Definition | Lactococcus lactis subsp. lactis Il1403, complete genome. |
---|---|
Accession | NC_002662 |
Length | 2,365,589 |
Click here to switch to the map view.
The map label for this gene is yqeL
Identifier: 15672203
GI number: 15672203
Start: 222972
End: 224117
Strand: Direct
Name: yqeL
Synonym: L22900
Alternate gene names: 15672203
Gene position: 222972-224117 (Clockwise)
Preceding gene: 15672202
Following gene: 15672204
Centisome position: 9.43
GC content: 39.79
Gene sequence:
>1146_bases TTGTACTGTATTGGTTGTGGTGCAAAAATTCAAACTGAGGCTAAAAATGCACTTGGCTTTTTGCCTGCGGGTGCTTTGAA GAAAAAAATAGCTGAACGCGACCAAATGGAAGCTGTTCAGGCTGGAGATGAGGGAAGCGAAGCTTCTATCAAAACTGAGG ATTTATACTGTCAGCGTTGTTTCCGTTTGCGCCATTATAATGAGATTGCACCGACAAGTTTGACGGATGCAGATTTTTTG CGTTTACTTAAAGAAATTGGTCAACATGACGCTTTGATTGTCAATGTGGTTGATATTTTTGACTTTAACGGCTCTTTGAT TCCTAACCTTCATAAATTGACTGGTGGAAATGATTTACTCATGGTTGCCAATAAACGTGATGTTTTACCAAAATCACTAA AAGTTGGGAAATTAACTGCTTGGTTGAGAGAACAAGCGGCTTCACGTTCGCTTAAACCTAAAGATATTTTAGTGACTTCA GCTCAAAATAAAGATGATGTGGCTGAGTTAATGGAAGCTATTGAATACTATCGTCGTGGGCGTGATGTCTATGTGGTTGG GGTAACGAATGTTGGTAAATCAACTTTGATTAATGCAATTATTAAATCAGCTTCAGGTTCTGAGGATGTGATTACAACTT CACGTTTCCCTGGGACAACTCTTGATAAGATTGAAATTCCGCTTGATGAAGATTCGGCATTGATTGACACACCAGGGATT ATTCACCGTGGGCAAATAGCTCATTATTTGGAACCAGAAGATTTGAAATATGTGTCACCGCGTAAAGAAATTAAACCGAA AACTTATCAGCTCGATCCTGAACAAACATTGTTCTTTGGTGGTTTGGCACGTTTTGATTTTATCAGTGGTGAACGTCAAG GAATGACGGCTTATTTTGACAATGAAATCAATGTTCATCGGACGAAACTTGAAGGTGCGACTGAATTTTATGAAAAGCAT AAAGGAGAACTTTTGGCTCCTGCTTTAGTTGGTGCCAAATTGGTTCGTCGTGAGTTTAAAATTACTGACAAATCGGATAT TGTCTTTTCTGGTCTTGGCTGGGTTCGTGTGCCGCAAAAAGCAGTTGTTGCAGCTTGGGTGCCAGAAGGTGTGGATGTAG TTGTTCGTAAGGCTTTGATTGGGTAA
Upstream 100 bases:
>100_bases GATAAAAATAGGTCTTTTATTATAGGAAAAAAGGCTAAAAATGCTGTTGAAATGTGGTATAATAAGCAATATGATTGAAA ATGAAAATACAATGGAAGAT
Downstream 100 bases:
>100_bases AAAATATTCACAGTTTGTCTTGTGACATTACTGACAGAATTTCTGTCAGTAAAATCTTGGAGGATTAAAAAGGAAGAGAC TAGTCAGGATATTGGTTTTA
Product: GTP-binding protein YqeH
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 381; Mature: 381
Protein sequence:
>381_residues MYCIGCGAKIQTEAKNALGFLPAGALKKKIAERDQMEAVQAGDEGSEASIKTEDLYCQRCFRLRHYNEIAPTSLTDADFL RLLKEIGQHDALIVNVVDIFDFNGSLIPNLHKLTGGNDLLMVANKRDVLPKSLKVGKLTAWLREQAASRSLKPKDILVTS AQNKDDVAELMEAIEYYRRGRDVYVVGVTNVGKSTLINAIIKSASGSEDVITTSRFPGTTLDKIEIPLDEDSALIDTPGI IHRGQIAHYLEPEDLKYVSPRKEIKPKTYQLDPEQTLFFGGLARFDFISGERQGMTAYFDNEINVHRTKLEGATEFYEKH KGELLAPALVGAKLVRREFKITDKSDIVFSGLGWVRVPQKAVVAAWVPEGVDVVVRKALIG
Sequences:
>Translated_381_residues MYCIGCGAKIQTEAKNALGFLPAGALKKKIAERDQMEAVQAGDEGSEASIKTEDLYCQRCFRLRHYNEIAPTSLTDADFL RLLKEIGQHDALIVNVVDIFDFNGSLIPNLHKLTGGNDLLMVANKRDVLPKSLKVGKLTAWLREQAASRSLKPKDILVTS AQNKDDVAELMEAIEYYRRGRDVYVVGVTNVGKSTLINAIIKSASGSEDVITTSRFPGTTLDKIEIPLDEDSALIDTPGI IHRGQIAHYLEPEDLKYVSPRKEIKPKTYQLDPEQTLFFGGLARFDFISGERQGMTAYFDNEINVHRTKLEGATEFYEKH KGELLAPALVGAKLVRREFKITDKSDIVFSGLGWVRVPQKAVVAAWVPEGVDVVVRKALIG >Mature_381_residues MYCIGCGAKIQTEAKNALGFLPAGALKKKIAERDQMEAVQAGDEGSEASIKTEDLYCQRCFRLRHYNEIAPTSLTDADFL RLLKEIGQHDALIVNVVDIFDFNGSLIPNLHKLTGGNDLLMVANKRDVLPKSLKVGKLTAWLREQAASRSLKPKDILVTS AQNKDDVAELMEAIEYYRRGRDVYVVGVTNVGKSTLINAIIKSASGSEDVITTSRFPGTTLDKIEIPLDEDSALIDTPGI IHRGQIAHYLEPEDLKYVSPRKEIKPKTYQLDPEQTLFFGGLARFDFISGERQGMTAYFDNEINVHRTKLEGATEFYEKH KGELLAPALVGAKLVRREFKITDKSDIVFSGLGWVRVPQKAVVAAWVPEGVDVVVRKALIG
Specific function: Binds GTP and GDP [H]
COG id: COG1161
COG function: function code R; Predicted GTPases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 G (guanine nucleotide-binding) domain [H]
Homologues:
Organism=Homo sapiens, GI14150078, Length=165, Percent_Identity=30.9090909090909, Blast_Score=73, Evalue=5e-13, Organism=Caenorhabditis elegans, GI17537249, Length=251, Percent_Identity=29.0836653386454, Blast_Score=81, Evalue=8e-16, Organism=Drosophila melanogaster, GI28573544, Length=241, Percent_Identity=26.9709543568465, Blast_Score=87, Evalue=1e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019988 - InterPro: IPR002917 [H]
Pfam domain/function: PF01926 MMR_HSR1 [H]
EC number: NA
Molecular weight: Translated: 42248; Mature: 42248
Theoretical pI: Translated: 6.88; Mature: 6.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYCIGCGAKIQTEAKNALGFLPAGALKKKIAERDQMEAVQAGDEGSEASIKTEDLYCQRC CEEEECCCEEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEHHHHHHHHH FRLRHYNEIAPTSLTDADFLRLLKEIGQHDALIVNVVDIFDFNGSLIPNLHKLTGGNDLL HHHHHCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEEEEECCCCCCCCCHHHHCCCCEEE MVANKRDVLPKSLKVGKLTAWLREQAASRSLKPKDILVTSAQNKDDVAELMEAIEYYRRG EEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHHHCC RDVYVVGVTNVGKSTLINAIIKSASGSEDVITTSRFPGTTLDKIEIPLDEDSALIDTPGI CCEEEEEECCCCHHHHHHHHHHCCCCCCCEEEECCCCCCCCCEEECCCCCCCCEECCCCC IHRGQIAHYLEPEDLKYVSPRKEIKPKTYQLDPEQTLFFGGLARFDFISGERQGMTAYFD EECCCEEECCCCCCCEECCCHHHCCCCCEECCCCCEEEECCHHHHHCCCCCCCCCEEEEC NEINVHRTKLEGATEFYEKHKGELLAPALVGAKLVRREFKITDKSDIVFSGLGWVRVPQK CCCEEEEEECCCHHHHHHHHCCCEEHHHHHHHHHHHHHHCCCCCCCEEEECCCCEECCCH AVVAAWVPEGVDVVVRKALIG HEEEEECCCCHHHHHHHHHCC >Mature Secondary Structure MYCIGCGAKIQTEAKNALGFLPAGALKKKIAERDQMEAVQAGDEGSEASIKTEDLYCQRC CEEEECCCEEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEHHHHHHHHH FRLRHYNEIAPTSLTDADFLRLLKEIGQHDALIVNVVDIFDFNGSLIPNLHKLTGGNDLL HHHHHCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEEEEECCCCCCCCCHHHHCCCCEEE MVANKRDVLPKSLKVGKLTAWLREQAASRSLKPKDILVTSAQNKDDVAELMEAIEYYRRG EEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHHHCC RDVYVVGVTNVGKSTLINAIIKSASGSEDVITTSRFPGTTLDKIEIPLDEDSALIDTPGI CCEEEEEECCCCHHHHHHHHHHCCCCCCCEEEECCCCCCCCCEEECCCCCCCCEECCCCC IHRGQIAHYLEPEDLKYVSPRKEIKPKTYQLDPEQTLFFGGLARFDFISGERQGMTAYFD EECCCEEECCCCCCCEECCCHHHCCCCCEECCCCCEEEECCHHHHHCCCCCCCCCEEEEC NEINVHRTKLEGATEFYEKHKGELLAPALVGAKLVRREFKITDKSDIVFSGLGWVRVPQK CCCEEEEEECCCHHHHHHHHCCCEEHHHHHHHHHHHHHHCCCCCCCEEEECCCCEECCCH AVVAAWVPEGVDVVVRKALIG HEEEEECCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377 [H]