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The map label for this gene is ycbH

Identifier: 15672197

GI number: 15672197

Start: 216713

End: 217714

Strand: Direct

Name: ycbH

Synonym: L16653

Alternate gene names: 15672197

Gene position: 216713-217714 (Clockwise)

Preceding gene: 15672196

Following gene: 15672198

Centisome position: 9.16

GC content: 30.84

Gene sequence:

>1002_bases
ATGAAATTTAGTGTAATAATACCAGTATACAACGCTTCTAAGTTTATTGATTATTGTGTTGAATCAGTATTGAGTCAATC
TTATTCAGATATAGAAGTTATCCTTATAAATGATGGTTCGACAGATAAATCAGGAGAAATTTGTGAGGGGTTCGCTAGAA
AAGATAATCGAGTGAAAGTCTATCATCAAGAAAATCAAGGTGCAGCTGTCGCTAGAAATCATGGAATTCGTAAAGCAACA
GGTGATTATCTACTATTTCCTGATAGTGATGACTATTATGCCTCTTCTCTCGGCTTTGAAGAAATTAATAATCAATTAGA
AGAAACCAAAGCGGACGTTTTAATTCATGACTCTTTTGTTGAAAGAGGTAATGGAACTCCCGATGATTTGCATTCTTCTC
TTTTAAGAGAAGAAGTTTTAAAGCTAGAGAAAATAGAGTTTATAGAGTATTTAATTAAAAAAGATAAATTAACACGTTCA
GCATGGACGAAAGTAATAAGTAGAAGTTTTCTATCTAAAAATAATATTTTATTTCCTACTGTAAGACAAACAGAAGATAC
AGGTTTCACTGCAGAGCTTGTTAGACTAGGGAATTCTTTTGATTGGTATGAGAAACAATTTTATGCTTATGTAAAACACG
ATGAAAGTGTTACTGCAAAAAGACTCCCAGAATCAATCATCCATGATTCATTTTCTGTTATTAAAACAGCGGTAATAAAT
GGAGAATTAATTAAAGATAGTAGATACCGAGAGGCTTATTATTCTTACCTTGCTTATCCTTACGTTGTTCTTATTGGACA
GACAAAAGAGGCAATCAATAGAGGGGTAATAAAAGAAAATACTATCTTAAATGATTTAAAACAATACTCATTTCTTATGA
AATATAATTTAAACCCCAAGCTGAAAGTTATAAAACACTTATATAAATTATTTGGTTATTTAATGATTGTCTTTCTTTTG
AGTGTAATGATGGAGCTAACATACCGAAAGCAAGGAGTATAA

Upstream 100 bases:

>100_bases
GAGGAATATTTAACTCGTCAATATGGTGATTACATGAAACTTCCACCAGAGAATGAGCGAGTTAATCACGATTATTATAA
ATGGTACTGGAAGGAAAAAA

Downstream 100 bases:

>100_bases
TATGACAACTACTTTAACAATTTTAACCCCAACATATAATAGAGCGTATATTCTCCCCAAGTTATATGCTAGTCTAGTTG
AGCAAACTAACAAACACTTT

Product: sugar transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 333; Mature: 333

Protein sequence:

>333_residues
MKFSVIIPVYNASKFIDYCVESVLSQSYSDIEVILINDGSTDKSGEICEGFARKDNRVKVYHQENQGAAVARNHGIRKAT
GDYLLFPDSDDYYASSLGFEEINNQLEETKADVLIHDSFVERGNGTPDDLHSSLLREEVLKLEKIEFIEYLIKKDKLTRS
AWTKVISRSFLSKNNILFPTVRQTEDTGFTAELVRLGNSFDWYEKQFYAYVKHDESVTAKRLPESIIHDSFSVIKTAVIN
GELIKDSRYREAYYSYLAYPYVVLIGQTKEAINRGVIKENTILNDLKQYSFLMKYNLNPKLKVIKHLYKLFGYLMIVFLL
SVMMELTYRKQGV

Sequences:

>Translated_333_residues
MKFSVIIPVYNASKFIDYCVESVLSQSYSDIEVILINDGSTDKSGEICEGFARKDNRVKVYHQENQGAAVARNHGIRKAT
GDYLLFPDSDDYYASSLGFEEINNQLEETKADVLIHDSFVERGNGTPDDLHSSLLREEVLKLEKIEFIEYLIKKDKLTRS
AWTKVISRSFLSKNNILFPTVRQTEDTGFTAELVRLGNSFDWYEKQFYAYVKHDESVTAKRLPESIIHDSFSVIKTAVIN
GELIKDSRYREAYYSYLAYPYVVLIGQTKEAINRGVIKENTILNDLKQYSFLMKYNLNPKLKVIKHLYKLFGYLMIVFLL
SVMMELTYRKQGV
>Mature_333_residues
MKFSVIIPVYNASKFIDYCVESVLSQSYSDIEVILINDGSTDKSGEICEGFARKDNRVKVYHQENQGAAVARNHGIRKAT
GDYLLFPDSDDYYASSLGFEEINNQLEETKADVLIHDSFVERGNGTPDDLHSSLLREEVLKLEKIEFIEYLIKKDKLTRS
AWTKVISRSFLSKNNILFPTVRQTEDTGFTAELVRLGNSFDWYEKQFYAYVKHDESVTAKRLPESIIHDSFSVIKTAVIN
GELIKDSRYREAYYSYLAYPYVVLIGQTKEAINRGVIKENTILNDLKQYSFLMKYNLNPKLKVIKHLYKLFGYLMIVFLL
SVMMELTYRKQGV

Specific function: May be involved in the production of the exopolysaccharide (EPS) component of the extracellular matrix during biofilm formation. EPS is responsible for the adhesion of chains of cells into bundles [H]

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

Organism=Escherichia coli, GI1790044, Length=220, Percent_Identity=34.0909090909091, Blast_Score=114, Evalue=7e-27,
Organism=Escherichia coli, GI1787259, Length=88, Percent_Identity=39.7727272727273, Blast_Score=70, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 38464; Mature: 38464

Theoretical pI: Translated: 6.89; Mature: 6.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFSVIIPVYNASKFIDYCVESVLSQSYSDIEVILINDGSTDKSGEICEGFARKDNRVKV
CCEEEEEEECCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCHHHHHHHCCCCCEEE
YHQENQGAAVARNHGIRKATGDYLLFPDSDDYYASSLGFEEINNQLEETKADVLIHDSFV
EEECCCCCCHHHCCCCCCCCCCEEEECCCCCHHHHHCCHHHHHHHHHHHHHHEEEEHHHH
ERGNGTPDDLHSSLLREEVLKLEKIEFIEYLIKKDKLTRSAWTKVISRSFLSKNNILFPT
HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECC
VRQTEDTGFTAELVRLGNSFDWYEKQFYAYVKHDESVTAKRLPESIIHDSFSVIKTAVIN
CCCCCCCCHHHHHHHHCCCCCHHHHHHHHHEECCCCHHHHHCHHHHHHHHHHHHHHHHHC
GELIKDSRYREAYYSYLAYPYVVLIGQTKEAINRGVIKENTILNDLKQYSFLMKYNLNPK
CHHHCCHHHHHHHHHHHHCCCEEEECCCHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCH
LKVIKHLYKLFGYLMIVFLLSVMMELTYRKQGV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKFSVIIPVYNASKFIDYCVESVLSQSYSDIEVILINDGSTDKSGEICEGFARKDNRVKV
CCEEEEEEECCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCHHHHHHHCCCCCEEE
YHQENQGAAVARNHGIRKATGDYLLFPDSDDYYASSLGFEEINNQLEETKADVLIHDSFV
EEECCCCCCHHHCCCCCCCCCCEEEECCCCCHHHHHCCHHHHHHHHHHHHHHEEEEHHHH
ERGNGTPDDLHSSLLREEVLKLEKIEFIEYLIKKDKLTRSAWTKVISRSFLSKNNILFPT
HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECC
VRQTEDTGFTAELVRLGNSFDWYEKQFYAYVKHDESVTAKRLPESIIHDSFSVIKTAVIN
CCCCCCCCHHHHHHHHCCCCCHHHHHHHHHEECCCCHHHHHCHHHHHHHHHHHHHHHHHC
GELIKDSRYREAYYSYLAYPYVVLIGQTKEAINRGVIKENTILNDLKQYSFLMKYNLNPK
CHHHCCHHHHHHHHHHHHCCCEEEECCCHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCH
LKVIKHLYKLFGYLMIVFLLSVMMELTYRKQGV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969506; 9384377 [H]