV
HHHHCCCHHHHHHHHHHCCCHHHHHHCCCCEECCCHHEEEHHHCCCCHHHHHHHHHHHCC
GDKEMSGLAKVLYVADYIEEGRTFPGVIEARAVANQDLNQAVAFETMRLVEYLAERRLTI
CCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEE
YPQTFEAYNAFIGYLS
CCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]