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The map label for this gene is parA

Identifier: 15672078

GI number: 15672078

Start: 98429

End: 99214

Strand: Reverse

Name: parA

Synonym: L0210

Alternate gene names: 15672078

Gene position: 99214-98429 (Counterclockwise)

Preceding gene: 15672079

Following gene: 15672076

Centisome position: 4.19

GC content: 32.95

Gene sequence:

>786_bases
ATGGTAGAACAAATCACTCAACTTAAGTTGTCAACAATTGTAAAAAACCCTTACCAGCCTCGTCTTGTTTTTGATGAGGA
TAAATTAAAAGAATTGGCTAATTCTATCCAAGAAAATGGCGTTTTACAACCCATAATCGTTCGTAAATCAAAACTTGTTG
GCTATGAGCTTTTAGCAGGTGAACGTCGGTTTCAAGCTTCAAAATTAGCTGGTTTAGAAACTATACCAGCAATTATTAGA
AGCTATTCTGATGAAGAAATGATGACTCTCTCAATTTTAGAAAATTTGCAGAGAGAAAATCTCAATCCACTAGAAGAGTC
CAAAAGCTTGGCACAACTGGCTGACAAATTGGGAATGACCCACGATCAAATCGCTAAGGCCCTTGGAAAATCAAGGTCTT
ATGTCTCTAATCTTATTCGTTTACTTGGTTTGCCTGACACAATTTTGAAGCATGTTGAAAATCGAGATATTTCACCTGCT
CACGCTAGAACACTTTTAGCTGAAAAAAATCCTAAAAAGCAATTAGAGCTCGTTGATAAAATAATTAAAGAGCAGCTCAA
TGTCAGAGCACTTGAAGCTATTATTTATGGTGAAGAAAAATTTACTGACAAATCTATCAGTAAATTAAATATCAATCTTT
TTACTGACGAAACTGAAAAAGAACTGATGAAAAAATTGGGAAATAGGGTTAAGATTCAAGCAAATAAAAAATATCAAGGG
AATTTATCCATTCACTTTGATAATCTTGATGAACTAGAACATCTAATAAAATTACTAAAAAAATAA

Upstream 100 bases:

>100_bases
CCACAGTCGTAAAGAATGGATTGATGAACAAAAAAAGAGGAGCTGACAAATCTGTCAGTAAATAGAGCACAATAAAATTT
ACTGACAGAAAGTGAAAAAT

Downstream 100 bases:

>100_bases
AAAAAATTTACTGACAGAGTACTTTTAAGCATTCCGTCAGTAAATTTTTTCTTTATCCTCTTAAAGCTCGAAGCGCATAG
AGAATTGAAACAACATCAAT

Product: chromosome partitioning protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 261; Mature: 261

Protein sequence:

>261_residues
MVEQITQLKLSTIVKNPYQPRLVFDEDKLKELANSIQENGVLQPIIVRKSKLVGYELLAGERRFQASKLAGLETIPAIIR
SYSDEEMMTLSILENLQRENLNPLEESKSLAQLADKLGMTHDQIAKALGKSRSYVSNLIRLLGLPDTILKHVENRDISPA
HARTLLAEKNPKKQLELVDKIIKEQLNVRALEAIIYGEEKFTDKSISKLNINLFTDETEKELMKKLGNRVKIQANKKYQG
NLSIHFDNLDELEHLIKLLKK

Sequences:

>Translated_261_residues
MVEQITQLKLSTIVKNPYQPRLVFDEDKLKELANSIQENGVLQPIIVRKSKLVGYELLAGERRFQASKLAGLETIPAIIR
SYSDEEMMTLSILENLQRENLNPLEESKSLAQLADKLGMTHDQIAKALGKSRSYVSNLIRLLGLPDTILKHVENRDISPA
HARTLLAEKNPKKQLELVDKIIKEQLNVRALEAIIYGEEKFTDKSISKLNINLFTDETEKELMKKLGNRVKIQANKKYQG
NLSIHFDNLDELEHLIKLLKK
>Mature_261_residues
MVEQITQLKLSTIVKNPYQPRLVFDEDKLKELANSIQENGVLQPIIVRKSKLVGYELLAGERRFQASKLAGLETIPAIIR
SYSDEEMMTLSILENLQRENLNPLEESKSLAQLADKLGMTHDQIAKALGKSRSYVSNLIRLLGLPDTILKHVENRDISPA
HARTLLAEKNPKKQLELVDKIIKEQLNVRALEAIIYGEEKFTDKSISKLNINLFTDETEKELMKKLGNRVKIQANKKYQG
NLSIHFDNLDELEHLIKLLKK

Specific function: Required for the initiation of sporulation and for normal chromosome segregation. Antagonizes sporulation inhibition of soj. It probably interacts with a specific DNA site and other proteins involved in partitioning and cell division, and antagonizes soj

COG id: COG1475

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the parB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004437
- InterPro:   IPR003115
- InterPro:   IPR013741 [H]

Pfam domain/function: PF08535 KorB; PF02195 ParBc [H]

EC number: NA

Molecular weight: Translated: 29804; Mature: 29804

Theoretical pI: Translated: 9.59; Mature: 9.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVEQITQLKLSTIVKNPYQPRLVFDEDKLKELANSIQENGVLQPIIVRKSKLVGYELLAG
CCHHHHHHHHHHHHCCCCCCCEEECHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHC
ERRFQASKLAGLETIPAIIRSYSDEEMMTLSILENLQRENLNPLEESKSLAQLADKLGMT
CHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCC
HDQIAKALGKSRSYVSNLIRLLGLPDTILKHVENRDISPAHARTLLAEKNPKKQLELVDK
HHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHH
IIKEQLNVRALEAIIYGEEKFTDKSISKLNINLFTDETEKELMKKLGNRVKIQANKKYQG
HHHHHHHHHHHHHHHHCCHHHCCCCHHHEEEEEECCHHHHHHHHHHCCEEEEEECCCEEC
NLSIHFDNLDELEHLIKLLKK
CEEEEECCHHHHHHHHHHHCC
>Mature Secondary Structure
MVEQITQLKLSTIVKNPYQPRLVFDEDKLKELANSIQENGVLQPIIVRKSKLVGYELLAG
CCHHHHHHHHHHHHCCCCCCCEEECHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHC
ERRFQASKLAGLETIPAIIRSYSDEEMMTLSILENLQRENLNPLEESKSLAQLADKLGMT
CHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCC
HDQIAKALGKSRSYVSNLIRLLGLPDTILKHVENRDISPAHARTLLAEKNPKKQLELVDK
HHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHH
IIKEQLNVRALEAIIYGEEKFTDKSISKLNINLFTDETEKELMKKLGNRVKIQANKKYQG
HHHHHHHHHHHHHHHHCCHHHCCCCHHHEEEEEECCHHHHHHHHHHCCEEEEEECCCEEC
NLSIHFDNLDELEHLIKLLKK
CEEEEECCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7584024; 1552862; 9384377; 1900505; 8071208 [H]